GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:42:19

Sequence gi568815596f:86342048_86592116 : 250069 bp : 40.12% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5404   5664  261  0  0   57  -25   211 0.056   3.81
 1.02 Term +   8158   8469  312  0  0   29   43   250 0.140   8.62
 1.03 PlyA +   9382   9387    6                               1.05

 2.03 PlyA -   9980   9975    6                               1.05
 2.02 Term -  10340  10048  293  0  2   44   42   237 0.155   9.22
 2.01 Init -  13480  13366  115  1  1  101   38    79 0.148   4.63
 2.00 Prom -  13738  13699   40                              -9.15

 3.00 Prom +  13820  13859   40                             -11.04
 3.01 Init +  14191  14373  183  0  0   68  121   120 0.993  12.49
 3.02 Intr +  14478  14604  127  2  1   43  119    73 0.794   5.23
 3.03 Intr +  23120  23354  235  0  1  -12   37   156 0.091  -3.68
 3.04 Intr +  30822  30950  129  0  0   90   75    81 0.128   5.89
 3.05 Term +  33354  33414   61  0  1  142   47     8 0.366  -1.60
 3.06 PlyA +  33776  33781    6                               1.05

 4.00 Prom +  34327  34366   40                              -4.55
 4.01 Init +  43320  43380   61  2  1  103  100    54 0.216   8.02
 4.02 Intr +  57330  57510  181  1  1  -37   63   261 0.895   9.10
 4.03 Intr +  74148  74322  175  0  1   31   93   150 0.609   8.82
 4.04 Intr +  84443  84515   73  1  1   75   89    58 0.032   2.66
 4.05 Intr +  99643  99791  149  2  2   44   65    59 0.001  -1.77
 4.06 Intr +  99971 100186  216  1  0  114   87   229 0.005  23.18
 4.07 Intr + 107760 107915  156  2  0   95   73    82 0.986   6.69
 4.08 Intr + 109056 109166  111  2  0   97   98    33 0.965   4.86
 4.09 Intr + 113038 113140  103  0  1   97   71   110 0.999   9.03
 4.10 Intr + 114395 114519  125  0  2   95   88    82 0.913   8.28
 4.11 Intr + 114758 114830   73  1  1   54   83    59 0.863   0.06
 4.12 Intr + 114936 115024   89  1  2   60   76    93 0.931   4.07
 4.13 Intr + 118606 118784  179  0  2   66  110   114 0.626   9.20
 4.14 Intr + 119376 119415   40  0  1   56   76    10 0.356  -6.09
 4.15 Intr + 122006 122169  164  1  2  104   96   112 0.703  11.45
 4.16 Intr + 124325 124869  545  2  2   78  116   411 0.503  34.51
 4.17 Intr + 128157 128361  205  1  1   80   78   225 0.993  18.04
 4.18 Intr + 132729 132943  215  0  2  106   61   152 0.998  11.74
 4.19 Intr + 135785 135982  198  0  0  101   76   154 0.920  13.90
 4.20 Intr + 136561 136688  128  2  2   67   68    61 0.938   1.48
 4.21 Intr + 138120 138315  196  2  1   56   96   181 0.980  13.77
 4.22 Intr + 139883 140055  173  0  2   55   95    50 0.956   1.14
 4.23 Intr + 140411 140647  237  1  0   78   95   108 0.991   7.39
 4.24 Intr + 141223 141291   69  0  0   58   76    64 0.597   0.66
 4.25 Intr + 141940 142111  172  0  1   70   55   144 0.984   7.89
 4.26 Intr + 142895 142982   88  0  1   86   80    69 0.993   4.01
 4.27 Intr + 143682 143812  131  0  2   93   91   132 0.997  13.42
 4.28 Intr + 147109 147201   93  2  0   89   96     9 0.637   0.82
 4.29 Intr + 147271 147390  120  2  0   85   97   196 0.999  19.75
 4.30 Intr + 147473 147612  140  0  2  101   75   102 0.995   9.46
 4.31 Intr + 149094 149228  135  2  0  113   98    49 0.989   8.24
 4.32 Term + 149992 150072   81  0  0  105   33    78 0.959   0.71
 4.33 PlyA + 152131 152136    6                               1.05

 5.07 PlyA - 152270 152265    6                               1.05
 5.06 Term - 163902 163757  146  1  2  113   50   239 0.999  19.69
 5.05 Intr - 165546 165432  115  0  1   59   80   178 0.967  13.20
 5.04 Intr - 168432 168311  122  1  2   73   57   172 0.678  11.89
 5.03 Intr - 187350 187171  180  1  0   64   99   191 0.910  16.72
 5.02 Intr - 203285 202935  351  0  0    8   78   222 0.250   7.57
 5.01 Init - 214860 214794   67  0  1   72   68    97 0.572   7.39
 5.00 Prom - 248596 248557   40                              -1.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 220799 221098  300  1  0   38   43   263 0.905  11.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:86342048_86592116|GENSCAN_predicted_peptide_1|190_aa
MVEPGLQWLQTVNPHMTISQAGMKAEEAFLQCCPEAAHRLSLTFQRPEQSRVSSPPRFLA
KGNECTVTGLGHSFSLEYRATFPEHISAREGQHRHKWVNVHAGDGIHTVRLACKRQRDNK
GKILEGKQLKLREAKSDAEPTNGGARGGPEKLVHGTRSAKEEGRSLASLQAVIGIYSPFA
CLVRGYGQLD

>gi568815596f:86342048_86592116|GENSCAN_predicted_CDS_1|573_bp
atggttgagccagggcttcagtggctgcagacagtaaatcctcacatgaccatctctcag
gcaggaatgaaggcagaggaggctttccttcagtgctgcccggaggctgcccacagactt
tccctcacatttcagaggccagagcagagtcgagtgtcatcccctccacgattccttgca
aagggaaatgaatgtactgtgactggcttgggccactcattttccctcgagtatcgggcc
accttccctgagcacatttctgccagggaagggcagcatagacacaagtgggttaatgtc
catgctggagatgggattcatacagtcaggctggcctgcaaaaggcagagggacaataag
ggcaaaatccttgaaggcaaacagttaaaactcagagaagcaaaatctgatgcagagccc
acgaatgggggggccagaggggggcctgaaaagctggttcatgggactagatcagccaag
gaggaaggcaggtccctggcctctctgcaagcagtgataggcatctacagcccctttgcc
tgcttggtgaggggatatggtcagctggattaa

>gi568815596f:86342048_86592116|GENSCAN_predicted_peptide_2|135_aa
MATASGAPAYLEDCAKGAASLAPGSLIHVPKQVQFVCRADWMVPTHMEGDSSPLSPLTHM
PVFSGNTLTDTPRSNALPAISSQASTSTITGNDQRQRTTLQQCQASNGSTSDLGYPRREQ
SRGSWTFECQRPVKL

>gi568815596f:86342048_86592116|GENSCAN_predicted_CDS_2|408_bp
atggccactgccagtggtgcacctgcgtatcttgaggactgtgccaaaggagctgcctcc
ctggctcccggctccctcatccacgtgccaaagcaggtccagtttgtctgcagagctgat
tggatggtgcccacccacatggagggtgactcttccccactgagtccactgactcacatg
ccagtcttctcaggaaacaccctcacagacacacccagaagcaacgctttaccagcaatc
tccagtcaagccagcacctcaaccatcacagggaacgaccaaagacaacgcacaacccta
caacaatgtcaagcttccaatggatccacctctgatctaggatacccaaggagagaacag
agcaggggctcctggacttttgaatgtcaaagaccagtgaagctttaa

>gi568815596f:86342048_86592116|GENSCAN_predicted_peptide_3|244_aa
MGKKLCQSLTTSHLDEGCPAGKAGTLCHGARHTPGSAVIELKEGAGPGGAGAGPDAVPAN
KMVSCGPLKQKHPGKGILGNVAQPNQVDRLQSHFEFAVSCLKTVSRVLIRAGKDTQRHIQ
GRRPCDDGDRDASNAAAGQGMPRIAGNCQKPGEGHTRDSPSEPPEAANPANTLILYFWPL
ELADALISQLLRILVADQYPLGIALAVGNWPPGGSSPHIVSDWLRVLLCCPGCGVAVRSV
TVRT

>gi568815596f:86342048_86592116|GENSCAN_predicted_CDS_3|735_bp
atgggcaagaaactgtgtcagtcactcaccacctcccaccttgatgaagggtgtcctgca
ggaaaagctggtaccctttgtcatggagctagacacacacctggctcagcagtcatagaa
ctgaaggaaggagcagggccagggggagcaggtgcaggcccggacgccgtccccgccaac
aagatggtctcctgtggcccactgaagcagaaacatccagggaaggggattctgggaaat
gtagctcagcccaaccaagtggaccgattacaaagccactttgaatttgcagtttcatgt
ctaaaaactgtatctagggtccttataagagcaggaaaagacacacagagacacatccaa
ggaagaagaccatgtgatgatggagacagagatgcgagtaatgcagctgcaggccaggga
atgccaaggattgctggcaattgccagaagccaggagaggggcacacaagagattctccc
tcagagcctccagaagccgccaaccctgccaacaccttgattttgtacttctggcctctg
gaactggcagatgcactcatctctcagctgctgagaatactggttgctgaccagtatcca
ctgggaattgccctggctgtggggaattggcccccgggtgggagcagtccacacatagtc
agtgactggctgagggtcttgctctgttgcccaggctgcggtgtagcagtgcggagtgta
acagtgcgaacatga

>gi568815596f:86342048_86592116|GENSCAN_predicted_peptide_4|1606_aa
MPTGMAHLCPLPLRPPGQLQVTGGSTWSQRKKQRRSIRENADTGECRVALKSFGRRVAHG
VKCEEEPEKESLKPNWKVSARSLILMQKEPSTESGGKQNLPQKVPGGGGLEAQWFVVKAK
GAMCPRHVTIPAQQEVTRKPCLVMFNVPKWILDNTNREKGKESGAFSFRGWGLSTFKSTR
AADNFSLTPSAVAFELLEKPNLGERGSRGAGARGGALPAGVETMVLTLGESWPVLVGRRF
LSLSAADGSDGSHDSWDVERVAEWPWLSGTIRAVSHTDVTKKDLKVCVEFDGESWRKRRW
IEVYSLLRRAFLVEHNLVLAERKSPEISERIVQWPAITYKPLLDKAGLGSITSVRFLGDQ
QRVFLSKDLLKPIQDVNSLRLSLTDNQIVSKEFQALIVKHLDESHLLKGDKNLVGSEVKI
YSLDPSTQWFSATVINGNPASKTLQVNCEEIPALKIVDPSLIHVEVVHDNLVTCGNSARI
GAVKRKSSENNGTLVSKQAKSCSETIPQSYDVAWLVGKESAEECEPAVSFLEFYHTLNYI
ISVCWQGGTIAMTGIEDLQGKLFSYLEMLHANSIHSLASPSMCPVQSVPTTVFKEILLGC
TAATPPSKDPRQQSTPQAANSPPNLGAKIPQGCHKQSLPEEISSCLNTKSEALRTKPDVC
KAGLLSKSSQIGTGDLKILTEPKGSCTQPKTNTDQENRLESVPQALTGLPKECLPTKASS
KAELEIANPPELQKHLEHAPSPSDVSNAPEVKAGVNSDSPNNCSGKKVEPSALACRSQNL
KESSVKVDNESCCSRSNNKIQNGECFSISLLVEAPSRKSVLTDPAKLKKLQQSGEAFVQD
DSCVNIVAQLPKCRECRLDSLRKDKEQQKDSPVFCRFFHFRRLQFNKHGVLRVEGFLTPN
KYDNEAIGLWLPLTKNVVGIDLDTAKYILANIGDHFCQMVISEKEAMSTIEPHKALSFQR
LSDLLIFAGQVAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQA
LYDVGDIVHSVRAKWGIKANCPCSNRQFKLFSKPASKEDLKQTSLAGEKPTLGAVLQQNP
SVLEPAAVGGEAASKPAGSMKPACPASTSPLNWLADLTSGNVNKENKEKQPTMPILKNEI
KCLPPLPPLSKSSTVLHTFNSTILTPVSNNNSGFLRNLLNSSTGKTENGLKNTPKILDDI
FASLVQNKTTSDLSKRPQGLTIKPSILGFDTPHYWLCDNRLLCLQDPNNKSNWNVFRECW
KQGQIGSLLKEHSALGQEFGRIAKQKDPVMVSGVHHKLNSELWKPESFRKEFGEQEVDLV
NCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMA
NIPLPEYTRRDGKLNLASRLPNYFVRPDLGPKMYNAYAHRLVKEFFCNNLIQNFYSQQKS
QSGTYHPPGLITPEDRKYGTTNLHLDVSDAANVMVYVGIPKGQCEQEEEVLKTIQDGDSD
ELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVHNLYSCIKVAEDFVSPEHVKHCFW
LTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLKASESSFGKP

>gi568815596f:86342048_86592116|GENSCAN_predicted_CDS_4|4821_bp
atgcccacgggaatggcccatctgtgtcctctgcccctgaggcctcctgggcagctgcaa
gtgactggaggaagtacttggagccagagaaagaagcagagaaggagcatcagagagaat
gcagacactggagaatgccgtgtcgcattaaagagctttggaaggagagtggcccatggt
gtcaaatgtgaagaggagcctgagaaggagtccctgaagccaaactggaaagtctctgct
agatccttgatccttatgcaaaaggagcccagcactgagtccggtggcaaacagaatctt
cctcaaaaagtgccagggggaggaggactggaggcccagtggtttgtggtgaaagccaag
ggggcaatgtgccctagacatgttaccatccctgcccaacaggaagtcacaaggaagcca
tgcctggtcatgttcaatgtgccgaaatggatcctggacaacacaaacagagaaaaaggc
aaggaatcaggggccttttcttttcggggctgggggctgagcactttcaaatccactcga
gccgcagataatttttccctcactccctctgcggttgcgtttgagctgttagaaaagcca
aacttgggagagcgagggtcacgcggcgctggggcccggggaggagctcttcctgcaggc
gtggaaaccatggtgctcacgctcggagaaagttggccggtattggtggggaggaggttt
ctcagtctgtccgcagccgacggcagcgatggcagccacgacagctgggacgtggagcgc
gtcgccgagtggccctggctctccgggaccattcgagctgtttcccacaccgacgttacc
aagaaggatctgaaggtgtgtgtggaatttgatggggaatcttggaggaaaagaagatgg
atagaagtctacagccttctaaggagagcatttttagtagaacataatttggttttagct
gaacgaaagtcacctgaaatttctgaacgaattgtacagtggcctgcaataacgtacaaa
cctctgttggacaaagctggtttgggatccataacttctgttcgctttctgggagatcaa
caaagagtatttctttctaaagaccttttgaagcctatacaggatgtaaacagtcttcga
ctttctcttacggataatcagattgtcagtaaagaatttcaagctttgattgtgaagcat
ttagatgaaagccatcttttaaaaggtgacaaaaacttagttggttcagaagtaaaaatt
tatagcttggacccatctactcagtggttttcagcaaccgttataaatggaaacccagca
tcaaaaactcttcaagtcaactgtgaggagattccagcactgaaaattgttgatccgtca
ctgattcatgttgaagttgtacacgataaccttgtgacatgtggtaattctgcaagaatt
ggagctgtaaaacgcaagtcttctgagaataatggaaccctggtttccaaacaagcaaaa
tcttgctctgagactattcctcagagttacgacgttgcctggttagttgggaaagagtct
gctgaggaatgtgagccggcagtgtcctttttagaattctatcatacactcaattatatt
atctccgtctgctggcagggaggaactattgccatgactggtatagaagaccttcaggga
aaactcttcagctatttagaaatgttacatgctaacagcattcactccttggcctctccc
agtatgtgtcctgtgcagtctgtacctacaacagtttttaaggagatactgcttggctgt
actgcggcaactccacctagtaaggacccaagacagcaaagtactccccaggctgccaac
tctccacctaaccttggagcaaaaattcctcaaggatgtcataaacaaagtttaccagag
gaaatttcttcctgtctaaatacaaagtctgaagctctgagaacaaaaccagatgtctgc
aaagcagggttgctctcaaagtcctctcagattggaactggagacttgaaaattctgact
gagccaaaaggcagctgtactcagcctaagacaaacactgatcaggaaaacagattggag
tctgttccacaagcattgactggccttcctaaggagtgcttacctacaaaggcttcttct
aaggcagaattggaaattgccaatcctcctgaactgcagaagcacctagaacatgcacct
tccccatcggatgtttcaaatgcaccagaagtgaaagcaggtgtcaatagtgatagccct
aataactgttcaggaaaaaaggtagaaccttcagctttagcttgccgatcacagaattta
aaggaatcttcagtaaaagtagataatgaaagctgttgttcaagaagcaacaataaaatc
cagaatggtgagtgtttctcaatatctttattggtagaagccccatccaggaagtcggtt
ttgacagacccagctaaactcaaaaagctgcaacagagtggcgaggccttcgtacaggat
gattcttgtgtgaacatcgtggcacagttgcctaaatgccgagagtgtcgcttggacagt
ctccgcaaggataaggagcaacagaaggactcacctgtgttttgccgcttctttcacttc
aggaggttacaattcaacaaacatggtgtgttgcgggtagaaggcttcttaacaccaaac
aagtatgacaatgaagcaattggcttgtggttacctttaaccaaaaacgttgtggggatt
gatttggacacagcaaagtacatcttggccaacattggagaccacttctgtcaaatggtg
atttctgaaaaggaagctatgtcaactattgagccacacaaagccctctccttccaaaga
ctaagtgatttactgatttttgcaggacaggttgcttggaagcgagctgtcaaaggtgtt
cgagaaatgtgtgatgtgtgcgacaccaccatcttcaacctgcactgggtgtgtcctcgg
tgtgggtttggagtatgtgtggactgctaccggatgaagagaaagaattgccaacaggca
ctctatgatgttggagacattgttcattctgtaagagcgaaatggggaataaaggcaaac
tgcccttgttcaaacaggcaattcaaactcttttcaaagccagcctcaaaggaagaccta
aaacagacttctttagctggagaaaaaccgactcttggtgcagtgctccagcagaatccc
tcagtgttggagccagcagctgtgggtggggaagcagcctccaagccagccggcagcatg
aagcctgcctgtccagccagcacatctcctctaaactggctggccgacctaaccagcggg
aatgtcaacaaggaaaacaaggaaaaacaaccaacaatgccaattttaaagaatgaaatc
aaatgccttccacccctcccacctttaagcaaatccagcacagtcctccatacgtttaac
agcacaattttgacacccgtaagcaacaacaattctggtttcctccggaatctcttgaat
tcttctacaggaaagacagaaaatggactcaagaatacaccaaaaatccttgatgacatc
tttgcctctttggtgcaaaataagacgacttctgatttatctaagaggcctcaaggacta
accatcaagcccagcattctgggctttgacactcctcactattggctttgtgataatcgc
ttgctgtgcttgcaagaccccaacaataagagcaactggaatgtgtttagggagtgctgg
aaacaagggcagatagggtctttgctaaaggaacactctgctcttggacaagaatttggg
agaattgccaaacagaaagatccagtgatggtgtctggagtgcatcataaattgaactct
gaactttggaaacctgaatccttcaggaaagagtttggtgagcaggaagtagacctagtt
aattgtaggaccaatgaaatcatcacaggagccacagtaggagacttctgggatggattt
gaagatgttccaaatcgtttgaaaaatgaaaaagaaccaatggtgttgaaacttaaggac
tggccaccaggagaagattttagagatatgatgccttccaggtttgatgatctgatggcc
aacattccactgcccgagtacacaaggcgagatggcaaactgaatttggcctctaggctg
ccaaactactttgttcggccagatctgggccccaagatgtataatgcttatgcacatcga
ttggttaaagaatttttttgcaataatttgatccagaatttttattctcagcagaagagt
caatcagggacctaccatcccccaggattaatcactcctgaagatcggaaatatggaaca
acaaatcttcacttagatgtatctgatgcagctaatgtcatggtctatgtgggaattccc
aaaggacagtgtgagcaagaagaagaagtccttaagaccatccaagatggagattctgac
gaactcacaataaagcgatttattgaaggaaaagagaagccaggagcactgtggcacata
tatgctgcaaaggacacggagaagataagggaatttcttaaaaaggttcataacttatat
agctgcatcaaagtggctgaagattttgtttctccagagcatgttaaacactgcttctgg
cttactcaggaattccgatatctgtcacagactcataccaatcacgaagataaattacag
gtgaagaatgttatctaccatgcagtgaaagatgcagttgctatgctgaaagccagtgaa
tccagttttggcaaaccttaa

>gi568815596f:86342048_86592116|GENSCAN_predicted_peptide_5|326_aa
MVFRVRPADPGQTTDERIHSDTGEERLCPAALRPGGEERLCPAALRPGGEERLCPAALRP
GGEERLCPAALRPGGEERLCPAALRPGGEERLCPAALRPGGEERLCPAALRPGGEERLCP
AALRPGGEERLCPAALRLGDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSK
LYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMK
AGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGA
MAASEDEEEEEEALEAMQSRLATLRS

>gi568815596f:86342048_86592116|GENSCAN_predicted_CDS_5|981_bp
atggtgttccgggtccgacccgcagatcctggccaaacgacggatgaaagaatacactca
gacacaggtgaggagcgcctctgcccggccgcccttcgtccgggaggtgaggagcgcctc
tgcccggccgcccttcgtccgggaggtgaggagcgcctctgcccggccgcccttcgtccg
ggaggtgaggagcgcctctgcccggccgcccttcgtccgggaggtgaggagcgcctctgc
ccggccgcccttcgtccgggaggtgaggagcgcctctgcccggccgcccttcgtccggga
ggtgaggagcgcctctgcccggccgcccttcgtccgggaggtgaggagcgcctctgcccg
gccgcccttcgtccgggaggtgaggagcgcctctgcccggccgcccttcgtctgggagat
atccaaagagaagaagaaaaagtgaaacgatctgtgaaagatgctgccaagaagggccag
aaggatgtctgcatagttctggccaaggagatgatcaggtcaaggaaggctgtgagcaag
ctgtatgcatccaaagcacacatgaactcagtgctcatggggatgaagaaccagctcgcg
gtcttgcgagtggctggttccctgcagaagagcacagaagtgatgaaggccatgcaaagt
cttgtgaagattccagagattcaggccaccatgagggagttgtccaaagaaatgatgaag
gctgggatcatagaggagatgttagaggacacttttgaaagcatggacgatcaggaagaa
atggaggaagaagcagaaatggaaattgacagaattctctttgaaattacagcaggggcc
ttgggcaaagcacccagtaaagtgactgatgcccttccagagccagaacctccaggagcg
atggctgcctcagaggatgaggaggaggaggaagaggctctggaggccatgcagtcccgg
ctggccacactccgcagctag