GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:17:34

Sequence gi568815581f:37323509_37576979 : 253471 bp : 43.36% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   6917   6665  253  0  1  116  116   199 0.913  21.99
 1.02 Intr -  16342  16312   31  1  1  137   61    19 0.222   1.80
 1.01 Init -  35878  35678  201  1  0   45   59   167 0.159   6.54
 1.00 Prom -  41866  41827   40                              -2.26

 2.00 Prom +  42003  42042   40                              -7.76
 2.01 Init +  52585  52642   58  0  1   90   95    65 0.989   8.87
 2.02 Intr +  54371  54457   87  0  0  117   97    26 0.986   6.34
 2.03 Intr +  55629  55874  246  1  0  108  100    20 0.825   2.63
 2.04 Intr +  65162  65286  125  0  2  114   95    41 0.991   7.70
 2.05 Term +  68139  68216   78  2  0  111   48    75 0.992   3.56
 2.06 PlyA +  69817  69822    6                               1.05

 3.00 Prom +  71387  71426   40                              -5.06
 3.01 Init +  76199  76244   46  1  1   74   22    49 0.030  -2.26
 3.02 Intr + 100001 100107  107  0  2   95   93    73 0.706   8.43
 3.03 Intr + 103442 103501   60  1  0   95   50    68 0.774   2.63
 3.04 Intr + 114230 114321   92  1  2   87   91    74 0.897   6.39
 3.05 Intr + 116997 117154  158  0  2   72   93   179 0.999  16.45
 3.06 Intr + 119056 119144   89  2  2   62   75    69 0.843   2.69
 3.07 Intr + 121188 121260   73  2  1   62   47    92 0.420   1.48
 3.08 Intr + 141923 142033  111  0  0   80   53   149 0.479  10.95
 3.09 Intr + 146892 147024  133  1  1   98   84   130 0.960  13.30
 3.10 Intr + 147586 147629   44  1  2  115   91   -17 0.919  -0.82
 3.11 Intr + 149650 149675   26  2  2   77   77    17 0.624  -2.76
 3.12 Intr + 150224 150293   70  1  1  120   97     8 0.632   3.65
 3.13 Intr + 151048 151121   74  2  2  121   77    17 0.967   3.03
 3.14 Term + 153289 153474  186  0  0   88   48    90 0.975   2.49
 3.15 PlyA + 153895 153900    6                               1.05

 4.00 Prom + 154980 155019   40                              -6.06
 4.01 Init + 165379 165447   69  0  0   48  105    52 0.009   3.95
 4.02 Intr + 176493 176636  144  2  0   90   36    71 0.001   2.58
 4.03 Intr + 183279 183388  110  2  2   62   84     3 0.005  -3.62
 4.04 Intr + 188673 188777  105  0  0   89   27    74 0.500   0.73
 4.05 Term + 188878 189361  484  1  1   89   39   607 0.802  50.12
 4.06 PlyA + 189632 189637    6                               1.05

 5.13 PlyA - 190835 190830    6                               1.05
 5.12 Term - 195563 195432  132  2  0   89   47   138 0.998   7.89
 5.11 Intr - 197140 197030  111  1  0  100  114    24 0.989   6.78
 5.10 Intr - 212619 212471  149  1  2   99   72   150 0.790  14.45
 5.09 Intr - 214912 214816   97  1  1  100   77    34 0.982   3.08
 5.08 Intr - 217035 216872  164  1  2  110   78   155 0.686  16.39
 5.07 Intr - 219057 218464  594  1  0  102  113   321 0.961  28.54
 5.06 Intr - 230551 229607  945  2  0   86   94   732 0.904  64.72
 5.05 Intr - 237749 237687   63  0  0  114   97    18 0.939   3.99
 5.04 Intr - 238081 237963  119  0  2   90   83    72 0.990   7.01
 5.03 Intr - 245416 245283  134  1  2   57   75    90 0.991   4.04
 5.02 Intr - 247377 247129  249  0  0   82   99    51 0.460   3.23
 5.01 Intr - 248479 248283  197  2  2   81   97    85 0.657   7.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:37323509_37576979|GENSCAN_predicted_peptide_1|162_aa
MADPRSDHRHRLTSLRPAPPSHWLPLSPRARASPPGGPGSAAARSGVGGERPGVTPDVVT
SWSSPAEVFLEVDIYSDTVRAHFGGIMDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEIS
NLVKLDLLEEKEGSLSPASVGSDTLSDLGISSLQDGLALHIS

>gi568815581f:37323509_37576979|GENSCAN_predicted_CDS_1|486_bp
atggcagatccgcgctcggaccatcggcatcgcctcacatcgctccgccccgcgccgccc
tcccattggctgccgctgagccctcgggcccgcgcctcgccccccggcggccctggcagc
gccgcagcccggagcggggtcggaggtgaacggcctggagtaaccccggacgtagtcacc
tcatggagctcgccggctgaggtctttttggaagtggatatctactcagacactgtaaga
gctcattttggaggaataatggatgaaccatctcccttggcccaacctctggagctgaac
cagcactctcgattcataataggttctgtgtctgaagataactcagaggatgagatcagc
aacctggtgaagttggacctactggaggagaaggagggctccttgtcacctgcttctgtt
ggctcagatacactctctgatttggggatctctagcctacaggatggcttggccttgcac
ataagn

>gi568815581f:37323509_37576979|GENSCAN_predicted_peptide_2|197_aa
MDTILVFSLIIASYDANKKDLRDSSCRLEQLPGIFPKDVRSIRELQMQETHTETKRTTFI
QNRTIATLQCLGSDSKVKVNLVYLERRPKVKHILKNLRIIAAPRRNSSASSSCHLIPTSK
FQTGSLLKGKDTDENLEKRQKWSIVVKILIAVTLLLSGVAIIVFVIFEVPCPVGQDAANS
SNPKKAAEITVIHQTYF

>gi568815581f:37323509_37576979|GENSCAN_predicted_CDS_2|594_bp
atggataccatcttggtcttcagcctaatcattgcatcctatgatgccaacaagaaagac
ctcagagatagcagttgccgactggaacagctgcctgggatcttcccaaaagacgtgaga
agcatcagagaattgcaaatgcaagaaactcacacagaaaccaaaaggacaacattcatt
caaaaccggactatagctaccctgcagtgccttggctctgacagcaaagtaaaagtcaac
cttgtatatttggagagaaggccaaaggtcaagcatattttgaagaacctgagaatcatt
gctgctccccgcagaaacagctctgcctcctcaagctgtcacctaatccccacatccaag
tttcagactggatctcttctaaaaggcaaagacacagatgagaacctagagaagagacag
aaatggagtattgtggtcaaaattctgattgctgtcaccctgttgctcagtggagttgcc
attatagtatttgtaatttttgaagtcccatgtcctgttggacaagatgctgccaattca
tcaaacccaaagaaagctgcagagatcactgttatccaccagacatacttctga

>gi568815581f:37323509_37576979|GENSCAN_predicted_peptide_3|422_aa
MGNEGLDSRKLFNGHDDPSDKPPCRGCSSYLMEPYIKCAECGPPPFFLCLQCFTRGFEYK
KHQSDHTYEIMTSDFPVLDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKH
YMKHFINNPLFASTLLNLKQAEEAKTADTAIPFHSTDDPPRPTFDSLLSRDMAGYMPARA
DFIEEFDNYAEWDLRDIDFVEDDSDILHVMERRYPKEVQDLYETMRRFARIVGPVEHDKF
IESHACARTYDHLKKTREEERLKRTMLSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPM
ASNSETRSYYITQVCELTSAPALPYNGSLFLFVDLAGRRSAPPLNLTGLPGTEKLNEKEK
ELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYIT
KG

>gi568815581f:37323509_37576979|GENSCAN_predicted_CDS_3|1269_bp
atgggtaacgaaggcctggattcacgaaaactgtttaatggccatgatgatccctctgat
aagccaccttgccgaggctgctcctcctacctcatggagccttatatcaagtgtgctgaa
tgtgggccacctccttttttcctctgcttgcagtgtttcactcgaggctttgagtacaag
aaacatcaaagcgatcatacttatgaaataatgacttcagattttcctgtccttgatccc
agctggactgctcaagaagaaatggcccttttagaagctgtgatggactgtggctttgga
aattggcaggatgtagccaatcaaatgtgcaccaagaccaaggaggagtgtgagaagcac
tatatgaagcatttcatcaataaccctctgtttgcatctaccctgctgaacctgaaacaa
gcagaggaagcaaaaactgctgacacagccattccatttcactctacagatgaccctccc
cgacctacctttgactccttgctttctcgggacatggccgggtacatgccagctcgagca
gatttcattgaggaatttgacaattatgcagaatgggacttgagagacattgattttgtt
gaagatgactcggacattttacatgtaatggaacggcggtatcccaaggaggtccaggac
ctgtatgaaacaatgaggcgatttgcaagaattgtggggccagtggaacatgacaaattc
attgaaagccatgcatgtgccagaacctacgatcacctcaagaagacacgggaggaagag
cgccttaaacgcactatgctctcagaagttctccagtatatccaggacagtagtgcttgc
cagcagtggctccgccggcaagctgacattgattccggcctgagtccttccattccaatg
gcttcgaattcagaaacaaggtcttactatatcacccaggtgtgtgagttgacctcagcc
cctgctttgccatataatggctcattgttcctgtttgtggatcttgcaggtagacggagt
gcaccacccttgaacctcactggcctccctggcacagagaagctgaatgaaaaagaaaag
gagctctgtcagatggtgaggttggtccctggagcctatttagaatacaaatctgctcta
ttgaacgaatgtaacaagcaaggaggcttaagactggcgcaggcaagagcactcatcaag
atagatgtgaacaaaacccggaaaatctatgatttcctcatcagagaaggatacatcact
aaaggctaa

>gi568815581f:37323509_37576979|GENSCAN_predicted_peptide_4|303_aa
MPTRFDCSAILRPTICNGEEQGLDGTDTQLPSQCSRTALSMGAGMAFASCLHPAEAEDSA
VYLTLLGNSSVPGGCFVHQMVYQDVAVVPCSGTRGNWSSSAHLGLAFLKETLILDSLVEE
NKTLWSCRQRCKCDCWRLHELQRGSVASNRHLLQARGITCIVNATIEIPNFNWPQFEYVK
VPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLL
EAYNWVKARRPVIRPNVGFWRQLIDYERQLFGKSTVKMVQTPYGIVPDVYEKESRHLMPY
WGI

>gi568815581f:37323509_37576979|GENSCAN_predicted_CDS_4|912_bp
atgcctactcgttttgactgctcagcaattctgaggccaaccatttgcaacggcgaggag
caggggctggatggcacagacacccagttgccctcacagtgcagtcggactgctctcagc
atgggagcgggcatggccttcgccagttgcctccatcccgctgaagcagaagactcagct
gtttacctcaccctgctcggaaactctagcgtgccagggggatgttttgtgcaccaaatg
gtgtaccaggatgtggcagtagttccctgttctggcactaggggaaactggagcagctcg
gcccatctgggcttagcctttctgaaggagactctaattttggattccttggtggaggaa
aataaaacactctggtcttgccgccaacgatgcaagtgtgactgctggcgtcttcatgag
ctccagagaggcagtgtggcctccaatcggcacctcctccaggctcgtggcatcacctgc
attgttaatgctaccattgagatccctaatttcaactggccccaatttgagtatgttaaa
gtgcctctggctgacatgccgcatgcccccattggactgtactttgacaccgtggctgac
aagatccacagtgtgagcaggaagcacggggccaccttggtgcactgtgctgcaggggtg
agccgctcagccacgctgtgtatcgcgtacctgatgaaattccacaacgtgtgcctgctg
gaggcgtacaactgggtgaaagcccggcgacctgtcatcaggcccaacgtaggcttctgg
aggcaactgatagactacgagcgccagctctttgggaagtcgacagttaaaatggtacag
acaccttatggcatagttcccgacgtctatgagaaggagtcccgacacctgatgccttac
tgggggatttag

>gi568815581f:37323509_37576979|GENSCAN_predicted_peptide_5|984_aa
XAYKKILETTMTPTGIDTAKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLA
MIAVTQRGVPAMSPDALNQFPAAPIPTLSGFSMTLPTPVSQPTVIPSGPAGSMPLSLGQP
VMGINLVGPVGGAAAQASSGFIPTYPANQVVKPEEDDFQDFQDASKSGSLDDSFSDFQEL
PASSKTSNSQHGNSAPSLLMPLPGTKALPSMDKYAVFKGIAADKSSENTVPPGDPGDKYS
AFRELEQTAENKPLGESFAEFRSAGTDDGFTDFKTADSVSPLEPPTKDKTFPPSFPSGTI
QQKQQTQVKNPLNLADLDMFSSVNCSSEKPLSFSAVFSTSKSVSTPQSTGSAATMTALAA
TKTSSLADDFGEFSLFGEYSGLAPVGEQDDFADFMAFSNSSISSEQKPDDKYDALKEEAS
PVPLTSNVGSTVKGGQNSTAASTKYDVFRQLSLEGSGLGVEDLKDNTPSGKSDDDFADFH
SSKFSSINSDKSLGEKAVAFRHTKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQFDMKL
ADVGGDLKHVMSDSSLDLPTVSGQHPPAADIEDLKYAAFGSYSSNFAVSTLTSYDWSDRD
DATQGRKLSPFVLSAGSGSPSATSILQKKETSFGSSENITMTSLSKVTTFVSEDALPETT
FPALASFKDTIPQTSEQKEYENRDYKDFTKQDLPTAERSQEATCPSPASSGASQETPNEC
SDDFGEFQSEKPKISKFDFLVATSQSKMKSSEEMIKSELATFDLSVQGSHKRSLSLGDKE
ISRSSPSPALEQPFRDRSNTLNEKPALPVIRDKYKDLTGEVEVIKKANDTLNGISSSSVC
TEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATAVCSEKLQQLLKDIDKVWNNLIGFMSL
ATLTPDENSLDFSSCMLRPGIKNAQELACGVCLLNVDSRSRAFNSETDSFKLAYGGHQYH
ASCANFWINCVEPKPPGLVLPDLL

>gi568815581f:37323509_37576979|GENSCAN_predicted_CDS_5|2955_bp
natgcctataagaaaatcttagaaaccacaatgactccaactggaatagatactgccaaa
ctgtatcccattctgatgtcatctgggcttcccagggaaactcttggacagatatgggcc
ttagctaatcgaactacacctggcaaacttacaaaagaagaactttataccgttctagcc
atgatagcggtaacacagaggggcgttcctgcaatgagtcctgatgctttaaaccagttc
ccagcagctcctattccaactttaagtggcttttctatgactctgcctacaccggtgagt
cagccaactgtgataccttcaggtcctgcgggctccatgcccctcagccttggacagcca
gtcatgggcattaaccttgttggaccagtgggtggagctgcagcccaggcttctagtggt
ttcataccaacctaccctgcaaatcaggtagtaaagccagaagaagatgacttccaggat
tttcaagatgcttctaagtcaggatcccttgatgactcattcagtgatttccaagagttg
cctgcttcttcaaaaacaagtaactcccagcatggaaacagtgccccttctttgttgatg
ccacttcctggaactaaagcattgccttcaatggacaaatatgctgtgtttaaaggaatt
gcagctgacaagtcctctgaaaatactgttccacctggagatcctggtgataaatatagt
gctttcagagaacttgaacagacagcagagaataaacctttaggagaaagctttgcagaa
ttcagatctgcaggaactgatgatggtttcaccgattttaaaacagccgatagtgtatca
ccactagagccaccaacaaaagacaaaacttttccaccatccttcccctcaggaactata
caacagaaacaacaaacacaagtgaaaaaccctctgaacttagcagacctagatatgttt
tcctcagttaattgcagcagcgagaaaccattgtctttttcagctgtgtttagcacatca
aaatcagtttctacaccacagtcaacaggttctgctgctactatgacagcattggcagca
acaaaaacttctagtttggctgatgattttggagaattcagcctttttggggaatattct
ggtctagcacctgttggggagcaggatgactttgcagattttatggctttcagtaatagc
tctatttcatctgagcaaaagccggatgacaaatatgatgcccttaaagaggaagccagt
cctgttcctctaaccagcaacgtgggcagcacagtgaagggtggacaaaactcgactgct
gcgtctaccaagtacgatgtcttcagacaactttctctggaagggtctggactaggtgtt
gaagacctgaaagataacactccttcaggaaaaagtgatgatgattttgctgacttccac
tccagtaaattttcttccataaactcggacaaatccctgggagagaaagcagtggctttc
agacacaccaaagaagactctgcatcagtgaagtccttagatctcccttccattggtggc
agcagtgttggcaaggaggactctgaagatgcactctctgttcagtttgacatgaaattg
gctgatgtgggaggagatcttaagcatgtcatgtctgatagctctttggatttaccaaca
gttagtggccagcatcctcctgctgcagatatagaggacttaaaatatgctgcttttgga
agctacagtagcaattttgcagtgagcacacttacaagctatgactggtcagacagggat
gatgcaactcagggcagaaaactctctccatttgtcctctcagcaggaagtggatccccc
tcagccacctcaattcttcaaaagaaagagacttcatttggcagttctgaaaacatcacc
atgacatctctctccaaagtaacgacctttgtaagtgaagatgctcttccagagaccacc
ttcccagctcttgccagttttaaagacacgattcctcagaccagtgagcaaaaggaatat
gaaaacagagactataaagatttcacaaaacaggacctgcctacggctgaacggagccag
gaggccacgtgtcccagcccagcgtccagtggtgcctctcaagaaaccccgaacgaatgt
tcggatgactttggagagtttcaaagtgaaaagcccaaaatcagcaaatttgacttctta
gtagccacttcacaaagcaaaatgaaatccagtgaagaaatgatcaaaagtgagctggca
acctttgacctttctgttcaaggatcacacaagaggagtttgagccttggtgataaagaa
ataagccgttcttctccttctccagctttggagcagcctttcagagaccgttccaatact
ctgaatgagaagcccgccctgcccgtcatccgagacaagtacaaagacctgacgggagag
gtggaggtcattaagaaggcaaatgataccttaaatggaatcagtagtagttctgtttgc
acagaagtaattcagtcagctcaaggcatggaatatttattaggtgttgttgaagtgtac
agggtaaccaagcgtgtggagctggggataaaagccactgcagtgtgcagtgagaaactc
cagcagttgctgaaggacatcgataaagtatggaataacctaatcggcttcatgtcactc
gccacactcacaccagatgaaaactcgctggatttttcctcctgtatgttacggcctggg
attaaaaatgctcaggagcttgcctgtggagtgtgcctcttgaatgtggactcgaggagc
cgggcattcaactcagaaacagacagtttcaagctggcctatggagggcaccagtatcac
gccagctgtgccaacttctggatcaactgtgtcgaaccaaagcctcctggcctcgtcctg
cctgacctgctctga