GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:22:05

Sequence gi568815588r:44275889_44485005 : 209117 bp : 45.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1044   1083   40                               0.34
 1.01 Init +  17184  17241   58  2  1   69   90    93 0.524   7.07
 1.02 Intr +  30902  30988   87  0  0   67   89    68 0.675   4.74
 1.03 Intr +  33267  33337   71  1  2  111   87   110 0.984  12.10
 1.04 Intr +  34907  35011  105  1  0  125  100    41 0.936   9.41
 1.05 Intr +  37407  37484   78  2  0   61   62    61 0.094   0.55
 1.06 Intr +  39949  40237  289  0  1   20  103   114 0.071   2.92
 1.07 Intr +  40920  41051  132  1  0   83   65    34 0.208   1.22
 1.08 Term +  56626  56750  125  2  2   75   41    86 0.044   1.15
 1.09 PlyA +  57193  57198    6                               1.05

 2.07 PlyA -  57673  57668    6                               1.05
 2.06 Term -  62713  62444  270  1  0   91   41   112 0.322   2.28
 2.05 Intr -  70250  70195   56  0  2   68   77    33 0.471  -1.10
 2.04 Intr -  71764  71660  105  2  0   88  100    32 0.439   4.59
 2.03 Intr -  72249  72211   39  1  0   93   94    15 0.417   0.80
 2.02 Intr -  72549  72524   26  2  2   39   94    26 0.354  -4.03
 2.01 Init -  73063  72975   89  1  2   97  110    59 0.967   9.12
 2.00 Prom -  73354  73315   40                              -5.36

 3.07 PlyA -  73714  73709    6                               1.05
 3.06 Term -  78409  78204  206  2  2   82   51    82 0.251   1.43
 3.05 Intr -  85939  85802  138  2  0  130   92   -17 0.320   3.34
 3.04 Intr -  97933  97779  155  0  2   68  102    61 0.513   5.22
 3.03 Intr - 102835 102749   87  0  0   90   82   132 0.901  11.89
 3.02 Intr - 104992 104875  118  2  1   93   75    88 0.999   7.52
 3.01 Init - 109117 109057   61  1  1   92  127   173 0.560  21.01
 3.00 Prom - 126049 126010   40                              -6.66

 4.05 PlyA - 126178 126173    6                               1.05
 4.04 Term - 131346 130557  790  2  1   67   44   208 0.041   7.09
 4.03 Intr - 134880 134802   79  1  1   90   71    80 0.022   5.11
 4.02 Intr - 139029 138678  352  0  1   16   25   231 0.002   4.50
 4.01 Init - 139265 139080  186  2  0   76   77   107 0.779   7.46
 4.00 Prom - 139884 139845   40                               0.24

 5.07 PlyA - 139900 139895    6                               1.05
 5.06 Term - 144831 144676  156  0  0   48   49   128 0.294   2.83
 5.05 Intr - 162824 162666  159  2  0   86   53    46 0.017   1.08
 5.04 Intr - 164461 164408   54  1  0   86   89    44 0.060   3.48
 5.03 Intr - 165981 165734  248  1  2   67   78    48 0.005  -1.12
 5.02 Intr - 174624 174527   98  2  2   36   40   130 0.057   2.65
 5.01 Init - 177461 177316  146  2  2   77   98    99 0.229   9.39
 5.00 Prom - 179802 179763   40                              -1.26

 6.00 Prom + 181606 181645   40                              -8.36
 6.01 Init + 182744 182779   36  1  0   63   90    42 0.512   1.92
 6.02 Intr + 188358 188413   56  2  2  137  103    -1 0.602   4.08
 6.03 Intr + 189086 189158   73  2  1   65   18    86 0.174  -1.29
 6.04 Intr + 192854 192969  116  1  2   27   99    92 0.210   3.45
 6.05 Intr + 197031 197141  111  0  0  115   99    29 0.629   6.19
 6.06 Intr + 200457 200562  106  0  1  105   70    41 0.805   4.22
 6.07 Term + 201610 201711  102  0  0   54   55   103 0.606   1.88
 6.08 PlyA + 202083 202088    6                               1.05

 7.00 Prom + 204319 204358   40                              -9.46
 7.01 Sngl + 205559 205855  297  1  0   41   54   282 0.711  15.85
 7.02 PlyA + 206344 206349    6                               1.05

 8.02 PlyA - 208174 208169    6                               1.05
 8.01 Term - 208959 208307  653  1  2   67   38   254 0.459  12.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 165550 165188  363  1  0   86   44   161 0.864   7.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_1|314_aa
MGKREGGAGRGASGGPRVGGCTGSVVLAPASDEGLRKLTIMAESEGGAGSSLHGSAIGKW
NGKAYAAVLLSQVEDERVCAGPAWERQAGQERPARKVQGKAPEAEGKMRKTQVWHAQATR
SNEHAVMQQPESQHGCLLDILVCTYLAEKGLSGSCGLTEALVAFGEGSSLGRKNCRDPWG
SLRQEPHWSDPRISSCLVAMLKQEGNFFLLGVKEWCDYQQDHYSYLHFSAPPTSPGPCVP
AQLTLLLVSTVPFRTSNLVFGPCFSEPWPLQGGVALGTGGWGEVTFRDATEGKAKGTIQA
ERGPGQSLAVTFSG

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_1|945_bp
atggggaagcgagaagggggggcggggaggggggcctcgggaggaccgcgggtgggaggc
tgtacaggaagtgtggtgctagcacctgcttctgatgagggcctcaggaagcttacaatc
atggcagaaagtgaaggtggagcaggctccagtttacatggctctgccattgggaagtgg
aatggcaaagcatatgcggccgtgctgctcagccaggtcgaggatgagcgggtgtgcgca
ggcccagcgtgggagaggcaggcaggccaggagcggcccgccagaaaggtgcaagggaaa
gccccagaggcggaggggaagatgagaaagacccaggtctggcatgctcaagccactcgt
tcaaatgaacatgctgttatgcagcagccagaaagccagcacggatgccttctggacatc
ctggtctgcacgtacctagccgagaaggggctctctggcagctgtgggctgacagaggca
ctggtggcctttggggagggcagcagtttaggaagaaagaactgcagagacccctggggc
tccctcaggcaggagcctcactggtcagaccctcggatctcttcatgtctagtggccatg
ctgaagcaggaaggcaacttcttcctcttaggagtgaaagagtggtgtgattaccagcaa
gatcattattcttatctccatttctcagcccctcccaccagccctggtccctgtgtgcca
gcacaactcactttgctgctggtgagcacggtccccttcaggacctctaacctggtcttt
ggaccctgcttctcggaaccatggcccttacaaggtggagtagccctaggcactggggga
tggggtgaagtgaccttccgggatgctaccgagggaaaagccaaagggactattcaggca
gagaggggaccagggcagtctttggcggtcacgttctcaggctga

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_2|194_aa
MKSTSKRCMQKGNSDYVGSCQDVMHVSNEGQQQVLPNREAFLQGMELSGSAESSFPLPAP
IQQVFDFQAGPRDELLGDTTLSPESQAEEKLQLLGQLLERGKGPVMLFQFSESQLSKRSI
CQTTNSVNTPNIQICQQLASFDSLEYVAVLTECDDGHGYLRSISFVLLWGSWRYQSIEDF
SDGGKFSNRGLSGG

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_2|585_bp
atgaagtctacatccaagcggtgcatgcagaaaggaaacagtgactacgtaggatcatgc
caggacgtgatgcatgtatcgaatgaagggcagcagcaagtattgccaaacagagaggcc
tttctccagggcatggagctctcagggagtgcagaatcttctttccctctccctgctccc
atccagcaggtctttgacttccaagctgggccaagggatgagctgctgggagatacgacc
ctcagtccagagagtcaagctgaggagaaactgcagctcctgggccagttattagaaaga
ggaaagggcccagtgatgctcttccaattcagtgaaagccaattaagtaagcgatcaatt
tgccaaacgactaattcagtgaacacaccaaatatacagatttgtcaacaacttgcttct
tttgactctctagagtatgtggcagttcttactgaatgtgatgatggtcacggatattta
aggagtatttcatttgtgctgctgtggggatcatggaggtaccagagcatagaggacttt
tctgatggaggaaaattcagcaacagaggcctgtctggaggctga

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_3|254_aa
MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNNSPTWGHLRWHGPWLRGPEGEGLLEATKVPLG
TAEARMQGSSILSLSPTPVPGKPGEAPGSCCTSSLDVSSLHPNLELLSGASESLAWPGAP
HTPCKPEPILPALCDMTLKPRVAKPFINVFITDEGNLQSCHMQPPQFPYAQRLDHLMPRK
DMSSDKVPRMLTAH

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_3|765_bp
atgaacgccaaggtcgtggtcgtgctggtcctcgtgctgaccgcgctctgcctcagcgac
gggaagcccgtcagcctgagctacagatgcccatgccgattcttcgaaagccatgttgcc
agagccaacgtcaagcatctcaaaattctcaacactccaaactgtgcccttcagattgta
gcccggctgaagaacaacaacagacaagtgtgcattgacccgaagctaaagtggattcag
gagtacctggagaaagctttaaacaacagtcccacctggggccacctacggtggcatggc
ccctggctgagaggccccgagggcgaagggttactggaagccacgaaagtgcctcttggg
acagccgaggccaggatgcagggcagcagcatcctgagcctcagccccacgccggtgccg
ggaaagcctggagaagccccaggttcttgctgtacttcctccctggatgtctcttctctt
cacccaaacttggagctgctttctggagcatctgaatccctggcctggcctggggctcct
catactccctgtaaaccagagcctattctgcctgccctctgcgatatgaccctgaagcct
agggtggcaaagccttttatcaatgtctttatcactgatgagggaaatcttcagtcttgc
cacatgcaacccccacagttcccatatgcccagaggctggatcacctgatgccaaggaag
gacatgtcctctgataaggtccccagaatgctgactgcccactga

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_4|468_aa
MKTIRSNQTVDIPENVITLKGCKVIVKGPRGTLWRDFNHISIELSLLVKKKKRLRLNNTC
GENMIKGVTLGFHYKMRSVYAHFPINIVTRENGSFVEIRNFLGEKYIRRVRMRPGVACSV
CQTQKHELILEGNDIELVSNSAALIQQATTVKNKHIRKFLDGIYVSEKETAQHIRKFLDG
SQLLASKGQNLMENEFDKLTEVGFRRVGKTTLNFIWNQKRALIAKTILGKKNKAGGIMLP
DFNLYYKATVTKTAWYWYQNRYIDQWNRMEASEITPHIYHHLTFDKPDAHKQWGKDSLFN
KWCWENWLAICRKLKLDPFFTPYTKINSRWIKDLDIRPKIIKILEENLGNTILDVGMGKG
FMSKTQKAMATKAKIDKWDLIQVKNICTAKETIIGVNRQPTEWQKIFAIYPSDKGLISRI
CKELKQIYKKKANNPNKKMSKGYEQTLLKRRHLCNQHTYEKMLNITDH

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_4|1407_bp
atgaagaccatccgcagcaatcagactgttgatattccggaaaatgtcattactctgaag
ggatgcaaagttattgtgaagggccccagaggaactctgtggagggacttcaatcacatc
agtatagaactcagtcttcttgtaaagaaaaaaaagaggctccggcttaacaacacttgt
ggtgagaacatgatcaagggtgttacactgggcttccattacaagatgagatctgtgtat
gctcacttccccatcaacatcgttacccgggagaatgggtcttttgttgaaatccgaaat
ttcttgggtgaaaaatacatccgcagggttaggatgagaccaggtgttgcttgttcagta
tgtcaaacccagaaacatgaattaatccttgaaggaaatgacattgagcttgtttcaaat
tcagcggctttgattcagcaagcaacaacagttaaaaacaagcatatcaggaaatttttg
gatggtatctatgtctctgaaaaagaaactgctcagcatatcaggaaatttttggatgga
tcacagctccttgccagcaagggacaaaacttgatggagaatgagtttgacaagttgaca
gaagtaggcttcagaagagttggaaaaactactttaaacttcatttggaatcaaaaaaga
gccctcatagccaagacaatcctgggcaagaagaacaaagctggaggcatcatgctacct
gacttcaatctatactacaaggctacagtaacaaaaacagcatggtactggtaccaaaac
agatacatagaccaatggaacagaatggaggcctcagaaataacaccacacatctaccac
catttgacctttgacaaacctgatgcacacaagcaatggggaaaagattccctatttaat
aaatggtgttgggaaaactggctagccatatgcagaaaactgaaactggaccccttcttt
acaccttatacaaaaattaactcaagatggatcaaagacttagacataagacctaaaatc
ataaaaatcctagaagaaaacctgggcaataccattctggatgtaggcatgggcaaaggc
ttcatgtctaaaacacaaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attcaagtaaagaacatctgcacagcaaaggaaactatcatcggagtgaataggcaacct
acagaatggcagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatc
tgcaaagaacttaaacaaatttacaagaaaaaagcaaacaaccccaacaaaaaaatgagc
aaaggatatgaacagacacttctcaaaagaagacatttatgtaaccaacatacatatgaa
aaaatgctcaacatcactgatcattag

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_5|286_aa
MGRNQHKKTENSKNQNASSSPKDHNSSPAREQNWMENEFDELTEVGFRRTNDKSHKIISV
DEVKAFEKIQQPFMLKTLKKLVLEVLAREVRQEKERKGIQLGNEEVKLSLFADDMIVYLE
HPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIAPSCELSFAENQFLSD
TVKRNCNLEGEKAKCIFVHSAEIARPSSRTLLGDTDEPCRALTSGPLNRRLIPGKGTVCN
TAANASFINFLRDNYFRQYSKMEYNHHLSSSSQNICWDKDISCKAT

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_5|861_bp
atggggagaaaccagcacaaaaagactgaaaattccaaaaaccagaacgcctcttcttct
ccaaaggatcacaactcctcaccagcaagagaacaaaactggatggagaatgagtttgac
gaattgacagaagtgggcttcagaagaaccaatgacaaaagccacaagattatctcagta
gatgaagtaaaggcctttgaaaaaattcaacagcccttcatgctaaaaacgctcaagaaa
ctagtgttggaagttctggccagagaagtcaggcaagagaaagaaagaaagggtattcaa
ttaggaaatgaggaggtcaaattgtccctgtttgcggatgacatgattgtatatctagaa
caccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctca
ggatacaaaatcaatgtacaaaaatcacaggcattcttatacaccaataacagacaaaca
gagagccaaatcgcaccatcatgtgagctctcctttgctgagaaccagttcttgtctgac
actgtgaaaagaaactgcaacttggaaggagaaaaggcaaaatgtatttttgtgcattca
gcagaaatagccaggccaagcagccggacacttttaggtgacacagatgaaccctgcagg
gcgctgacgtcaggccccctcaaccgaagactcattccagggaagggcactgtgtgcaac
acagcagccaatgcaagttttattaacttcctccgtgataactacttcagacaatattcc
aaaatggaatacaatcaccacctctccagtagttctcagaatatctgctgggataaagac
atctcctgcaaagctacatga

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_6|199_aa
MSGKGRVLVEDETLATTILLPASVNLIRYLISTVYLQNTAQLKVKKEETVKDDEQGVEVF
PAQPLTDGYAFGTLQIARLSGDPTRGSGITSWWSGCQPPGGGLQKNKPPKQVSILTVLLP
TLAHLCGEQARPSRIDSCGCSVCTVYPVFPNGSPNLTSAPVPGTPPVLHGSDPVDKFTSF
ACTVDGDCVQRELAGPFGF

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_6|600_bp
atgtcagggaaaggccgtgtcctggtggaggatgagaccctggcaaccaccattctcctt
cctgcatctgtgaatttgattaggtacctcatctcaactgtatatttgcagaacacagca
caattaaaagtcaagaaggaggagacagtaaaggacgatgagcaaggagtggaagtgttt
cctgcccaaccacttactgacgggtacgcctttggaactctgcagattgctcggctctct
ggggatcccacgagaggctctggaattacctcctggtggagtgggtgccagcccccggga
ggagggcttcagaaaaacaagcccccaaaacaagtctccattcttactgtccttctcccc
actctggcgcacctgtgtggagagcaggccaggccatcacgcattgactcatgtggttgt
tcagtctgcaccgtctacccagtatttcctaatggcagccccaatctgacatcggctcca
gtcccagggacacctccggtactacatgggagcgacccagtggacaaatttacatcattt
gcctgcactgtggatggtgactgtgtgcagagagaactggctggtccttttggattctga

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_7|98_aa
MGNDFDELTEVGFRRSVITNFSELKEDVRTHCKEAKNLEKRLGEWLTRINNVEKTLNDLT
ELKSMEQELRDARTGFNSQFDQVEERVSVTEDQINEIK

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_7|297_bp
atgggaaatgactttgatgagttgacagaagtaggcttcagaaggtcggtaataacaaac
ttctccgagctaaaggaggatgttagaacccattgcaaagaagctaaaaaccttgaaaaa
agattaggtgaatggctaactagaataaacaacgtagagaagaccttaaatgacctgacg
gagctaaaatccatggaacaagaacttcgtgatgcacgcacaggcttcaatagccaattc
gatcaagtggaagaaagggtatcagtgactgaagatcaaattaatgagataaagtga

>gi568815588r:44275889_44485005|GENSCAN_predicted_peptide_8|217_aa
XLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIISAQNLLKQISNFSTVSG
YKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLK
EIKEDTNKWKNIPCSWVGRINIVKMATLPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWN
QKRARIAKSILSQKNKAGGITLPDFKLYYKVTVTKTA

>gi568815588r:44275889_44485005|GENSCAN_predicted_CDS_8|654_bp
ntgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaatta
ggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaac
cccatcatctcagcccaaaatctccttaagcagataagcaacttcagcacagtctcagga
tacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaag
gaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatc
aatattgtgaaaatggccacactgcccaaggtaatttacagattcaatgccatccccatc
aagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaac
caaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatc
acactacctgacttcaaactatactacaaggttacagtaaccaaaacagcatag