GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:43:08

Sequence gi568815594r:138071959_138342069 : 270111 bp : 36.50% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10900  11022  123  2  0   19   60   139 0.233   3.84
 1.02 Intr +  19771  19904  134  2  2    7   61   155 0.106   4.14
 1.03 Intr +  51630  51723   94  2  1   60   61    74 0.118   0.52
 1.04 Intr +  54823  54950  128  2  2   76   46    96 0.140   3.68
 1.05 Intr +  59129  59219   91  1  1   36   64    80 0.099  -0.95
 1.06 Intr +  66926  67093  168  0  0   87   31   139 0.115   7.10
 1.07 Intr +  87850  87934   85  2  1  127   94   -26 0.197  -0.14
 1.08 Term + 103703 103883  181  2  1  100   43   137 0.789   6.50
 1.09 PlyA + 103950 103955    6                               1.05

 2.12 PlyA - 104221 104216    6                               1.05
 2.11 Term - 104303 104295    9  2  0   94   48     0 0.014  -6.18
 2.10 Intr - 108832 108683  150  1  0  107   86    39 0.360   5.04
 2.09 Intr - 110435 110339   97  1  1   91   23    85 0.508   1.39
 2.08 Intr - 111347 111244  104  2  2   89  109    49 0.978   5.15
 2.07 Intr - 113286 113163  124  2  1   79  103   112 0.917  11.47
 2.06 Intr - 142671 142627   45  2  0   91  106    74 0.666   6.11
 2.05 Intr - 147407 147308  100  0  1   69  119    45 0.527   3.95
 2.04 Intr - 151366 151241  126  2  0  116   86   -18 0.309   0.53
 2.03 Intr - 160424 160309  116  1  2   76   78   117 0.641   8.67
 2.02 Intr - 164493 164367  127  1  1   30  107    73 0.209   2.22
 2.01 Init - 170111 169835  277  2  1   55   97   127 0.075   7.50
 2.00 Prom - 171556 171517   40                              -6.25

 3.09 PlyA - 173368 173363    6                               1.05
 3.08 Term - 184866 184540  327  0  0  114   49   163 0.741   8.72
 3.07 Intr - 216306 216210   97  2  1  118   75   -10 0.004  -0.21
 3.06 Intr - 220527 220437   91  1  1   87   31    47 0.016  -2.97
 3.05 Intr - 223432 223316  117  2  0   80   68    43 0.154   1.02
 3.04 Intr - 231748 231577  172  1  1  104   63    48 0.089   2.49
 3.03 Intr - 242530 242357  174  1  0   27  101    86 0.491   3.01
 3.02 Intr - 249028 248912  117  1  0  117   36    71 0.740   4.54
 3.01 Init - 256244 256239    6  2  0   98   71    10 0.615   0.66
 3.00 Prom - 258375 258336   40                              -0.45

 4.02 PlyA - 259098 259093    6                               1.05
 4.01 Sngl - 262288 261938  351  1  0    9   40   211 0.175   4.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:138071959_138342069|GENSCAN_predicted_peptide_1|334_aa
XQSVNQFSEVLPETITSIKAIQNVARGLVVVCKLLPIHSKIGEPEDTKNLYVAAYKDGPQ
EHFMVNGLLSGRNAGQLLCRNCEKGQQPSEAHTGEHQQGIHLHESPLGGLTVRDWIAAPA
LAQRSPSVAQNEAPEGASHKPWLFPHGIKSAGAQNARVKELPDVQTEEHHPGIHLHESPF
GGFTVRGQIAGRTKEANLVVMWKQGCVEVEVQNRQGSMSVYGELSATGSRRNQGEHKCDN
LEENCLCKPFYLLWTHFLNPKMEVRLVICLIHSHRNAIKQKVVQYWHPVAGEIYQISENL
SSLDSEHSLAVSSQQPFTIFRVLFGYLSFFMETT

>gi568815594r:138071959_138342069|GENSCAN_predicted_CDS_1|1005_bp
naacaatctgttaatcaattctccgaagttctaccagagacaataacctccatcaaagcc
attcaaaatgtggcccgtggactggtggtggtctgcaaactgctaccaatccacagcaag
ataggtgaaccagaggacacaaagaacctctatgtggcagcctacaaagacgggccccag
gagcacttcatggtcaatggtctcttatcaggaaggaatgctggtcagttgctgtgtcga
aactgtgaaaagggccagcagccatcagaggcccacacaggagagcaccagcaggggatc
cacctgcatgagtctcctctaggtggtctcactgttagggattggattgcagctccagcc
ttggctcaaaggagcccaagtgtagctcagaatgaagctccagagggtgcaagccataag
ccttggctgtttccacatggtattaagtctgcaggtgctcagaatgcacgtgtgaaagag
ctaccagatgtccagacagaagagcatcacccagggattcacctgcatgagtctcctttc
ggtggcttcacagtcaggggtcagattgcaggtagaacaaaggaggctaatttagttgtc
atgtggaaacaaggatgtgtagaagtggaggtacagaatagacaaggaagcatgagtgtt
tatggagagctttcagcaacaggaagcagaaggaatcaaggagagcacaaatgtgacaat
ctggaagagaattgcctctgcaagccattttacttactttggactcattttcttaatcca
aaaatggaagtaaggcttgtcatctgtcttattcatagtcacagaaatgctatcaaacaa
aaagtggttcaatactggcatcctgtggctggagagatttatcaaatctctgaaaatctc
agctccttggattctgaacattccctggctgtcagttctcagcagcctttcaccattttc
cgagtgctatttggttacctctcatttttcatggaaacaacctag

>gi568815594r:138071959_138342069|GENSCAN_predicted_peptide_2|424_aa
MVRKPVVSTISKGGYLQGNVNGRLPSLGNKEPPGQEKVQLKRKVTLLRGVSIIIGTIIGA
GIFISPKGVLQNTGSVGMSLTIWTVCGVLSLFGALSYAELGTTIKKSGGHYTYILEVFGP
LPAFVRVWVELLIIRPAATAVISLAFGRYILEPFFIQCEIPELAIKLITAVGITVVMVLN
SMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTQNFKDAFSGRDSSITRLPLAFY
YGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVLTNVAYFTTINAEELLLS
NAVAVTFSERLLGNFSLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSMIHV
RKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSFARWLFIGLAVAGLIYLRYKCPDMHRP
FKLP

>gi568815594r:138071959_138342069|GENSCAN_predicted_CDS_2|1275_bp
atggtcagaaagcctgttgtgtccaccatctccaaaggaggttacctgcagggaaatgtt
aacgggaggctgccttccctgggcaacaaggagccacctgggcaggagaaagtgcagctg
aagaggaaagtcactttactgaggggagtctccattatcattggcaccatcattggagca
ggaatcttcatctctcctaagggcgtgctccagaacacgggcagcgtgggcatgtctctg
accatctggacggtgtgtggggtcctgtcactatttggagctttgtcttatgctgaattg
ggaacaactataaagaaatctggaggtcattacacatatattttggaagtctttggtcca
ttaccagcttttgtacgagtctgggtggaactcctcataatacgccctgcagctactgct
gtgatatccctggcatttggacgctacattctggaaccattttttattcaatgtgaaatc
cctgaacttgcgatcaagctcattacagctgtgggcataactgtagtgatggtcctaaat
agcatgagtgtcagctggagcgcccggatccagattttcttaaccttttgcaagctcaca
gcaattctgataattatagtccctggagttatgcagctaattaaaggtcaaacgcagaac
tttaaagacgccttttcaggaagagattcaagtattacgcggttgccactggctttttat
tatggaatgtatgcatatgctggctggttttacctcaactttgttactgaagaagtagaa
aaccctgaaaaaaccattccccttgcaatatgtatatccatggccattgtcaccattggc
tatgtgctgacaaatgtggcctactttacgaccattaatgctgaggagctgctgctttca
aatgcagtggcagtgaccttttctgagcggctactgggaaatttctcattagcagttccg
atctttgttgccctctcctgctttggctccatgaacggtggtgtgtttgctgtctccagg
ttattctatgttgcgtctcgagagggtcaccttccagaaatcctctccatgattcatgtc
cgcaagcacactcctctaccagctgttattgttttgcaccctttgacaatgataatgctc
ttctctggagacctcgacagtcttttgaatttcctcagttttgccaggtggctttttatt
gggctggcagttgctgggctgatttatcttcgatacaaatgcccagatatgcatcgtcct
ttcaagctgccttga

>gi568815594r:138071959_138342069|GENSCAN_predicted_peptide_3|366_aa
MKTSLGTPGEGKLTGPLKLNHYNLSRELANFTLLLHLEQLGTYMWSTSIEKRLNITDIRE
MQIKTTSHKSEWLLIKSQKVTVADKVTEERKHLYIVGGNHFLLVCFGKMSCYVMGCPMER
PMWQGAESGLGPIAGGELRPSLIAYEELYPASNQVPRSDPAYHTTFSYQISFVSCVTVSL
AFLVFDDLDSVEYWTDTPRGVFFVDDNHCIWIGTMWPSLVPACTPIPPNILPEFIVTLTK
IHFHLHFPSFRNNFPSHQVSKHYLIFTSSASQCLLLTNVNKVVVYLTHNFFNAASPAGIL
HSQWRFCPGFAGATGPWHLDERETVAPQNSEMPATVEFQGVLQLLLRESRGLSPKEVLQL
SFIPAA

>gi568815594r:138071959_138342069|GENSCAN_predicted_CDS_3|1101_bp
atgaagacctcacttggaacccctggagaaggaaaattaacaggccccctgaagctgaac
cactacaacctttcaagggaattggctaatttcactttgctgctccatttggagcagctg
gggacatacatgtggtcaacaagcattgaaaaaaggctcaatatcactgacattagagaa
atgcaaatcaaaaccacctcacacaagtcagaatggctgttgataaaaagtcaaaaagta
actgttgctgacaaggttacagaggaaaggaaacacttgtacattgttggtgggaatcac
tttttgcttgtgtgttttggtaagatgagttgctacgttatgggctgccctatggaaaga
cccatgtggcaaggagctgagagtggcctcgggccaatagctggtggggaactgaggccc
agtctaatagcctatgaagaactgtatcctgccagcaaccaagttccaagatctgatcca
gcataccacactacatttagctatcaaatctcctttgtttcctgtgtgacagtttctctg
gctttccttgtttttgatgaccttgacagtgttgagtactggacagacaccccaaggggt
gtcttctttgtggatgataatcactgtatttggattggaacaatgtggccttctttagtg
cctgcatgcacacccataccccccaacatactgccagagttcatcgtcacactaaccaaa
atccacttccatctccatttcccaagttttagaaataacttcccaagtcaccaggtaagt
aaacactacttgattttcacaagcagcgccagtcaatgtttattattgacaaatgtcaac
aaagtggttgtgtacctgacacacaattttttcaatgctgcttcaccagccggaattctc
cacagccagtggcgcttctgcccaggctttgctggggccactgggccctggcatctggac
gagagggagacagtggcaccccaaaactcggagatgccagcaactgtggagttccaaggg
gtgttacagcttttgctcagggagtcccgaggtctgagccccaaggaagtgttacagctc
tctttcattcctgctgcctga

>gi568815594r:138071959_138342069|GENSCAN_predicted_peptide_4|116_aa
MVGHKNNLVECSSWSHEKYGQTLGRNSILLVMSSGLADSEIFKMQSTGKLCKIQEPSSLC
TTASSYICAIWLKVITVTTEENNTPNYPLSFSWQNRETKHKENLHYFIEITCINAR

>gi568815594r:138071959_138342069|GENSCAN_predicted_CDS_4|351_bp
atggttggacataaaaataatcttgtggaatgtagttcttggagccatgagaaatatggg
cagaccctgggaagaaatagcatcctattggtgatgtcttcagggcttgctgactcagaa
atcttcaaaatgcagagcacaggaaagctgtgcaagatccaagaaccctcttcactttgc
acaactgcttcctcatatatttgtgccatctggttgaaagtgattactgtgactaccgag
gaaaataataccccaaattatccactcagcttcagttggcagaacagagaaacaaagcat
aaagaaaatttgcattatttcattgagattacatgtatcaatgcaaggtga