GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:04:56

Sequence gi568815596r:127842009_128127163 : 285155 bp : 44.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1565   1560    6                               1.05
 1.03 Term -   6177   6099   79  2  1   80   33   146 0.628   5.54
 1.02 Intr -  11097  10917  181  1  1   29   95   225 0.789  16.23
 1.01 Init -  16092  16020   73  0  1  107   53    35 0.758   3.18
 1.00 Prom -  20818  20779   40                              -6.86

 2.08 PlyA -  21229  21224    6                               1.05
 2.07 Term -  23197  23086  112  0  1  117   47    81 0.973   4.93
 2.06 Intr -  24988  24892   97  2  1  131  115    69 0.999  12.97
 2.05 Intr -  25271  25137  135  0  0   66   98    26 0.739   1.94
 2.04 Intr -  27536  27446   91  2  1   86  113    99 0.946  11.77
 2.03 Intr -  28920  28806  115  2  1  103   78    97 0.999  10.65
 2.02 Intr -  29351  29241  111  1  0   51   95    97 0.986   6.19
 2.01 Init -  32226  31820  407  0  2   61   75   371 0.999  29.16
 2.00 Prom -  57065  57026   40                              -1.86

 3.03 PlyA -  57562  57557    6                               1.05
 3.02 Term -  64204  64136   69  1  0   95   42    38 0.269  -2.16
 3.01 Init -  74033  73830  204  2  0   41   12   202 0.511   6.75
 3.00 Prom -  91376  91337   40                              -3.56

 4.20 PlyA -  92158  92153    6                               1.05
 4.19 Term - 100156  99998  159  1  0  118   41   118 0.993   8.04
 4.18 Intr - 100529 100416  114  2  0  112   36    38 0.756   1.64
 4.17 Intr - 103551 103448  104  1  2   56   82    62 0.993   2.29
 4.16 Intr - 107986 107861  126  2  0   89   96    50 0.987   6.55
 4.15 Intr - 108400 108152  249  2  0   55   23   244 0.746  12.01
 4.14 Intr - 113336 112978  359  1  2   89  119   248 0.844  22.90
 4.13 Intr - 136081 135977  105  0  0  104   84    64 0.521   6.93
 4.12 Intr - 144954 144777  178  1  1   90   92   130 0.745  12.58
 4.11 Intr - 147858 147706  153  1  0   51   30   118 0.360   2.34
 4.10 Intr - 151300 151179  122  0  2   98   80    51 0.996   5.44
 4.09 Intr - 154483 154342  142  2  1   34   91   129 0.985   7.21
 4.08 Intr - 157837 157733  105  2  0   88  123    18 0.970   5.49
 4.07 Intr - 158138 158048   91  2  1   96  119    64 0.993   9.87
 4.06 Intr - 158446 158299  148  0  1   78   98    -8 0.239  -0.56
 4.05 Intr - 171146 171005  142  0  1  103    9    70 0.124   0.01
 4.04 Intr - 172906 172795  112  1  1  131   82    44 0.903   8.05
 4.03 Intr - 175907 175807  101  0  2   68   79    77 0.534   4.63
 4.02 Intr - 184290 184173  118  0  1   87   94    13 0.900   1.84
 4.01 Init - 185155 185084   72  1  0  100  103    71 0.861   8.92
 4.00 Prom - 187989 187950   40                              -4.56

 5.00 Prom + 197376 197415   40                              -5.26
 5.01 Init + 197854 197907   54  0  0   80  100    23 0.635   3.98
 5.02 Intr + 202420 202602  183  0  0    0   62   219 0.360  10.48
 5.03 Intr + 220611 220703   93  2  0   93   95    45 0.192   5.86
 5.04 Term + 221577 221831  255  2  0   54   52    71 0.104  -4.31
 5.05 PlyA + 224483 224488    6                               1.05

 6.00 Prom + 232134 232173   40                              -5.66
 6.01 Init + 249350 249407   58  1  1   81   80   134 0.728  11.37
 6.02 Intr + 255421 255556  136  2  1  112  110   -16 0.079   2.63
 6.03 Intr + 271076 271250  175  2  1   75   78    41 0.224   1.74
 6.04 Intr + 273116 273212   97  1  1   78   63   106 0.874   6.68
 6.05 Intr + 274257 274335   79  1  1  109   95    51 0.990   6.51
 6.06 Intr + 278348 278448  101  2  2   60   90    72 0.934   4.35
 6.07 Intr + 279191 279290  100  0  1   62   95    42 0.392   1.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:127842009_128127163|GENSCAN_predicted_peptide_1|110_aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLEGRFEDEELQQILDDIQTKRSFQY

>gi568815596r:127842009_128127163|GENSCAN_predicted_CDS_1|333_bp
atggcggcgggtggcagcgatccgcgggctggcgacgtagaggaggacgcctcacagctc
atctttcctaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggaacatcgaaagcagcagaatgagagtgcagaggacgaacaggagctctcagaagtc
ttcatgaaaacattaaactacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgttcgtagcttggagggacggtttgaagatgaggagctgcagcagattcttgat
gatatccagacaaagcgcagctttcagtattaa

>gi568815596r:127842009_128127163|GENSCAN_predicted_peptide_2|355_aa
MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG
RENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHL
YGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRF
PPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKE
QDNYTGVTSDRKDAGAGSLGTAIMACVGLSSHVSESPRDWQTDWAPDWDQIQTIDSLLRK
GGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS

>gi568815596r:127842009_128127163|GENSCAN_predicted_CDS_2|1068_bp
atgggaaaaagacgttgtgttcctccactcgagcccaagttggcagcaggctgttgtggg
gtcaagaagcccaaattatctggaagtggaacgcacagtcacgggaatcagtccacaact
gtccccggctctagttcaggacctcttcaaaaccaccagcatgtggacagcagcagtgga
cgggagaatgtgtcagacttaactctgggacctggaaactctcccatcacacgaatgaat
cccgcatcgggagcgctgagccctcttccccggcctaatggaactgccaacaccactaag
aatctggtggtgactgcagagatgtgctgctactgcttcgacgtactctactgtcacctc
tatggcttcccacagccacgacttcctagattcaccaatgacccctatccgctctttgtg
acgtggaagacagggcgggacaagcggcttcgtggctgcattgggaccttctcagccatg
aatcttcattcaggactcagggaatacacgttaaccagtgcacttaaggacagccgattt
ccccccctgacccgagaggagctgcctaaacttttctgctctgtctccctccttactaac
tttgaggatgccagtgattacctggactgggaggtaggggtccatgggattcgaattgaa
ttcattaatgaaaaaggtgtcaaacgcacagccacatatttacctgaggttgctaaggaa
caagataattatactggggtaacatctgacaggaaggacgcaggagcagggagcctgggg
acagccattatggcatgtgtcgggctatcatctcatgtctcagagtctccacgggactgg
cagacagactgggcgccagactgggatcagatccagacaatagactccttgctcaggaaa
ggtggctttaaagctccaattaccagtgaattcagaaaaacgatcaaactcaccaggtac
cgaagtgagaaggtgacaatcagttacgcagagtatattgcttcccgacagcactgtttc
cagaacggcactcttcatgccccgcccctctacaatcattactcctga

>gi568815596r:127842009_128127163|GENSCAN_predicted_peptide_3|90_aa
MGEGQNSNTDRILEVVDFGSSRTLMGDFERFKTSVEKVIADVVEIARELELEVEPENVTE
LLQSHYKTDQPHPESSAFSIHSGRFKGAHE

>gi568815596r:127842009_128127163|GENSCAN_predicted_CDS_3|273_bp
atgggagaaggtcaaaatagcaacactgacaggattttggaagtagttgattttggaagt
agtagaaccctcatgggtgacttcgagaggttcaagacttcagtggagaaagtaattgct
gatgtggtggaaatagcaagagaactagaattagaagtggagccggaaaatgtgactgaa
ttgctgcagtctcattataaaactgaccagccccatcctgaatcatctgccttcagcata
cactcaggtcgtttcaaaggggcccacgaataa

>gi568815596r:127842009_128127163|GENSCAN_predicted_peptide_4|899_aa
MGPPRHPQAGEIEAGGAGGGRRLQVEMSSQQFPRLGAPSTGLSQAPSQIANSGSAGLINP
AATVNDESGRDSEVSAREHMSSSSSLQSREEKQEPVVGHPSNLHHIMTTNVQMSIIRSNA
PGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQLPNAATAQPAVQHIIHQPIQARRS
LGRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTGTP
VAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTVPSHSSHATAVTTSNIPVAKVV
PQQITHTSPRIQPDYPAERSSLIPISGHRASPNPVAMETRSDNRPSVPVQFQYFLPTYPP
SAYPLAAHTYTPITSSVSTIRQYPVSAQAPNSAITAQTGVGVASTVHLNPMQLMTVDASH
ARHIQGIQPAPISTQAVVLADGATIVANPISNPFSAAPAATTVVQTHSQSASTNAPAQGS
SPRPSILRKKPATDGMAVRKTLIPPQPPDVASPRVESSMRSTSGSPRPAGAKPKSEIHVS
MATPVTVSMETVSNQNNDQPTIAVPPTAQQPPPTIPTMIAAASPPSQPAVALSTIPGAVP
ITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVSAVPPLATNTVS
PSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDDEKSTAKSLLVK
AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKAM
LQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIPKKKAATDDDLH
RINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKKVSKLKRKEKV

>gi568815596r:127842009_128127163|GENSCAN_predicted_CDS_4|2700_bp
atgggccctccgcggcacccccaggccggcgagatagaagcgggcggtgcgggcggcggg
cggcggctacaggtggaaatgagttctcaacagtttcctcggttaggagccccttctacc
gggctgagccaggccccttctcagattgcaaacagtggttctgctggattgataaaccca
gctgctacagtcaatgatgaatctggtcgagattctgaagtcagtgccagggagcacatg
agttccagcagctccctccagtcccgggaggagaagcaagagcctgttgtgggccatccc
agtaacctgcatcacatcatgactacaaatgtgcaaatgtctatcatccgcagcaatgct
cctgggccccctcttcacattggagcttctcatttacctcgaggtgcagctgctgctgct
gtgatgtccagttctaaagtaaccacagtcctgaggccgacctcacagctgccaaatgct
gctactgctcagccagcagtacagcacatcattcaccaaccaatccaggcacgtcggagc
ctgggtaggccaaccttgtctatccagcatcctccatctgcagcaatcagtattcagcgt
cctgcccagtcacgagatgtcacaacaagaatcacactaccatctcaccctgcattaggg
acgccaaaacagcagcttcatacaatggctcagaaaacaatcttcagtactggcacgcca
gtggctgcagccacagtagcacctattttggcaaccaacaccattccttcagcgaccaca
gctggatctgtgtcacacacgcaagctcccacaagtaccattgttaccatgacagtaccc
tcccattcctcccatgctactgctgtgaccacctcaaacatcccagtcgccaaggtggtg
ccccagcagatcacgcacacttctcctcggatccagccagactaccctgccgagaggagt
agcctgattcccatctccggacatcgggcctctcccaatcctgtggccatggaaacccga
agtgacaacagaccgtctgttcccgttcagttccaatattttttgccaacttacccccct
tctgcatacccactggcggcacatacctacaccccaatcaccagttccgtgtccactatc
cgacagtatccagtttcagctcaggctccaaactctgccatcacagctcagactggtgtt
ggggtagcgtctaccgtccacctaaaccccatgcagttgatgacagtggatgcatcgcat
gctcgacatattcaagggatccagccagcacccatcagtacccaggcagtggtgttggca
gatggagccacaattgtggccaaccctattagcaatccattcagtgctgctccagcagca
acaaccgtggtgcagacccacagccagagtgctagcaccaacgctcccgcccagggctca
tcgccacggccaagcatactccggaagaaacctgccacagatggaatggcagttcggaaa
accctcattcctcctcagcctcctgatgttgctagtcctcgagtggaaagctctatgcgg
agtacgtctgggtcacctaggcctgcaggtgccaaacccaagtctgaaatccacgtgtct
atggccactccggtcactgtgtccatggagactgtatccaatcaaaataatgatcagcct
accattgccgtccctccaactgcccagcagcccccaccgaccattccaactatgattgca
gcagccagtcccccgtcacaaccagccgttgccctttcaaccattcctggagcggtcccc
atcactccacccatcaccaccattgcagctgcaccacctccatcagtcactgtgggtggc
agtctttcctccgtcttgggccctcccgttcctgaaattaaagtgaaagaagaagtagaa
ccaatggatatcatgaggccagtttctgcagttcctccactggctaccaacactgtgtct
ccatctcttgcattgctggcaaacaacttgtccatgcctacaagtgacctaccacctggt
gcctccccaaggaaaaagcctcgaaagcaacagcatgtgatctcaacagaagaaggtgac
atgatggagacaaacagcactgatgatgagaagtccactgccaagagtcttctggtgaag
gctgagaagcgcaagtctcctcccaaggagtatattgatgaggaaggtgtgagatatgtc
ccagtgcgtccaagaccccccattactttgcttcgtcactatcggaacccctggaaagct
gcttaccaccactttcagaggtacagtgacgtccgggtcaaagaggagaagaaagctatg
ctgcaggaaatagctaatcagaaaggagtatcctgtcgtgctcaaggctggaaagtccac
ctctgtgctgcccagttactacagctgacgaatctagaacatgatgtctatgaaagactt
actaacctgcaggaagggattatcccaaagaaaaaagcagcaacagatgatgatctccac
cgaataaacgaactgatacagggaaatatgcagaggtgtaaacttgtgatggatcaaatc
agtgaagccagagactccatgcttaaggttttagatcataaagaccgtgtcctgaagctg
cttaacaagaacgggactgtcaaaaaagtgtccaaattgaagcgaaaggaaaaagtctag

>gi568815596r:127842009_128127163|GENSCAN_predicted_peptide_5|194_aa
MGGDITPRNENMDLKKEPKFCKGDENVEDEEHSGRSSEVDNDQLRPLIEADSLITTRKVA
EELNIEHSMVVRHLKQIGKCSSRVVVLLWHLAQAMIHSAMTSGLPCTSQKWHTLASRGIS
KNEEEKEAPHGHRMGVQELKSSAVLEKGAHVLTVSPNALMSFRILWASTSYLIYPAWSVF
SLWLLATFIYDCLG

>gi568815596r:127842009_128127163|GENSCAN_predicted_CDS_5|585_bp
atggggggagacataacacccaggaatgaaaatatggatttaaagaaggaaccaaagttt
tgcaaaggagatgagaacgttgaagatgaggagcatagtggccggtcatcggaagttgac
aatgaccagttaagaccactcattgaagctgattctctcataactactcgaaaagttgct
gaagaactcaacatcgaacattctatggttgttaggcatttgaagcaaattggaaagtgc
agctcaagggtagtggtcctgctctggcacctggcccaggcgatgatccacagtgccatg
acctcaggactgccatgcaccagccagaagtggcacactctggcctctagagggatctcc
aagaacgaggaagagaaggaggctccacacggtcacagaatgggggtccaggagcttaaa
tcatcagctgtcctggaaaagggggctcatgtcttgaccgtatctccaaatgcactgatg
tcctttcgtatcctttgggcaagcacgtcctacttgatttaccctgcctggtctgttttt
tctctctggttactggcaacattcatctatgactgcttaggctga

>gi568815596r:127842009_128127163|GENSCAN_predicted_peptide_6|249_aa
MGCKGDASGACAAGALPVTGVCYKMGVLVVLTVLWLFSSVKADSKAITTSLTTKWFSTPL
LLEARPKPLLFKGDHRYPSSNPESPVVIFYSEIGSEEFSNFHRQLISKSNAGKINYVFRH
YIFNPRKEPVYLSGYGVELAIKSTEYKAKDDTQVKGTEVNTTVIGENDPIDEVQGFLFGK
LRDLHPDLEGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILASPVELALVVMKDL
SQNFPTKAS

>gi568815596r:127842009_128127163|GENSCAN_predicted_CDS_6|747_bp
atgggctgcaagggagacgcgagcggtgcgtgtgccgcgggtgcgctgccggtgacagga
gtttgctataaaatgggagttctggttgtactcactgttctgtggctgttctcctcagta
aaggccgactcaaaagccattacaacctctcttacaacaaaatggttttccactccattg
ttgttagaagccagacccaaacctttattgttcaaaggagatcacagatatccctcgtct
aatcctgaaagccctgtggtgattttctactctgagattggctctgaggaattttccaat
tttcaccgccagcttatatcaaaaagcaatgcaggcaaaatcaattatgtattcagacat
tatatatttaatcccaggaaggagcctgtttacctctctggctatggcgtggaattggcc
attaagagcactgagtacaaggccaaggatgatactcaggtgaaaggaactgaggtaaac
accacagtgattggtgaaaatgatcctattgatgaggttcaggggttcctctttggaaaa
ttaagagatctgcaccccgacctggagggacagttgaaagaactcagaaagcatcttgta
gagagcaccaatgaaatggcacctttaaaggtttggcagttgcaagatctcagtttccag
actgctgctcgaatcttggcttctcctgttgagttggctttggttgtcatgaaggatctt
agtcagaattttcctaccaaagccagn