Result of FASTA (ccds) for pF1KB5682
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5682, 552 aa
  1>>>pF1KB5682 552 - 552 aa - 552 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.1059+/-0.000901; mu= 6.8919+/- 0.054
 mean_var=180.9090+/-36.388, 0's: 0 Z-trim(111.9): 20  B-trim: 0 in 0/53
 Lambda= 0.095355
 statistics sampled from 12729 (12744) to 12729 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.391), width:  16
 Scan time:  3.770

The best scores are:                                      opt bits E(32554)
CCDS11950.1 SMAD4 gene_id:4089|Hs108|chr18         ( 552) 3833 539.7 3.4e-153
CCDS9360.1 SMAD9 gene_id:4093|Hs108|chr13          ( 430)  493 80.2 5.7e-15
CCDS45032.1 SMAD9 gene_id:4093|Hs108|chr13         ( 467)  493 80.2 6.1e-15
CCDS75308.1 SMAD5 gene_id:4090|Hs108|chr5          ( 465)  485 79.1 1.3e-14
CCDS10222.1 SMAD3 gene_id:4088|Hs108|chr15         ( 425)  472 77.3 4.2e-14
CCDS3765.1 SMAD1 gene_id:4086|Hs108|chr4           ( 465)  471 77.2   5e-14


>>CCDS11950.1 SMAD4 gene_id:4089|Hs108|chr18              (552 aa)
 initn: 3833 init1: 3833 opt: 3833  Z-score: 2863.9  bits: 539.7 E(32554): 3.4e-153
Smith-Waterman score: 3833; 100.0% identity (100.0% similar) in 552 aa overlap (1-552:1-552)

               10        20        30        40        50        60
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 LKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSIQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 TIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLLQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLLQI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 YWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 RFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 APGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 APGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 AISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVL
              490       500       510       520       530       540

              550  
pF1KB5 HTMPIADPQPLD
       ::::::::::::
CCDS11 HTMPIADPQPLD
              550  

>>CCDS9360.1 SMAD9 gene_id:4093|Hs108|chr13               (430 aa)
 initn: 860 init1: 231 opt: 493  Z-score: 382.2  bits: 80.2 E(32554): 5.7e-15
Smith-Waterman score: 887; 35.4% identity (55.2% similar) in 542 aa overlap (7-543:3-419)

               10          20        30        40        50        
pF1KB5 MDNMSITNTPTSNDACLS--IVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLI
             ..:: :.   ..   :. :.  .:: : : .:..:..:::::::.::  .: : 
CCDS93     MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELE
                   10        20        30        40        50      

       60        70        80        90       100        110       
pF1KB5 TAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQY
        :..  : .::::::: :.:::::::. :::.::::: :.::::::... ::: .. :..
CCDS93 RALSCPG-QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEF
         60         70        80        90       100       110     

       120       130       140       150       160       170       
pF1KB5 AFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGH
        :  :   ::.:::::.:: .: .                                    
CCDS93 PFGSKQKEVCINPYHYRRVETPVL------------------------------------
         120       130                                             

       180       190       200       210       220       230       
pF1KB5 SIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGL
              ::             .:.: .:. .     :.. . .  . ::.    ::: :
CCDS93 -------PP-------------VLVPRHSEYN-----PQLSLLAKFRSASL----HSEPL
            140                    150            160           170

        240       250       260       270       280       290      
pF1KB5 L-QIASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPP
       . . :. :.  ::    .  :.  :  : .  :.:   :..:. : . ..  ::      
CCDS93 MPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASY--PHSPGSPSEPESPYQH------
              180       190       200         210       220        

        300       310       320       330       340       350      
pF1KB5 HPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDP
         . . ::  :            :..:::.::.:.. .:::::.. :    : .::..::
CCDS93 --SDFRPVCYE-----------EPQHWCSVAYYELNNRVGETFQASSRS--VLIDGFTDP
              230                  240       250         260       

         360       370       380       390       400       410     
pF1KB5 SGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLD
       :.. .::::: ::::.:. .:: .: ::::::.:   : :.:...:.:: ..::::   .
CCDS93 SNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECVSDSSIFVQSRNCN
       270       280       290       300        310       320      

         420       430       440       450       460       470     
pF1KB5 REAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSV
        . :  :. .: ::  .  .:::.        .:  :   : .. ..  :          
CCDS93 YQHGFHPA-TVCKIPSGCSLKVFN--------NQLFAQLLAQSVHHGFEV----------
        330        340               350       360                 

         480       490       500       510       520       530     
pF1KB5 GGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQL
                       : .: ..: .::::::::: .: ::..  ::::::::::  :: 
CCDS93 ----------------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQW
                       370       380       390       400       410 

         540       550    
pF1KB5 LDEVLHTMPIADPQPLD  
       ::.::  :           
CCDS93 LDKVLTQMGSPHNPISSVS
             420       430

>>CCDS45032.1 SMAD9 gene_id:4093|Hs108|chr13              (467 aa)
 initn: 741 init1: 231 opt: 493  Z-score: 381.7  bits: 80.2 E(32554): 6.1e-15
Smith-Waterman score: 947; 36.4% identity (57.8% similar) in 550 aa overlap (7-543:3-456)

               10          20        30        40        50        
pF1KB5 MDNMSITNTPTSNDACLS--IVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLI
             ..:: :.   ..   :. :.  .:: : : .:..:..:::::::.::  .: : 
CCDS45     MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELE
                   10        20        30        40        50      

       60        70        80        90       100        110       
pF1KB5 TAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQY
        :..  : .::::::: :.:::::::. :::.::::: :.::::::... ::: .. :..
CCDS45 RALSCPG-QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEF
         60         70        80        90       100       110     

       120       130       140       150       160       170       
pF1KB5 AFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGH
        :  :   ::.:::::.:: .: .           :  .. .     ... : :: .. .
CCDS45 PFGSKQKEVCINPYHYRRVETPVL-----------PPVLVPRHS---EYNPQLSLLAKFR
         120       130                  140          150       160 

       180         190         200       210           220         
pF1KB5 SIQTIQHP--PSNRASTETYSTP--ALLAPSESNATS----TANFPNIPVASTSQPASIL
       : .  ..:  : : .  .... :  . : :: :.: :    ::..:. : .: :.: :  
CCDS45 SASLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASYPHSP-GSPSEPESPY
             170       180       190       200       210        220

     230       240       250       260        270       280        
pF1KB5 GGSHSEGLLQIASGPQPGQQQNGFTGQPATYHHN-STTTWTGSRTAPYTPNLPHHQNGHL
         .::     . . : :             :: . .. : .:.   :         ..  
CCDS45 --QHS-----VDTPPLP-------------YHATEASETQSGQ---PV--------DATA
                     230                    240                    

      290       300       310       320       330       340        
pF1KB5 QHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIV
       ..:  .    : . ::  :            :..:::.::.:.. .:::::.. :    :
CCDS45 DRHVVLSIPNGDFRPVCYE-----------EPQHWCSVAYYELNNRVGETFQASSRS--V
     250       260                  270       280       290        

      350        360       370       380       390       400       
pF1KB5 TVDGYVDPSGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAV
        .::..:::.. .::::: ::::.:. .:: .: ::::::.:   : :.:...:.:: ..
CCDS45 LIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECVSDSSI
        300       310       320       330       340        350     

       410       420       430       440       450       460       
pF1KB5 FVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAG
       ::::   . . :  :. .: ::  .  .:::.        .:  :   : .. ..  :  
CCDS45 FVQSRNCNYQHGFHPA-TVCKIPSGCSLKVFN--------NQLFAQLLAQSVHHGFEV--
         360       370        380               390       400      

       470       480       490       500       510       520       
pF1KB5 NIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEI
                               : .: ..: .::::::::: .: ::..  :::::::
CCDS45 ------------------------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEI
                                  410       420       430       440

       530       540       550    
pF1KB5 HLHRALQLLDEVLHTMPIADPQPLD  
       :::  :: ::.::  :           
CCDS45 HLHGPLQWLDKVLTQMGSPHNPISSVS
              450       460       

>>CCDS75308.1 SMAD5 gene_id:4090|Hs108|chr5               (465 aa)
 initn: 701 init1: 232 opt: 485  Z-score: 375.8  bits: 79.1 E(32554): 1.3e-14
Smith-Waterman score: 937; 36.9% identity (56.5% similar) in 531 aa overlap (20-543:15-454)

               10        20        30        40        50        60
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
                          :. :.  .:: : : .:..:...::::::.::  .. :  :
CCDS75      MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKA
                    10        20        30        40        50     

               70        80        90       100        110         
pF1KB5 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQYAF
       ... : .::::::: :.:::::::. :::.::::: :.::::::... ::: .  :.. :
CCDS75 LSSPG-QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPF
          60         70        80        90       100       110    

     120       130       140         150        160       170      
pF1KB5 DLKCDSVCVNPYHYERVVSPGID--LSGLTLQSNAPSSMMVK-DEYVHDFEGQPSLSTEG
         :   ::.:::::.:: :: .   :     . :   :..:.  .  :.   .:. .:  
CCDS75 GSKQKEVCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFP
          120       130       140       150       160       170    

        180       190       200       210       220       230      
pF1KB5 HSIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEG
        :.    : :.:        ::  :.:.       . .:  : ::.. : :         
CCDS75 DSF----HQPNN--------TPFPLSPN-------SPYPPSP-ASSTYPNS---------
              180               190               200              

        240       250       260       270       280       290      
pF1KB5 LLQIASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPP
           .:::    :  . :  ::                 : :  :  : :. ..  ::  
CCDS75 --PASSGPGSPFQLPADTPPPA-----------------YMP--PDDQMGQ-DNSQPMDT
           210       220                          230        240   

        300       310         320       330       340       350    
pF1KB5 HPGHYWPVHNELAFQP--PISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYV
         .    .   .. .   :.. .  :..::::.:.:.. .:::.:.. :.   : :::..
CCDS75 SNNMIPQIMPSISSRDVQPVA-YEEPKHWCSIVYYELNNRVGEAFHASSTS--VLVDGFT
           250       260        270       280       290         300

           360       370       380       390       400       410   
pF1KB5 DPSGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYY
       :::.. .::::: ::::.:. .:: .: ::::::.:   : :.:...:::: ..::::  
CCDS75 DPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECLSDSSIFVQSRN
              310       320       330       340        350         

           420       430       440       450       460       470   
pF1KB5 LDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPG
        . . :  :  .: ::  :  .:.:.  :   :.  :...    :               
CCDS75 CNFHHGFHP-TTVCKIPSSCSLKIFN-NQEFAQLLAQSVNHGFEA---------------
     360        370       380        390       400                 

           480       490       500       510       520       530   
pF1KB5 SVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRAL
                         : .: ..: .::::::::: .: ::..  ::::::::::  :
CCDS75 ------------------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPL
                              410       420       430       440    

           540       550    
pF1KB5 QLLDEVLHTMPIADPQPLD  
       : ::.::  :           
CCDS75 QWLDKVLTQMGSPLNPISSVS
          450       460     

>>CCDS10222.1 SMAD3 gene_id:4088|Hs108|chr15              (425 aa)
 initn: 766 init1: 229 opt: 472  Z-score: 366.6  bits: 77.3 E(32554): 4.2e-14
Smith-Waterman score: 938; 37.7% identity (58.1% similar) in 530 aa overlap (19-543:11-414)

               10        20           30        40        50       
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQG---GESETFAKRAIESLVKKLKEKKDELDSL
                         ::. :.  ..:   :. : . ..:..::::::: :  .:: :
CCDS10         MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLK-KTGQLDEL
                       10        20        30        40         50 

        60        70        80        90       100        110      
pF1KB5 ITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQ
         ::::.... .::.:: :.:::::::. :::.::::: :::::::::.. ::. .. :.
CCDS10 EKAITTQNVN-TKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCE
              60         70        80        90       100       110

        120       130       140       150       160       170      
pF1KB5 YAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEG
       .::..: : ::::::::.:: .: .    .  ... :.          .:   : :.  .
CCDS10 FAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPA----------EF---PPLDDYS
              120       130       140                 150          

        180       190       200       210       220       230      
pF1KB5 HSIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEG
       :::      : :                       .:::     .  .: :         
CCDS10 HSI------PEN-----------------------TNFP-----AGIEPQS---------
       160                                         170             

        240        250       260       270       280       290     
pF1KB5 LLQIASGPQPGQ-QQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMP
         .:   : ::  ...: :..    :. . .  .::      :::               
CCDS10 --NIPETPPPGYLSEDGETSD----HQMNHSMDAGS------PNLS--------------
            180       190           200                            

         300       310       320       330       340       350     
pF1KB5 PHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVD
       :.:    :.::.: .::    .::  .::::.:.:.. .:::::.  .: : .::::..:
CCDS10 PNPMS--PAHNNLDLQPVTYCEPA--FWCSISYYELNQRVGETFH--ASQPSMTVDGFTD
      210         220       230         240         250       260  

         360       370       380       390       400       410     
pF1KB5 PSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLD
       ::...::::: ::::.:. :.: .: :::.::.:   : :.:...:::: :.::::   .
CCDS10 PSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCN
            270       280       290       300        310       320 

         420       430       440       450       460       470     
pF1KB5 REAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSV
       .. :  :. .: :: :.  .:.:.        .:. :.  : .. :              
CCDS10 QRYGWHPA-TVCKIPPGCNLKIFN--------NQEFAALLAQSVNQ--------------
              330       340               350                      

         480       490       500       510       520       530     
pF1KB5 GGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQL
        :.            .: .: :.: .::::::::: .: ::..  ::::::.::.  :: 
CCDS10 -GFE-----------AVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQW
       360                  370       380       390       400      

         540       550    
pF1KB5 LDEVLHTMPIADPQPLD  
       ::.::  :           
CCDS10 LDKVLTQMGSPSIRCSSVS
        410       420     

>>CCDS3765.1 SMAD1 gene_id:4086|Hs108|chr4                (465 aa)
 initn: 696 init1: 225 opt: 471  Z-score: 365.4  bits: 77.2 E(32554): 5e-14
Smith-Waterman score: 938; 36.3% identity (58.0% similar) in 529 aa overlap (20-543:14-454)

               10        20        30        40        50        60
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
                          :. :.  .:: : : .:..:...::::::.::  .. :  :
CCDS37       MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKA
                     10        20        30        40        50    

               70        80        90       100        110         
pF1KB5 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQYAF
       ..  : .::.:::: :.:::::::. :::.::::: :.::::::... ::: .. :.. :
CCDS37 LSCPG-QPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPF
            60        70        80        90       100       110   

     120       130       140       150       160       170         
pF1KB5 DLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSI
         :   ::.:::::.:: :: .           :  .. .     ... : :: .. ...
CCDS37 GSKQKEVCINPYHYKRVESPVL-----------PPVLVPRHS---EYNPQHSLLAQFRNL
           120       130                  140          150         

      180       190       200       210       220       230        
pF1KB5 -QTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLL
        :.  : : : .  .... :           ..  ::. :  ..: : :   :: :    
CCDS37 GQNEPHMPLNATFPDSFQQP-----------NSHPFPHSP--NSSYPNS--PGSSSSTYP
     160       170                  180         190         200    

      240         250       260       270       280       290      
pF1KB5 QIASGPQPGQ--QQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPP
       .  .. .::.  :. . :  ::    ..  :  ::.  :.  :.           ::.: 
CCDS37 HSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQ--PMDTNM---------MAPPLPS
          210       220       230       240                  250   

        300       310       320       330       340       350      
pF1KB5 HPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDP
       .        :.   :     .  :..::::.:.:.. .:::.:.. :.   : :::..::
CCDS37 EI-------NRGDVQA--VAYEEPKHWCSIVYYELNNRVGEAFHASSTS--VLVDGFTDP
                  260         270       280       290         300  

         360       370       380       390       400       410     
pF1KB5 SGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLD
       :.. .::::: ::::.:. .:: .: ::::::.:   : :.:...:::: ..::::   .
CCDS37 SNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECLSDSSIFVQSRNCN
            310       320       330       340        350       360 

         420       430       440       450       460       470     
pF1KB5 REAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSV
        . :  :  .: ::  .  .:.:.  :   :.  :...                      
CCDS37 YHHGFHP-TTVCKIPSGCSLKIFN-NQEFAQLLAQSVNH---------------------
              370       380        390                             

         480       490       500       510       520       530     
pF1KB5 GGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQL
        :.             : .: ..: .::::::::: .: ::..  ::::::::::  :: 
CCDS37 -GFET-----------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQW
       400                  410       420       430       440      

         540       550    
pF1KB5 LDEVLHTMPIADPQPLD  
       ::.::  :           
CCDS37 LDKVLTQMGSPHNPISSVS
        450       460     




552 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 17:59:39 2016 done: Thu Nov  3 17:59:39 2016
 Total Scan time:  3.770 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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