Result of FASTA (ccds) for pF1KB5663
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5663, 295 aa
  1>>>pF1KB5663 295 - 295 aa - 295 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4019+/-0.000821; mu= 10.1137+/- 0.050
 mean_var=77.8884+/-15.415, 0's: 0 Z-trim(108.4): 31  B-trim: 227 in 1/51
 Lambda= 0.145324
 statistics sampled from 10129 (10160) to 10129 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.312), width:  16
 Scan time:  2.130

The best scores are:                                      opt bits E(32554)
CCDS8191.1 CCND1 gene_id:595|Hs108|chr11           ( 295) 1948 417.6 5.6e-117
CCDS8524.1 CCND2 gene_id:894|Hs108|chr12           ( 289) 1190 258.7 3.8e-69
CCDS4863.1 CCND3 gene_id:896|Hs108|chr6            ( 292)  993 217.4   1e-56
CCDS75452.1 CCND3 gene_id:896|Hs108|chr6           ( 242)  765 169.5 2.1e-42
CCDS47426.1 CCND3 gene_id:896|Hs108|chr6           ( 211)  661 147.7 6.9e-36
CCDS47425.1 CCND3 gene_id:896|Hs108|chr6           ( 220)  408 94.7 6.7e-20
CCDS3723.1 CCNA2 gene_id:890|Hs108|chr4            ( 432)  327 77.8 1.6e-14
CCDS45031.1 CCNA1 gene_id:8900|Hs108|chr13         ( 421)  320 76.3 4.4e-14
CCDS45030.1 CCNA1 gene_id:8900|Hs108|chr13         ( 464)  320 76.3 4.8e-14
CCDS9357.1 CCNA1 gene_id:8900|Hs108|chr13          ( 465)  320 76.3 4.8e-14
CCDS12419.1 CCNE1 gene_id:898|Hs108|chr19          ( 410)  306 73.4 3.3e-13
CCDS6264.1 CCNE2 gene_id:9134|Hs108|chr8           ( 404)  302 72.5 5.7e-13
CCDS3997.1 CCNB1 gene_id:891|Hs108|chr5            ( 433)  284 68.7 8.4e-12


>>CCDS8191.1 CCND1 gene_id:595|Hs108|chr11                (295 aa)
 initn: 1948 init1: 1948 opt: 1948  Z-score: 2213.6  bits: 417.6 E(32554): 5.6e-117
Smith-Waterman score: 1948; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295)

               10        20        30        40        50        60
pF1KB5 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 AEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 HAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCD
              190       200       210       220       230       240

              250       260       270       280       290     
pF1KB5 PDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
              250       260       270       280       290     

>>CCDS8524.1 CCND2 gene_id:894|Hs108|chr12                (289 aa)
 initn: 1176 init1: 1059 opt: 1190  Z-score: 1354.9  bits: 258.7 E(32554): 3.8e-69
Smith-Waterman score: 1190; 61.8% identity (81.9% similar) in 293 aa overlap (4-295:2-289)

               10        20         30        40        50         
pF1KB5 MEHQLLCCEVETIRRAYPDANLL-NDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKI
          .::: ::. .:::  : ::: .::::. .:  ::   :. ::::::::.. : ::..
CCDS85   MELLCHEVDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYMRRM
                 10        20        30        40        50        

      60        70        80        90       100       110         
pF1KB5 VATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPL
       ::::::::::::::::::::::::::::::.  :. ::.::::::.:::.:::.::: ::
CCDS85 VATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLASKLKETSPL
       60        70        80        90       100       110        

     120       130       140       150       160       170         
pF1KB5 TAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIR
       :::::::::::::.:.:::. ::....::::::::.::::::::.: :.:. .:. ..::
CCDS85 TAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIR
      120       130       140       150       160       170        

     180       190       200       210       220       230         
pF1KB5 KHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKC
       ::::::.:::::: ::   ::::.:.::: ::. ::.     . :.   ::..:... . 
CCDS85 KHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVSSLTCDALTELLAKITNT
      180       190       200       210       220       230        

     240       250       260       270       280       290     
pF1KB5 DPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
       : :::.::::::::.: .::.: .:..     ..  . :.:.: : :::::::.:.
CCDS85 DVDCLKACQEQIEAVLLNSLQQYRQDQ-----RDGSKSEDELDQASTPTDVRDIDL
      240       250       260            270       280         

>>CCDS4863.1 CCND3 gene_id:896|Hs108|chr6                 (292 aa)
 initn: 989 init1: 809 opt: 993  Z-score: 1131.6  bits: 217.4 E(32554): 1e-56
Smith-Waterman score: 993; 51.9% identity (75.9% similar) in 295 aa overlap (4-295:2-292)

                10        20         30        40        50        
pF1KB5 MEHQLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRK
          .::::: ..   :: ::  ::.: :::...:. ::  .: .:::.:::.:. : :::
CCDS48   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRK
                 10        20        30        40        50        

       60        70        80        90       100       110        
pF1KB5 IVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIP
       ..: :::::::::.:::::::::::::::.::  :..:..::::::.::..:::..:: :
CCDS48 MLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTP
       60        70        80        90       100       110        

      120       130       140       150       160       170        
pF1KB5 LTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQII
       :: ::::::::... :..: . :.:...::::.:::.  :::.  .: ..   .. . ..
CCDS48 LTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALV
      120       130       140       150       160       170        

      180       190       200       210       220       230        
pF1KB5 RKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIK
       .::::::.::::::  :   ::::.:.::. ::::::.  :    .:  .::..:. .  
CCDS48 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITG
      180       190       200       210           220       230    

      240       250       260        270       280       290     
pF1KB5 CDPDCLRACQEQIEALLESSLRQAQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
        . :::::::::::: :. :::.:.: . .:     .    .  . . :::::  . .
CCDS48 TEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
          240       250       260       270       280       290  

>>CCDS75452.1 CCND3 gene_id:896|Hs108|chr6                (242 aa)
 initn: 785 init1: 635 opt: 765  Z-score: 874.6  bits: 169.5 E(32554): 2.1e-42
Smith-Waterman score: 765; 51.3% identity (75.7% similar) in 230 aa overlap (67-295:17-242)

         40        50        60        70        80        90      
pF1KB5 TCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKK
                                     :::::.:::::::::::::::.::  :..:
CCDS75               MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK
                             10        20        30        40      

        100       110       120       130       140       150      
pF1KB5 SRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMT
       ..::::::.::..:::..:: ::: ::::::::... :..: . :.:...::::.:::. 
CCDS75 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI
         50        60        70        80        90       100      

        160       170       180       190       200       210      
pF1KB5 PHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLN
        :::.  .: ..   .. . ...::::::.::::::  :   ::::.:.::. ::::::.
CCDS75 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG
        110       120       130       140       150       160      

        220       230       240       250       260        270     
pF1KB5 LRSPNNFLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQ-NMDPKAAEEEE
         :    .:  .::..:. .   . :::::::::::: :. :::.:.: . .:     . 
CCDS75 ACS----MSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRG
            170       180       190       200       210       220  

         280       290     
pF1KB5 EEEEEVDLACTPTDVRDVDI
          .  . . :::::  . .
CCDS75 SSSQGPSQTSTPTDVTAIHL
            230       240  

>>CCDS47426.1 CCND3 gene_id:896|Hs108|chr6                (211 aa)
 initn: 681 init1: 531 opt: 661  Z-score: 757.8  bits: 147.7 E(32554): 6.9e-36
Smith-Waterman score: 661; 48.4% identity (74.0% similar) in 215 aa overlap (82-295:1-211)

              60        70        80        90       100       110 
pF1KB5 VLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS
                                     ::::::.::  :..:..::::::.::..::
CCDS47                               MNYLDRYLSCVPTRKAQLQLLGAVCMLLAS
                                             10        20        30

             120       130       140       150       160       170 
pF1KB5 KMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEA
       :..:: ::: ::::::::... :..: . :.:...::::.:::.  :::.  .: ..   
CCDS47 KLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLP
               40        50        60        70        80        90

             180       190       200       210       220       230 
pF1KB5 EENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTR
       .. . ...::::::.::::::  :   ::::.:.::. ::::::.  :    .:  .::.
CCDS47 RDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTE
              100       110       120       130           140      

             240       250       260        270       280       290
pF1KB5 FLSRVIKCDPDCLRACQEQIEALLESSLRQAQQ-NMDPKAAEEEEEEEEEVDLACTPTDV
       .:. .   . :::::::::::: :. :::.:.: . .:     .    .  . . :::::
CCDS47 LLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDV
        150       160       170       180       190       200      

            
pF1KB5 RDVDI
         . .
CCDS47 TAIHL
        210 

>>CCDS47425.1 CCND3 gene_id:896|Hs108|chr6                (220 aa)
 initn: 488 init1: 278 opt: 408  Z-score: 470.8  bits: 94.7 E(32554): 6.7e-20
Smith-Waterman score: 480; 34.9% identity (53.6% similar) in 295 aa overlap (4-295:2-220)

                10        20         30        40        50        
pF1KB5 MEHQLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRK
          .::::: ..   :: ::  ::.: :::...:. ::  .: .:::.:::.:. : :::
CCDS47   MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRK
                 10        20        30        40        50        

       60        70        80        90       100       110        
pF1KB5 IVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIP
       ..: ::::                                                    
CCDS47 MLAYWMLE----------------------------------------------------
       60                                                          

      120       130       140       150       160       170        
pF1KB5 LTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQII
                           . :.:...::::.:::.  :::.  .: ..   .. . ..
CCDS47 --------------------DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALV
                             70        80        90       100      

      180       190       200       210       220       230        
pF1KB5 RKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIK
       .::::::.::::::  :   ::::.:.::. ::::::.  :    .:  .::..:. .  
CCDS47 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITG
        110       120       130       140           150       160  

      240       250       260        270       280       290     
pF1KB5 CDPDCLRACQEQIEALLESSLRQAQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
        . :::::::::::: :. :::.:.: . .:     .    .  . . :::::  . .
CCDS47 TEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL
            170       180       190       200       210       220

>>CCDS3723.1 CCNA2 gene_id:890|Hs108|chr4                 (432 aa)
 initn: 277 init1: 277 opt: 327  Z-score: 374.1  bits: 77.8 E(32554): 1.6e-14
Smith-Waterman score: 327; 30.2% identity (61.9% similar) in 252 aa overlap (18-265:176-415)

                            10        20        30        40       
pF1KB5              MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKC
                                     :: .      :: :   :  : :.:.:.: 
CCDS37 YPMDGSFESPHTMDMSIILEDEKPVSVNEVPDYHEDIHTYLREM---EVKCKPKVGYMKK
         150       160       170       180          190       200  

        50        60        70        80        90       100       
pF1KB5 VQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCM
        : ..  ::: :.. :..:: :: : ..:.. ::.::.:::::   : ...:::.:.. :
CCDS37 -QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAM
             210       220       230       240       250       260 

       110       120       130       140       150       160       
pF1KB5 FVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFI-EHFLS
       ..:::..:  :  . ..   ::..   ...:.:: :... : ..::: : ..:. ..:: 
CCDS37 LLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLH
             270       280       290       300       310       320 

        170       180       190        200       210        220    
pF1KB5 KMPEAEENKQIIRKHAQTFVALCATDVK-FISNPPSMVAAGSVVAAVQGLNLRS-PNNFL
       ..:   .    ... :. .  :   :.  ...  ::..:...   :.  .. .: :....
CCDS37 QQPANCK----VESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQSWPESLI
                 330       340       350       360       370       

          230        240       250       260       270       280   
pF1KB5 SYYRLTRFLSRVIK-CDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDL
          : : .  . .: :  : :.    .     ..:.:.  .:                  
CCDS37 ---RKTGYTLESLKPCLMD-LHQTYLKAPQHAQQSIREKYKNSKYHGVSLLNPPETLNL 
          380       390        400       410       420       430   

           290     
pF1KB5 ACTPTDVRDVDI

>>CCDS45031.1 CCNA1 gene_id:8900|Hs108|chr13              (421 aa)
 initn: 266 init1: 266 opt: 320  Z-score: 366.4  bits: 76.3 E(32554): 4.4e-14
Smith-Waterman score: 320; 29.2% identity (66.2% similar) in 216 aa overlap (25-239:169-378)

                     10        20        30        40        50    
pF1KB5       MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLP
                                     ... . . .::    :.. :.:  : ..  
CCDS45 SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKK-QPDITE
      140       150       160       170       180       190        

           60        70        80        90       100       110    
pF1KB5 SMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMK
       .:: :.. :..:: :: : . :.. ::.:.::::::   : ...:::.:.. :..:::..
CCDS45 GMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYE
       200       210       220       230       240       250       

          120       130       140       150       160       170    
pF1KB5 ETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEEN
       :  :  ....   ::..   ..::.:: ::.. : ..:.. : ..:. ..: ..    ..
CCDS45 EIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRT
       260       270       280       290       300       310       

          180       190       200       210        220       230   
pF1KB5 KQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRS-PNNFLSYYRLTRFL
       ... .  :.  ..:  .:  :..  ::..::..   :   .: .  :... ..   .  :
CCDS45 ENLAKYVAE--LSLLEAD-PFLKYLPSLIAAAAFCLANYTVNKHFWPETLAAFTGYS--L
       320         330        340       350       360       370    

           240       250       260       270       280       290   
pF1KB5 SRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDV
       :... :                                                      
CCDS45 SEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLLQ           
            380       390       400       410       420            

>>CCDS45030.1 CCNA1 gene_id:8900|Hs108|chr13              (464 aa)
 initn: 266 init1: 266 opt: 320  Z-score: 365.7  bits: 76.3 E(32554): 4.8e-14
Smith-Waterman score: 320; 29.2% identity (66.2% similar) in 216 aa overlap (25-239:212-421)

                     10        20        30        40        50    
pF1KB5       MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLP
                                     ... . . .::    :.. :.:  : ..  
CCDS45 SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKK-QPDITE
             190       200       210       220       230        240

           60        70        80        90       100       110    
pF1KB5 SMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMK
       .:: :.. :..:: :: : . :.. ::.:.::::::   : ...:::.:.. :..:::..
CCDS45 GMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYE
              250       260       270       280       290       300

          120       130       140       150       160       170    
pF1KB5 ETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEEN
       :  :  ....   ::..   ..::.:: ::.. : ..:.. : ..:. ..: ..    ..
CCDS45 EIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRT
              310       320       330       340       350       360

          180       190       200       210        220       230   
pF1KB5 KQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRS-PNNFLSYYRLTRFL
       ... .  :.  ..:  .:  :..  ::..::..   :   .: .  :... ..   .  :
CCDS45 ENLAKYVAE--LSLLEAD-PFLKYLPSLIAAAAFCLANYTVNKHFWPETLAAFTGYS--L
                370        380       390       400       410       

           240       250       260       270       280       290   
pF1KB5 SRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDV
       :... :                                                      
CCDS45 SEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLLQ           
         420       430       440       450       460               

>>CCDS9357.1 CCNA1 gene_id:8900|Hs108|chr13               (465 aa)
 initn: 266 init1: 266 opt: 320  Z-score: 365.7  bits: 76.3 E(32554): 4.8e-14
Smith-Waterman score: 320; 29.2% identity (66.2% similar) in 216 aa overlap (25-239:213-422)

                     10        20        30        40        50    
pF1KB5       MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLP
                                     ... . . .::    :.. :.:  : ..  
CCDS93 SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKK-QPDITE
            190       200       210       220       230        240 

           60        70        80        90       100       110    
pF1KB5 SMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMK
       .:: :.. :..:: :: : . :.. ::.:.::::::   : ...:::.:.. :..:::..
CCDS93 GMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYE
             250       260       270       280       290       300 

          120       130       140       150       160       170    
pF1KB5 ETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEEN
       :  :  ....   ::..   ..::.:: ::.. : ..:.. : ..:. ..: ..    ..
CCDS93 EIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRT
             310       320       330       340       350       360 

          180       190       200       210        220       230   
pF1KB5 KQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRS-PNNFLSYYRLTRFL
       ... .  :.  ..:  .:  :..  ::..::..   :   .: .  :... ..   .  :
CCDS93 ENLAKYVAE--LSLLEAD-PFLKYLPSLIAAAAFCLANYTVNKHFWPETLAAFTGYS--L
             370          380       390       400       410        

           240       250       260       270       280       290   
pF1KB5 SRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDV
       :... :                                                      
CCDS93 SEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLLQ           
        420       430       440       450       460                




295 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 17:54:14 2016 done: Thu Nov  3 17:54:15 2016
 Total Scan time:  2.130 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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