GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:36:26

Sequence gi568815597r:150712024_150958461 : 246438 bp : 42.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.35 PlyA -     70     65    6                               1.05
 1.34 Term -  11667  11424  244  2  1   27   49   126 0.000  -3.01
 1.33 Intr -  35856  35754  103  1  1   78   90   117 0.873   9.21
 1.32 Intr -  38148  37983  166  0  1  103   43   170 0.978  12.61
 1.31 Intr -  39985  39758  228  1  0   85   74   290 0.994  24.44
 1.30 Intr -  43127  42978  150  2  0   87   89   128 0.991  12.24
 1.29 Intr -  45957  45835  123  0  0   82   78    57 0.915   3.96
 1.28 Intr -  52741  52615  127  0  1   80   71    48 0.441   2.06
 1.27 Intr -  87250  87145  106  2  1   52   95    84 0.926   3.85
 1.26 Intr -  87686  87521  166  2  1   88  116   165 0.992  17.91
 1.25 Intr -  92216  91998  219  2  0   71   94   271 0.985  23.58
 1.24 Intr -  93993  93838  156  0  0  107   78   154 0.957  15.59
 1.23 Intr -  96302  96246   57  2  0   62   54    79 0.100   0.06
 1.22 Intr - 101315 101149  167  0  2   76  110   199 0.996  19.66
 1.21 Intr - 102213 102054  160  0  1   89   97   146 0.738  14.24
 1.20 Intr - 104383 104236  148  0  1   95   98   150 0.999  16.02
 1.19 Intr - 104867 104765  103  0  1  114   99   -15 0.998   0.51
 1.18 Intr - 105179 105059  121  2  1  106   79   103 0.999  10.35
 1.17 Intr - 105410 105338   73  1  1   26  109    73 0.993   1.69
 1.16 Intr - 106007 105897  111  1  0   96   98    97 0.999  10.08
 1.15 Intr - 111322 111171  152  1  2   53   47   106 0.813   1.04
 1.14 Intr - 114594 114520   75  0  0   91   93    34 0.885   2.99
 1.13 Intr - 117204 117070  135  0  0  109   94   114 0.731  13.94
 1.12 Intr - 119091 119078   14  1  2   44  110     9 0.416  -7.72
 1.11 Intr - 119880 119795   86  2  2   81  110    43 0.677   4.34
 1.10 Intr - 120376 120311   66  0  0   92   94    24 0.434   0.50
 1.09 Intr - 122617 122515  103  2  1   79  105    50 0.830   4.11
 1.08 Intr - 124470 124257  214  0  1  110   94   169 0.807  17.07
 1.07 Intr - 127631 127418  214  1  1  101   20   218 0.790  14.10
 1.06 Intr - 130445 130401   45  1  0   69   91    87 0.927   3.71
 1.05 Intr - 130869 130702  168  2  0   60   89    46 0.502   0.04
 1.04 Intr - 134284 134240   45  0  0  118   90    82 0.995   8.01
 1.03 Intr - 140783 140739   45  1  0   74   94    42 0.499   0.01
 1.02 Intr - 146437 146326  112  2  1   85   96   181 0.256  17.12
 1.01 Init - 164544 164520   25  0  1  117   93    35 0.059   6.66
 1.00 Prom - 170257 170218   40                              -3.35

 2.00 Prom + 173422 173461   40                              -5.75
 2.01 Sngl + 191873 192190  318  1  0   48   38   339 0.974  20.62
 2.02 PlyA + 199809 199814    6                               1.05

 3.00 Prom + 210040 210079   40                              -5.35
 3.01 Init + 215692 215951  260  0  2   51   94   362 0.305  29.76
 3.02 Intr + 217944 218095  152  0  2   64  110   179 0.975  16.59
 3.03 Intr + 227917 227951   35  2  2  121  115    -9 0.980   2.12
 3.04 Intr + 229306 229405  100  0  1   95   72   149 0.997  12.76
 3.05 Intr + 230540 230665  126  0  0   68   76   134 0.999   9.93
 3.06 Intr + 230829 231030  202  1  1   77   82   207 0.990  16.42
 3.07 Intr + 231897 231970   74  0  2  109   94    80 0.999   8.83
 3.08 Intr + 232895 233118  224  0  2   77   73   139 0.433   8.22
 3.09 Intr + 234863 234989  127  1  1  105   71   129 0.999  12.23
 3.10 Intr + 237099 237255  157  1  1  109   61   102 0.994   7.75
 3.11 Intr + 237344 237502  159  2  0   85   66   174 0.606  13.08
 3.12 Intr + 238435 239067  633  1  0   97   89   489 0.347  40.22
 3.13 Intr + 239342 239458  117  2  0   81  110    64 0.400   6.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 164586 164747  162  2  0   72   39   175 0.851   7.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:150712024_150958461|GENSCAN_predicted_peptide_1|1408_aa
MAATTANPEMTSDVPSLGPAIASGNSGPGIQGGGAIVQRAIKRRPGLDFDDDGEGNSKFL
RCDDDQMSNDKERFARLGAVHENGIPEFPWLVLVQTLYIFGPYRDRLAKCFLCLDHVNLL
YIGFAFMLTFILSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALAR
KPDKLTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCETG
RVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV
KKEGQQSSMRMCMGSRRSFICRMRCGSSSVDPVSVNRLSFVRNRCRNGLGSVKDGEPHFV
VVHCTGYIKAWPPAVASPRVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVG
YQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNQEWLWMRTSSFT
FQNPYSDEIEYIICTNTNVKNSSQEPRPTLSNTIQRPQLGPTANLPLEMGSGQLAPRQQQ
QQTELDMVPGRDGLASYNHSQVVQPVTTTGPEHSKPLEKSDGLFAQDRDPRFSEIYHNIN
ADQSKGISSSTVPATQQLFSQGNTFPPTPRPAENFRNSGLAPPVTIVQPSASAGQMLAQI
SRHSNPTQGATPTWTPTTRSGFSAQVATQATAKTRTSQFGVGSFQTPSSFSSMSLPGAPT
ASPGAAAYPSLTNRGSNFAPETGQTAGQFQTRTAEGVGVWPQWQGQQPHHRSSSSEQHVQ
QPPAQQPGQPEVFQPITGADFRNPDGINLAPLMTSEEVVQKMTGLKVPLSHSRSNDTLYI
PEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLV
DCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIP
EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKG
NKHWIIKNRMKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLI
WEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNP
NRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS
TEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELP
YGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGK
EYWLVKNRALMEVNMEINVVFVSANKKTILQPMDQEVILTFKPYKLRNTFCKGCSCHSDS
SDGCRQRKLKTFWKGVTILDAIKNICDS

>gi568815597r:150712024_150958461|GENSCAN_predicted_CDS_1|4227_bp
atggcggcgactactgccaaccccgaaatgacatcagatgtaccatcactgggtccagcc
attgcctctggaaactctggacctggaattcaaggtggaggagccattgtccagagggct
attaagcggcgaccagggctggattttgatgatgatggagaagggaacagtaaatttttg
aggtgtgatgatgatcagatgtctaacgataaggagcggtttgccagattgggagcagtg
catgaaaatggtattcctgaattcccttggttggttcttgttcagactctgtatatcttt
ggtccctacagagatcgattggcaaaatgctttctgtgtttagatcatgttaatttacta
tatattggctttgcttttatgttgacctttatcttgtcggatgatgagcagagctctgcg
gataaagagagacttgccagggaaaatcacagtgaaattgaacggcggcgacggaacaag
atgacagcctacatcacagaactgtcagatatggtacccacctgtagtgccctggctcga
aaaccagacaagctaaccatcttacgcatggcagtttctcacatgaagtccttgcgggga
actggcaacacatccactgatggctcctataagccgtctttcctcactgatcaggaactg
aaacatttgatcttggaggcagcagatggctttctgtttattgtctcatgtgagacaggc
agggtggtgtatgtgtctgactccgtgactcctgttttgaaccagccacagtctgaatgg
tttggcagcacactctatgatcaggtgcacccagatgatgtggataaacttcgtgagcag
ctttccacttcagaaaatgccctgacagggcgtatcctggatctaaagactggaacagtg
aaaaaggaaggtcagcagtcttccatgagaatgtgtatgggctcaaggagatcgtttatt
tgccgaatgaggtgtggcagtagctctgtggacccagtttctgtgaataggctgagcttt
gtgaggaacagatgcaggaatggacttggctctgtaaaggatggggaacctcacttcgtg
gtggtccactgcacaggctacatcaaggcctggcccccagcagtggcatcacctagggta
actagttctcccaactgtacagacatgagtaatgtttgtcaaccaacagagttcatctcc
cgacacaacattgagggtatcttcacttttgtggatcaccgctgtgtggctactgttggc
taccagccacaggaactcttaggaaagaatattgtagaattctgtcatcctgaagaccag
cagcttctaagagacagcttccaacaggtagtgaaattaaaaggccaagtgctgtctgtc
atgttccggttccggtctaagaaccaagaatggctctggatgagaaccagctcctttact
ttccagaacccttactcagatgaaattgagtacatcatctgtaccaacaccaatgtgaag
aactctagccaagaaccacggcctacactctccaacacaatccagaggccacaactaggt
cccacagctaatttacccctggagatgggctcaggacagctggcacccaggcagcagcaa
cagcaaacagaattggacatggtaccaggaagagatggactggccagctacaatcattcc
caggtggttcagcctgtgacaaccacaggaccagaacacagcaagccccttgagaagtca
gatggtttatttgcccaggatagagatccaagattttcagaaatctatcacaacatcaat
gcggatcagagtaaaggcatctcctccagcactgtccctgccacccaacagctattctcc
cagggcaacacattccctcctaccccccggccggcagagaatttcaggaatagtggccta
gcccctcctgtaaccattgtccagccatcagcttctgcaggacagatgttggcccagatt
tcccgccactccaaccccacccaaggagcaaccccaacttggacccctactacccgctca
ggcttttctgcccaggtggctacccaggctactgctaagactcgtacttcccagtttggt
gtgggcagctttcagactccatcctccttcagctccatgtccctccctggtgccccaact
gcatcgcctggtgctgctgcctaccctagtctcaccaatcgtggatctaactttgctcct
gagactggacagactgcaggacaattccagacacggacagcagagggtgtgggtgtctgg
ccacagtggcagggccagcagcctcatcatcgttcaagttctagtgagcaacatgttcaa
caaccgccagcacagcaacctggccagcctgaggtcttccagccgatcactggagctgac
ttccgcaatcccgatggaataaatctagcacccctgatgaccagtgaagaggtggttcag
aagatgactggactcaaagtacccctgtctcattcccgcagtaatgacaccctttatatc
ccagaatgggaaggtagagccccagactctgtcgactatcgaaagaaaggatatgttact
cctgtcaaaaatcagggtcagtgtggttcctgttgggcttttagctctgtgggtgccctg
gagggccaactcaagaagaaaactggcaaactcttaaatctgagtccccagaacctagtg
gattgtgtgtctgagaatgatggctgtggagggggctacatgaccaatgccttccaatat
gtgcagaagaaccggggtattgactctgaagatgcctacccatatgtgggacaggaagag
agttgtatgtacaacccaacaggcaaggcagctaaatgcagagggtacagagagatcccc
gaggggaatgagaaagccctgaagagggcagtggcccgagtgggacctgtctctgtggcc
attgatgcaagcctgacctccttccagttttacagcaaaggtgtgtattatgatgaaagc
tgcaatagcgataatctgaaccatgcagttttggcagtgggatatggaatccagaaggga
aacaagcactggataattaaaaacagaatgaaacggctggtttgtgtgctcttggtgtgc
tcctctgcagtggcacagttgcataaagatcctaccctggatcaccactggcatctctgg
aagaaaacctatggcaaacaatacaaggaaaagaatgaagaagcagtacgacgtctcatc
tgggaaaagaatctaaagtttgtgatgcttcacaacctggagcattcaatgggaatgcac
tcatacgatctgggcatgaaccacctgggagacatgaccagtgaagaagtgatgtctttg
atgagttccctgagagttcccagccagtggcagagaaatatcacatataagtcaaaccct
aatcggatattgcctgattctgtggactggagagagaaagggtgtgttactgaagtgaaa
tatcaaggttcttgtggtgcttgctgggctttcagtgctgtgggggccctggaagcacag
ctgaagctgaaaacaggaaagctggtgtctctcagtgcccagaacctggtggattgctca
actgaaaaatatggaaacaaaggctgcaatggtggcttcatgacaacggctttccagtac
atcattgataacaagggcatcgactcagacgcttcctatccctacaaagccatggatcag
aaatgtcaatatgactcaaaatatcgtgctgccacatgttcaaagtacactgaacttcct
tatggcagagaagatgtcctgaaagaagctgtggccaataaaggcccagtgtctgttggt
gtagatgcgcgtcatccttctttcttcctctacagaagtggtgtctactatgaaccatcc
tgtactcagaatgtgaatcatggtgtacttgtggttggctatggtgatcttaatgggaaa
gaatactggcttgtgaaaaacagagctctaatggaggtgaacatggagattaatgttgtt
ttcgtgtctgctaacaaaaagaccattctgcagcccatggatcaagaagtaattttgact
ttcaagccttataagttaagaaacacattttgtaagggctgtagctgccatagtgattcc
tctgatggatgtaggcaaagaaaattgaaaaccttctggaaaggcgtcactattctcgat
gccattaagaatatttgtgattcatag

>gi568815597r:150712024_150958461|GENSCAN_predicted_peptide_2|105_aa
MGDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFSQKTGQAVGFSYTDANKNKGIIW
GEDTLMEYLENPKKYIPGTKMIFAGIKKKAEKADLTAYLKKATNE

>gi568815597r:150712024_150958461|GENSCAN_predicted_CDS_2|318_bp
atgggtgatgttgagaaaggcaagaagatttttgttcagaagtgtgcccagtgtcacacc
gtggaaaagggaggcaagcacaagactgggcctaatctccatggtctcttcagtcagaag
acaggtcaggctgttggattctcttacacagatgccaataagaacaaaggcatcatctgg
ggagaggatacgctgatggagtatttggaaaatcccaagaagtacatccctggaacaaaa
atgatctttgccggcattaaaaagaaggcagaaaaggccgacttgacagcttatctcaaa
aaagctactaatgagtaa

>gi568815597r:150712024_150958461|GENSCAN_predicted_peptide_3|789_aa
MSSLPGCIGLDAATATVESEEIAELQQAVVEELGISMEELRHFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDESSRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLVLFFSTILEAEDDKRCEWIYRGSTRLEPMFSMKTSSASAL
EKKQGQLRTRPNMGAVRSKGPVVQYTQDLTGTGTQFKPVEPPQPTAPPAPPFPPAPPLSP
QAGDSESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVSGGKPGINQTYRS
PLGSTASAPAPSALPAPPAPPVFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRP
MRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFET
GCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYS
KERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYK
RLEECLPTG

>gi568815597r:150712024_150958461|GENSCAN_predicted_CDS_3|2367_bp
atgtcttcccttcctgggtgcattggtttggatgcagcaacagctacagtggagtctgaa
gagattgcagagctgcaacaggcagtggttgaggaactgggtatctctatggaggaactt
cggcatttcatcgatgaggaactggagaagatggattgtgtacagcaacgcaagaagcag
ctagcagagttagagacatgggtaatacagaaagaatctgaggtggctcacgttgaccaa
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacaataccgggacagtagctctgaggacgaatcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgttcagaagttcatggatgctgtcaacaagaagagcagttcccaggatctg
cataaaggaaccttgagtcagatgtctggagaactaagcaaagatggtgacctgatagtc
agcatgcgaattctgggcaagaagagaactaagacttggcacaaaggcacccttattgcc
atccagacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgggtggtcgccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtcggaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgtgacttcatagaggagtatgtcactgcctac
cccaaccgccccatggtactgctcaagagtggccagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gtactgttcttctctacaattttggaggcagaggatgacaaaagatgtgagtggatctat
cgaggctctacacggctggagcccatgttcagcatgaaaacatcctcagcctctgcactg
gagaagaagcaaggacagctcaggacacgtccaaatatgggtgctgtgaggagcaaaggc
cctgttgtccagtacacacaggatctgaccggtactggaacccagttcaagccagtggaa
cccccacagcctacagctccacctgccccacctttcccacctgctccacctctatccccc
caagcaggtgacagtgaaagcttggaaagccagcttgcccagtcacggaagcaggtagcc
aaaaagagcacgtcctttcgaccaggatctgtgggctctggtcattcctcccctacatct
cctgcactcagtgaaaatgtctctggtgggaaacctgggatcaaccagacatatagatca
cctttaggctccacagcctctgccccagcaccctcagcactcccggcccctccagcaccc
ccagtcttccatggcatgctggagcgggccccagcagagccctcctaccgtgctcccatg
gagaagcttttctacttacctcatgtctgcagctatacctgtctgtctcgagtcagacct
atgaggaatgagcagtaccggggcaagaaccctctgctggtcccgttactatatgacttc
cggcggatgacagcccggcgtcgagttaaccgcaagatgggctttcatgttatctataag
acaccttgtggtctctgccttcggacaatgcaggagatagaacgctaccttttcgagact
ggctgtgacttcctcttcctggagatgttctgtttggatccatatgttcttgtggaccga
aagtttcagccctataagcctttttactatattttggacatcacttatgggaaggaagat
gttcccctatcctgtgtcaatgagattgacacaacccctccaccccaggtggcctacagc
aaggaacgtatcccgggcaagggtgttttcattaacacaggccctgaatttctggttggc
tgtgactgcaaggatgggtgtcgggacaagtccaagtgtgcctgccatcaactaactatc
caggctacagcctgtaccccaggaggccaaatcaaccctaactctggctaccagtacaag
agactagaagagtgtctacccacaggn