GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:40:23

Sequence gi568815593r:149405482_149650964 : 245483 bp : 45.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1560   1597   38  1  2   71  121    38 0.296   3.38
 1.02 Intr +  15000  15122  123  2  0  105   37    91 0.716   6.48
 1.03 Term +  15200  15349  150  1  0  103   53   123 0.478   8.21
 1.04 PlyA +  20153  20158    6                               1.05

 2.13 PlyA -  20752  20747    6                               1.05
 2.12 Term -  26023  25974   50  2  2   84   54    62 0.133  -0.13
 2.11 Intr -  41875  41741  135  2  0  119   60    13 0.027   2.14
 2.10 Intr -  66613  66441  173  0  2   66   78   102 0.004   6.59
 2.09 Intr -  98638  98524  115  2  1   61   82    15 0.237  -2.29
 2.08 Intr - 100114  99966  149  0  2   70   96    65 0.903   5.38
 2.07 Intr - 101652 101546  107  0  2   57   82    60 0.895   1.31
 2.06 Intr - 104472 104398   75  0  0   95  115    34 0.901   6.51
 2.05 Intr - 106391 106313   79  1  1   90   92   -44 0.786  -4.25
 2.04 Intr - 107728 107589  140  1  2   57  107   103 0.949   8.36
 2.03 Intr - 114907 114809   99  1  0  133   96   -20 0.912   3.61
 2.02 Intr - 119690 119564  127  1  1  106   91    27 0.895   5.48
 2.01 Init - 123102 123074   29  0  2   96   60    23 0.597  -0.63
 2.00 Prom - 134751 134712   40                              -3.86

 3.07 PlyA - 138088 138083    6                               1.05
 3.06 Term - 140350 140081  270  1  0   39   38   217 0.709   7.28
 3.05 Intr - 144340 144233  108  1  0   77   50    97 0.324   5.28
 3.04 Intr - 144469 144457   13  0  1   47   95     7 0.498  -7.92
 3.03 Intr - 144700 144594  107  1  2  137  107    98 0.730  15.61
 3.02 Intr - 145484 145361  124  1  1  100   74   200 0.847  20.39
 3.01 Init - 157580 157426  155  2  2   90   75    36 0.461   1.96
 3.00 Prom - 161121 161082   40                              -3.16

 4.00 Prom + 161388 161427   40                              -5.76
 4.01 Init + 169107 169293  187  2  1   44   66   107 0.705   3.32
 4.02 Intr + 175976 176143  168  0  0   35  100    72 0.340   3.02
 4.03 Term + 176899 176966   68  2  2   39   29   138 0.408   1.10
 4.04 PlyA + 177090 177095    6                               1.05

 5.03 PlyA - 178165 178160    6                               1.05
 5.02 Term - 193048 192773  276  1  0  -52   47   519 0.548  29.26
 5.01 Init - 193806 193771   36  0  0   51   35    62 0.535  -4.06
 5.00 Prom - 194909 194870   40                              -3.56

 6.00 Prom + 194919 194958   40                             -10.74
 6.01 Init + 194978 194983    6  1  0   79   66     4 0.547  -1.96
 6.02 Intr + 195627 195750  124  2  1  110   99   111 0.905  14.56
 6.03 Intr + 204067 204214  148  2  1  129   59   270 0.743  27.49
 6.04 Intr + 211086 211285  200  0  2   76   82   267 0.587  23.89
 6.05 Intr + 212695 212825  131  2  2  108   84   204 0.996  22.41
 6.06 Intr + 213457 213561  105  0  0   48   94   157 0.991  12.71
 6.07 Intr + 214873 214983  111  0  0   43   59    82 0.721   1.38
 6.08 Intr + 216252 216581  330  2  0  108  110   353 0.981  35.33
 6.09 Intr + 218531 218659  129  1  0   70   82    64 0.848   4.89
 6.10 Intr + 221595 221790  196  2  1   80   71   256 0.965  22.09
 6.11 Intr + 223328 223485  158  0  2   87  109    60 0.996   7.73
 6.12 Intr + 226501 226639  139  0  1  108  -14   190 0.468  10.84
 6.13 Intr + 229628 229741  114  0  0   65   86    44 0.268   2.32
 6.14 Term + 230060 230094   35  0  2  110   37    22 0.360  -2.95
 6.15 PlyA + 230717 230722    6                               1.05

 7.04 PlyA - 230979 230974    6                               1.05
 7.03 Term - 233014 232679  336  1  0   61   49   134 0.668   1.37
 7.02 Intr - 235667 235518  150  2  0   53  119    66 0.896   6.56
 7.01 Intr - 239201 239108   94  1  1   42   65   100 0.602   3.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_1|103_aa
XPKEPHLDQTPGKTCGGNPTALEPKESNGCNKCTGLSALRQGNRGQRGPSRKSWMWPIPS
PSCFLEMRKSRKGHRGFRNDRGDDSFDVWSSSRPLPTPKRKLD

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_1|312_bp
ngccccaaggagccacacctggaccagaccccaggaaagacatgtggtggaaaccctacg
gccctggagcccaaggagagcaacggctgtaacaagtgcacaggtttgagtgcgctgaga
caggggaaccgtgggcaaagaggtccctccagaaagagctggatgtggcccattcccagc
ccctcgtgtttcttggaaatgagaaagtccaggaaagggcacaggggctttcgcaacgac
cgtggcgatgatagctttgacgtgtggtcatccagccggccactgcccacacccaagaga
aagctggattga

>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_2|425_aa
MEVKVETKNKWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYV
HTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARY
ASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEV
LCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQ
QAASSSGQGQQAQTPTGKQTDKTKSNMKVGIVAPFECFNHRITNHSAKKFIMCYVANVTE
KQSYHFSLPPVNGHHPGRHPREGAMLQVKTALSCQSVVPGTCRSPSSPSPTVIGSLLGSW
VREGGGEHNAQACLIGVMVMNLDLFMVQFGPLRDSPGTFANLSGGAVGRDLRKEGFEDEP
ACGSK

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_2|1278_bp
atggaggtgaaggtagaaactaagaataagtggtatggtcaggaaaaagactacaatgta
ctagtcatggatcttctgggacctagcctcgaagacctcttcaatttctgttcaagaagg
ttcacaatgaaaactgtacttatgttagctgaccagatgatcagtagaattgaatatgtg
catacaaagaattttatacacagagacattaaaccagataacttcctaatgggtattggg
cgtcactgtaataagttattccttattgattttggtttggccaaaaagtacagagacaac
aggacaaggcaacacataccatacagagaagataaaaacctcactggcactgcccgatat
gctagcatcaatgcacatcttggtattgagcagagtcgccgagatgacatggaatcatta
ggatatgttttgatgtattttaatagaaccagcctgccatggcaagggctaaaggctgca
acaaagaaacaaaaatatgaaaagattagtgaaaagaagatgtccacgcctgttgaagtt
ttatgtaaggggtttcctgcagaatttgcgatgtacttaaactattgtcgtgggctacgc
tttgaggaagccccagattacatgtatctgaggcagctattccgcattcttttcaggacc
ctgaaccatcaatatgactacacatttgattggacaatgttaaagcagaaagcagcacag
caggcagcctcttccagtgggcagggtcagcaggcccaaacccccacaggcaagcaaact
gacaaaaccaagagtaacatgaaagttgggatagttgctccttttgagtgttttaatcat
cgtataactaatcatagtgccaagaagttcataatgtgttatgtagctaatgtcactgaa
aaacagtcctaccattttagccttccccctgtgaatggacatcacccgggccggcacccc
cgagaaggtgctatgctgcaggtaaagactgctttgtcctgccagagcgtggttcctgga
acttgtcgcagtcccagtagtccttcccccacagtgatcggctccctcttgggttcctgg
gtgcgggaaggagggggtgagcacaatgctcaggcctgtctaattggagtcatggtgatg
aatctggatttgttcatggttcagtttgggccattaagagacagccctgggacttttgct
aacttaagtggtggggcggtggggagggatctacgtaaggagggctttgaggatgaacca
gcctgtggaagtaaatga

>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_3|258_aa
MKMGADSQNCGNSGTTGSQTLMEHQAAELRFIELQMNYVNEPRGEGDDLSQMMASSSGSK
AEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQ
GGVGIPHIRWWFPLCVQVIFDPYAEGLAAAFFTAALLMYLGLSSEVDLKALGEPRLKVQT
WPSPRTTPHTTSPENGTEMVGSRFLRNMHFAKKHKKGLKKMQANNAKAMSALAEASRALV
KPKEVKPKIPKGVSCELD

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_3|777_bp
atgaagatgggtgctgactctcaaaactgtgggaattcaggcacaactggaagtcagacc
ctgatggaacaccaagcggcagaattgagatttattgagctgcagatgaactatgtaaat
gagccaaggggggagggggatgatttaagtcaaatgatggcgagtagcagcggctccaag
gctgaattcattgtcggagggaaatataaactggtacggaagatcgggtctggctccttc
ggggacatctatttggcgatcaacatcaccaacggcgaggaagtggcagtgaagctagaa
tctcagaaggccaggcatccccagttgctgtacgagagcaagctctataagattcttcaa
ggtggggttggcatcccccacatacgctggtggtttcctttatgcgtgcaggtcatcttt
gatccctacgcggaagggttggctgctgccttttttacggcggcacttctgatgtactta
ggtttgtccagtgaagtggatttgaaggcacttggagagccgcggcttaaggtacagaca
tggccaagtccacgaaccacaccacacacaaccagtcctgaaaatggcacagaaatggtg
ggctccaggttcctgaggaacatgcactttgccaagaagcacaagaagggcctaaagaag
atgcaggccaacaatgccaaggcaatgagtgcacttgctgaggctagcagggccctcgta
aagcccaaggaggttaagcccaagatcccaaagggtgtcagctgcgaactcgattga

>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_4|140_aa
MYNGYASDLLVYIASPNFPLSEPYIHLPVDTFTCIAQVSASPKFVSSIVHLTIQDRNPRV
SPGSCVGIAAPASALGGHSHPERRGCRELGDAPLLPRLRCCPGGRPPCVSAGRHLARAGR
QLVEEYLLCVQTASCVIQEA

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_4|423_bp
atgtacaacggatatgccagtgacctcctagtctatattgccagtccaaacttccctctc
tcagaaccttacatccatcttcctgttgacaccttcacttgcatagcacaggtatcagct
agcccaaaatttgtctcatccatcgtccacctgactatccaagacagaaatcccagagtc
agcccaggcagctgcgtgggcatagccgcgcccgccagcgccctcggtgggcacagccac
ccggagcggcgcgggtgccgggagctgggcgacgcgcccctcctgccccggctgcgctgt
tgcccgggcggccgacctccgtgcgtgagcgccggcaggcaccttgcgcgcgcggggagg
cagctggtggaggagtacctgctgtgcgtccagacagccagctgtgtgatccaggaagca
tag

>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_5|103_aa
MTPVFGGLGAVGTLEGEAGKKEEEEEEEEEEKERRGRRKKRKEKKEKEKKEKRKRKERKR
KKRKRKKRKRKKKRKRKRKKEEEEEEEEEEEEEEEEEEEEESV

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_5|312_bp
atgacacctgtcttcgggggcctgggggctgtgggcacccttgaaggggaagcaggaaaa
aaagaagaagaggaggaagaagaagaagaggaaaaagaaagaagaggaagaagaaagaag
aggaaggagaagaaggagaaggagaagaaggagaagaggaagaggaaggagaggaagagg
aagaagaggaagaggaagaagaggaagaggaagaagaagaggaagaggaagaggaagaaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gagtcagtttaa

>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_6|641_aa
MVLPQGDLDVLFSNIDDIIKVNSRFLHDLQETASKEEEQVQLVGNIFLEFQEELEQVYKV
YCASYDQALLLVDTYRKEPELQRHIQGIVEAVVPQAGSSGLSFLLVIPLQRITRYPLLLQ
KILENTVPDASAYPVLQRAVSALQDVNTNINEYKMRKEVASKYTKVEQLTLRERLARINT
HTLSKKTTRLSQLLKQEAGLIPRTEDKEFDDLEERFQWVSLCVTELKNNVAAYLDNLQAF
LYFRPHEYNLDIPEGPAVQYCNLARDLHLEAFLKFKQRLEGLVWQPLCSLAKALLGPQNL
IKKRLDKLLDFERVEEKLLEVGSVTYQEEAARHTYQALNSLLVAELPQFNQLVMQWLGQI
MCTFVTLQRDLAKQVLQRAEGSMAQLPHHHVPEPAFRKLVEDALGRTSNQLRSFQETFEK
VQPPPTTQPLLPGSERQVQALLSRYGPGKLYQVTSNISGTGTLDLTLPRGQIVAILQNKD
TKGNSGRWLVDTGGHRGYVPAGKLQLYHVVPSAEELRRQAGLNKDPRCLTPEPSPALVPS
IPTMNQVIAAYPFVARSSHEVSLQAGQPVTILEAQDKKGNPEWSLVEVNGQRGSWPELLG
DTERNQTDEARSSRSQSLRQADEAPINYVPCNCMLLEAENF

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_6|1926_bp
atggtgttgccgcagggagatctggatgtcctgttctcaaacattgatgatatcatcaaa
gtgaacagcagattcctccatgatctgcaggagacagcctccaaggaagaggaacaagtg
cagctagttggtaacatatttctggaattccaagaggagttggagcaagtctataaggtc
tactgtgccagctacgaccaggccttgctactggtggacacgtaccggaaggagccggag
ctgcagcggcacatccagggcatcgttgaggcggtggtgccgcaagctggatcttcaggc
ctcagtttcttgctggtaattcctctgcagaggatcaccaggtacccactgctgctgcag
aaaatcctggagaacacagtccctgatgccagtgcctatcctgtccttcagagggctgtc
tctgccctccaggacgtgaacaccaatatcaatgagtacaagatgcgcaaggaagtggcc
tccaagtacaccaaggtagagcagctgaccctccgggagcggctggcccgcatcaacaca
cacaccctctccaagaagaccacccggctgagccagctgctgaagcaggaggcggggctg
atccccaggacagaagacaaggaatttgatgatttagaagagaggttccagtgggtgtct
ctgtgtgtgactgagctgaagaacaacgtggctgcttacctggacaatctgcaggctttc
ctctacttcaggccgcacgaatacaatctggacatccccgaggggcctgcagtgcagtat
tgcaatttggcaagagaccttcaccttgaggccttcctgaaatttaagcaacggctagaa
ggcctggtgtggcagccactgtgcagcctggccaaagccctgcttggccctcagaacctg
atcaagaagcgtctggacaagctactggactttgagcgggtggaagagaagctgctggag
gtgggcagtgtgacctaccaggaggaggccgcccggcacacataccaggcactcaactcg
ctgctagtggctgagctcccacagtttaaccagctggtcatgcagtggctgggccagatc
atgtgcacattcgtgaccctccagagggaccttgcaaagcaagtgctgcagagggcagag
ggaagcatggcccagctgccccaccaccacgtcccagagcctgccttcaggaagctggtg
gaggacgcactgggccggacgagtaaccagcttcgctcctttcaagagacctttgagaaa
gtgcagccacctcccaccacacaaccgctccttccagggtctgaacgccaggtgcaggct
ctcctgagcaggtatggccctgggaagctgtaccaggtgacaagcaacatcagtgggact
gggactctggacctgactctgcctcggggccaaatcgtggccatccttcaaaacaaggac
accaaaggcaacagcggccgctggctggtggacaccgggggacatcgtgggtatgtgccg
gctgggaaactacagctgtaccatgtggtccccagtgcagaggagctcagaaggcaggcg
gggctgaacaaagacccccgatgtctaacaccggagcccagcccagctctagtgccctct
attcccaccatgaaccaggtcatagccgcgtacccttttgtggccagaagcagccatgaa
gtgagcctgcaggcaggccagcctgtgaccatcctggaggcccaggacaagaaggggaac
cctgagtggagcctggtggaagtgaatggacagagggggagctggcctgagctgctgggg
gatacagaaagaaatcagacagatgaggcccggtcttccagatcccagtctctaaggcag
gcagatgaggcacccatcaattacgtgccgtgcaactgcatgctccttgaggctgagaac
ttctga

>gi568815593r:149405482_149650964|GENSCAN_predicted_peptide_7|193_aa
XLIINHQGSLSTGFMPDPVLGVRDEQKIMKMSSAKVSRDVSCVHIPTTPSAGLFPGLPTR
RKVRKVRRQRDEATCLKAATQLLLLKPPADSWAPKLLRPLETPKRMLLAAKRPEPITTGT
APSVSSVPAYCLVTCPACPCADAVDARTPYSWREAGKPSGACAYEHCPSLAAPGMGEEGK
PQECLWGVTAAPE

>gi568815593r:149405482_149650964|GENSCAN_predicted_CDS_7|582_bp
nntctcatcatcaaccatcaaggtagcctaagcactggctttatgccagatcctgtgctg
ggtgtcagagatgaacagaagatcatgaaaatgtctagtgccaaagtctcccgtgatgta
tcctgtgtccacatcccaacaaccccatcggcaggactctttcctggtttgcccacaagg
aggaaagtgaggaaagtgaggcgtcagagagatgaagcaacttgtttgaaggcggccaca
cagctgcttctactgaagcctccagcagactcttgggccccaaagctgctgcgtccccta
gaaacacctaaaaggatgctcctggctgcaaagcgccctgagcctataaccacaggaact
gctccatcagtatccagtgtgcctgcttattgcctggttacctgcccggcttgtccttgt
gcagatgcagtggatgccagaacaccctacagctggagagaggcggggaaaccctcaggt
gcttgtgcctacgagcactgccccagcctggcagcaccagggatgggagaggaaggaaag
ccccaggaatgcctgtggggtgtgacagcagcccctgagtga