GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:02:06

Sequence gi568815590r:100604301_100821583 : 217283 bp : 43.67% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1106   1222  117  1  0   65   48   166 0.184   8.84
 1.02 PlyA +   1682   1687    6                               1.05

 2.14 PlyA -   2312   2307    6                               1.05
 2.13 Term -   2778   2755   24  0  0  104   42     1 0.042  -4.68
 2.12 Intr -   4263   4194   70  2  1   79   94    51 0.067   3.98
 2.11 Intr -   7787   7700   88  0  1   81  103    32 0.244   3.03
 2.10 Intr -   8785   8695   91  1  1   76   99    97 0.984   9.17
 2.09 Intr -  10955  10848  108  2  0   13  111    59 0.647   1.18
 2.08 Intr -  13430  13320  111  2  0   90   99   112 0.968  13.08
 2.07 Intr -  26091  25958  134  1  2   81   86    53 0.139   4.76
 2.06 Intr -  31711  31597  115  1  1  102   80    53 0.309   5.92
 2.05 Intr -  40280  40034  247  1  1   88   75    66 0.155   2.76
 2.04 Intr -  41831  41663  169  0  1   75   82    25 0.157  -0.40
 2.03 Intr -  44801  44738   64  2  1   21   60    92 0.179  -2.01
 2.02 Intr -  45048  44974   75  0  0   82   99    99 0.610  10.11
 2.01 Init -  45214  45149   66  1  0   87   50   112 0.352   8.38
 2.00 Prom -  51215  51176   40                              -4.76

 3.20 PlyA -  54064  54059    6                               1.05
 3.19 Term - 100090  99998   93  1  0  137   39   104 0.997   8.23
 3.18 Intr - 100756 100626  131  2  2   81   55    77 0.935   4.11
 3.17 Intr - 101373 101289   85  0  1   76   92    10 0.770  -0.41
 3.16 Intr - 102505 102351  155  2  2   45   80    78 0.676   2.49
 3.15 Intr - 104923 104833   91  1  1  148   97    33 0.997   9.77
 3.14 Intr - 105431 105159  273  2  0  111   96   161 0.999  16.93
 3.13 Intr - 108157 108062   96  1  0  100  116   124 0.999  16.61
 3.12 Intr - 108489 108352  138  0  0   11   27   208 0.991   7.66
 3.11 Intr - 108881 108787   95  0  2   26  106   103 0.252   5.58
 3.10 Intr - 111301 111162  140  0  2   54   23   246 0.252  14.81
 3.09 Intr - 113588 113473  116  2  2   65   84   147 0.999  11.25
 3.08 Intr - 113980 113787  194  2  2   81  121   116 0.969  13.41
 3.07 Intr - 117319 117091  229  1  1   81  101   386 0.364  36.64
 3.06 Intr - 137585 137455  131  0  2  132  103    -9 0.685   5.41
 3.05 Intr - 137895 137857   39  1  0  118   74    41 0.374   3.90
 3.04 Intr - 155635 155591   45  2  0  131   78    39 0.658   5.58
 3.03 Intr - 156448 156430   19  1  1  101   64    -6 0.171  -5.52
 3.02 Intr - 157058 156921  138  2  0  131   72    24 0.311   5.76
 3.01 Init - 174749 174723   27  2  0  103   83    23 0.052   2.93
 3.00 Prom - 179212 179173   40                              -1.86

 4.05 PlyA - 179754 179749    6                               1.05
 4.04 Term - 204150 204033  118  2  1   57   40    86 0.560  -1.29
 4.03 Intr - 205400 205307   94  0  1   72   79    69 0.754   3.42
 4.02 Intr - 205676 205475  202  2  1   82  100    88 0.932   8.26
 4.01 Init - 207462 207415   48  0  0   60   70    61 0.504   2.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:100604301_100821583|GENSCAN_predicted_peptide_1|38_aa
LLYPDSGNNDDDDDDDKDYYDINYNFLETLPGNELRFV

>gi568815590r:100604301_100821583|GENSCAN_predicted_CDS_1|117_bp
ctcctctacccagattcagggaacaatgatgatgatgatgatgatgataaagattattat
gacatcaactacaattttttggagactttgccaggcaatgagctaaggtttgtatga

>gi568815590r:100604301_100821583|GENSCAN_predicted_peptide_2|453_aa
MKMHFCIPVSQQRSDALGGRYVLYSVHLDGFLFCRVRYSQLHGWNEQLDECMLRLLVAYS
CEMREPGAGGFSVKLQRMKGKFTLGPDSLFALNPLHSALTPGLQHLLSVMRVPDTGFCSS
KSPVSPVPSEAPSGSGSFLTLCCSVLLIFLLCELAGPTFSVPLDKQNQFDLCPCSCWHHP
AQIDLKKSVRETFNQLILTKLQMRPSCLRRVFGNCLPPFPPKYYLAMTTAMADERRDQLE
QYLQNVTMDPNVLRSDVFVEFLKLAQLVSLLFFNGAIIPLQDTLHEPSVQNTFDIATKKA
YLDIFLPNEQSIRIEIITSDTAERVLEHTFDEVHLQSEKCASSLPIMLACEKFRPKTLTS
SDQVVSHKIGLCRELLGYFGLFLIRFGKEGKLSVVKKLADFELPYVSLGSSEVENCKVGL
RKWYMAPSLDSVLMDCRVAVDLLYMQHFYHLPM

>gi568815590r:100604301_100821583|GENSCAN_predicted_CDS_2|1362_bp
atgaagatgcatttctgtatcccggtgtcccagcagcggtccgacgcgctggggggccgc
tacgtgctgtactccgtgcacctggacgggttcctcttctgcagggtgcgctacagccag
ctgcacggttggaacgaacagttggatgaatgcatgctgcggctcctggtcgcctacagc
tgtgagatgagggaaccgggcgcaggtggtttttcagtgaagcttcagaggatgaagggg
aagtttacccttggccccgatagtctttttgctctcaatccccttcattcagccctgacc
ccaggcctccaacatctactctctgtcatgcgagttccagacacaggattttgttccagc
aagtccccagtaagtcctgtccccagtgaggctccctcgggctctggcagctttttgacc
ctctgctgctcagtgctgctcatcttcctgctgtgtgaactggctggccccacattttct
gtgcctttagataaacaaaaccagtttgatttatgcccctgctcttgctggcaccaccct
gcccaaatagatttaaagaaatctgtgagggaaacatttaatcagctcattttgaccaag
ttacagatgaggccatcctgtctaaggcgggtctttggaaattgcctgccacccttccca
ccaaagtactatctggcaatgaccacagctatggctgatgagaggagggaccaactggaa
caatatttgcaaaatgtaaccatggacccaaacgtgttgagaagtgatgtcttcgttgag
tttttaaaactggcgcagctggtaagcttgctcttctttaatggggccatcattcctctg
caggacactcttcatgaaccaagtgtgcagaatacatttgacatcgccaccaagaaagct
tatctggacatatttctgcccaatgaacagagtattagaatcgaaattataacatcagac
actgctgaaagagtcctagagcatacatttgatgaagtacatttgcagtcagaaaaatgt
gcttcctctcttccaatcatgttggcttgtgagaaattcagacccaagacgttgacatca
tcagatcaggtggtgtcacacaaaattggactgtgtcgagagctcttgggctacttcggc
ctctttctcattcggtttggcaaggagggcaagctctctgttgtgaaaaaattggctgac
tttgaactcccttatgttagtcttggaagttctgaggtggaaaactgtaaggttggactc
cgaaagtggtatatggctccatccctcgactccgtgctgatggactgcagggtggcggta
gatttgctctacatgcagcatttctaccatctgccaatgtaa

>gi568815590r:100604301_100821583|GENSCAN_predicted_peptide_3|744_aa
MKPKTSEEVCSPLVWQYSLFPSHTLGNPVHIQALTTMTFSKSLSPTSTIFRVLGQNLYHR
PGCSHSSNMIDEDKILVDTMITKVFILVNYCPLELKIYCVHYFTPNLFLPSRQDCLWTTK
MACESALLNLVLQVAACGPAGSRAEMNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAG
PILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRK
SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAI
EKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFG
PALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTE
LKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGF
GFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNP
VINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPNTSTQTMGP
RPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLAS
APPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVA
VLQAHQAKEAAQKAVNSATGVPTV

>gi568815590r:100604301_100821583|GENSCAN_predicted_CDS_3|2235_bp
atgaagcccaagacaagtgaggaggtgtgctcacctcttgtgtggcagtactccctcttc
ccatctcatactctgggcaatcctgttcatatccaagctctgactaccatgacgttttct
aaatctctgtctccaacttcaaccattttcagggtccttggacagaatctctaccacagg
ccaggctgctcccatagttctaacatgatagatgaggacaaaatcctagttgacaccatg
ataactaaagtcttcatcctggtcaactactgtcctctggaattgaaaatttattgcgtc
cactattttactcctaacttattcctgccatcccgtcaggactgcctttggacaaccaaa
atggcctgtgagagtgctttgctaaatctagttcttcaggtcgcggcctgtggccctgcg
ggcagccgtgccgagatgaaccccagtgcccccagctaccccatggcctcgctctacgtg
ggggacctccaccccgacgtgaccgaggcgatgctctacgagaagttcagcccggccggg
cccatcctctccatccgggtctgcagggacatgatcacccgccgctccttgggctacgcg
tatgtgaacttccagcagccggcggacgcggagcgtgctttggacaccatgaattttgat
gttataaagggcaagccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaa
agtggagtaggcaacatattcattaaaaatctggacaaatccattgataataaagcactg
tatgatacattttctgcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaat
ggttccaagggctatggatttgtacactttgagacgcaggaagcagctgaaagagctatt
gaaaaaatgaatggaatgctcctaaatgatcgcaaagtatttgttggacgatttaagtct
cgtaaagaacgagaagctgaacttggagctagggcaaaagaattcaccaatgtttacatc
aagaattttggagaagacatggatgatgagcgccttaaggatctctttggcaagtttggg
cctgccttaagtgtgaaagtaatgactgatgaaagtggaaaatccaaaggatttggattt
gtaagctttgaaaggcatgaagatgcacagaaagctgtggatgagatgaacggaaaggag
ctcaatggaaaacaaatttatgttggtcgagctcagaaaaaggtggaacggcagacggaa
cttaagcgcaaatttgaacagatgaaacaagataggatcaccagataccagggtgttaat
ctttatgtgaaaaatcttgatgatggtattgatgatgaacgtctccggaaagagttttct
ccatttggtacaatcactagtgcaaaggttatgatggagggtggtcgcagcaaagggttt
ggttttgtatgtttctcctccccagaagaagccactaaagcagttacagaaatgaacggt
agaattgtggccacaaagccattgtatgtagctttagctcagcgcaaagaagagcgccag
gctcacctcactaaccagtatatgcagagaatggcaagtgtacgagctgttcccaaccct
gtaatcaacccctaccagccagcacctccttcaggttacttcatggcagctatcccacag
actcagaaccgtgctgcatactatcctcctagccaaattgctcaactaagaccaagtcct
cgctggactgctcagggtgccagacctcatcctaacacatcaacacagacaatgggtcca
cgtcctgcagctgcagccgctgcagctactcctgctgtccgcaccgttccacagtataaa
tatgctgcaggagttcgcaatcctcagcaacatcttaatgcacagccacaagttacaatg
caacagcctgctgttcatgtacaaggtcaggaacctttgactgcttccatgttggcatct
gcccctcctcaagagcaaaagcaaatgttgggtgaacggctgtttcctcttattcaagcc
atgcaccctactcttgctggtaaaatcactggcatgttgttggagattgataattcagaa
cttcttcatatgctcgagtctccagagtcactccgttctaaggttgatgaagctgtagct
gtactacaagcccaccaagctaaagaggctgcccagaaagcagttaacagtgccaccggt
gttccaactgtttaa

>gi568815590r:100604301_100821583|GENSCAN_predicted_peptide_4|153_aa
MGPKLYVVLSSPTNTSVAGKEGNKEASPSQLSQPKLGQGSEGGGDVRSAASPGRLLRFRG
LPGPLAVVVLLPNVFPVSSVFRKDPAIKGLKDLYQARPLFTGGDAAWKPAAARKQLGKSK
VLPWEKESRDKTGGNVKSQGTKSLPKLIFMEMG

>gi568815590r:100604301_100821583|GENSCAN_predicted_CDS_4|462_bp
atgggacccaagctctacgtggtgctgtccagtcccacaaacacatcagttgcggggaaa
gaggggaacaaagaagccagcccctcccagttgtctcagcctaagctaggacagggctcc
gaaggtgggggggatgtgcgtagcgctgcctctcctggccgcctcctgcgtttccgcggg
cttcccgggcccctcgctgtcgtagtattactgccaaacgtctttcctgtgtcgtctgtg
ttccgcaaagatcctgccatcaaaggtctcaaggatctctaccaagcacgcccccttttt
actggaggggacgcggcctggaagccagcggctgcccgtaaacaattagggaagagcaaa
gtgctcccctgggaaaaagaatccagggacaaaactggtggcaacgtgaaaagtcaaggg
acaaaaagtttgccgaagctgatcttcatggaaatgggatga