GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:31:18

Sequence gi568815578f:47522248_47753072 : 230825 bp : 44.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5077   5116   40                              -3.06
 1.01 Sngl +  32339  32896  558  1  0   60   42   247 0.981  13.43
 1.02 PlyA +  34795  34800    6                               1.05

 2.04 PlyA -  35064  35059    6                               1.05
 2.03 Term -  50720  50704   17  0  2  119   53     6 0.709  -1.40
 2.02 Intr -  51361  51316   46  1  1   93  111     8 0.728   1.58
 2.01 Init -  57390  57334   57  0  0   60   95    26 0.565   1.81
 2.00 Prom -  71660  71621   40                              -1.56

 3.00 Prom +  85056  85095   40                              -4.46
 3.01 Init + 100001 100083   83  1  2   64   73    72 0.987   3.74
 3.02 Intr + 101664 101836  173  0  2   85   85    98 0.568   8.79
 3.03 Intr + 103134 103238  105  1  0  115   14    73 0.243   2.79
 3.04 Intr + 105314 105502  189  0  0   48  116    33 0.356   1.66
 3.05 Intr + 111249 111389  141  1  0  100   98    20 0.933   4.52
 3.06 Intr + 113644 113733   90  2  0   77   70    62 0.797   3.27
 3.07 Intr + 113773 113931  159  2  0   91   78    50 0.647   4.26
 3.08 Intr + 114067 114515  449  2  2   90   76   254 0.717  17.47
 3.09 Intr + 115401 115536  136  2  1   69   86    31 0.949   1.14
 3.10 Intr + 117678 117804  127  1  1   97   47    45 0.964   1.04
 3.11 Intr + 119978 120137  160  2  1   46   96   184 0.961  14.99
 3.12 Intr + 124826 125119  294  1  0   79   91    90 0.882   5.61
 3.13 Intr + 126758 126850   93  1  0   64   99    42 0.476   3.06
 3.14 Intr + 128738 129029  292  1  1   45   54   377 0.735  26.71
 3.15 Intr + 130159 130333  175  2  1   47  103    70 0.935   3.40
 3.16 Intr + 130684 130825  142  1  1   71   80    77 0.912   5.56
 3.17 Term + 132671 132703   33  1  0  109   41    21 0.606  -2.91
 3.18 PlyA + 133535 133540    6                               1.05

 4.29 PlyA - 133629 133624    6                               1.05
 4.28 Term - 134196 134165   32  1  2   87   48    17 0.216  -4.38
 4.27 Intr - 135130 135005  126  2  0   42  111    29 0.387   1.25
 4.26 Intr - 138787 138617  171  2  0   35   99    98 0.525   5.51
 4.25 Intr - 139649 139526  124  2  1   68   92   168 0.978  15.36
 4.24 Intr - 140965 140823  143  2  2   90   92   176 0.982  18.27
 4.23 Intr - 141375 141206  170  2  2   83   68   351 0.990  32.19
 4.22 Intr - 143046 142952   95  0  2   90   94    82 0.978   7.76
 4.21 Intr - 143706 143610   97  2  1   66  105   247 0.547  24.21
 4.20 Intr - 144241 144013  229  2  1  111  109   332 0.998  34.53
 4.19 Intr - 150146 149951  196  2  1   44   89   328 0.993  27.49
 4.18 Intr - 154376 154247  130  1  1   93  110   219 0.994  25.30
 4.17 Intr - 156557 156429  129  1  0  114   85   298 0.999  31.91
 4.16 Intr - 160922 160747  176  2  2  103   84   339 0.998  33.74
 4.15 Intr - 162334 162184  151  0  1   75   78   364 0.725  34.26
 4.14 Intr - 168048 167879  170  0  2  117   77   206 0.853  21.14
 4.13 Intr - 178306 178241   66  1  0   79   94    27 0.729   1.50
 4.12 Intr - 180423 180272  152  1  2  105  121   219 0.958  26.78
 4.11 Intr - 184132 184014  119  0  2   88   59     9 0.513  -1.89
 4.10 Intr - 186289 186213   77  1  2  103   68    58 0.802   3.61
 4.09 Intr - 187391 187256  136  1  1   16   82    80 0.488   0.77
 4.08 Intr - 193301 193153  149  2  2   97   38    73 0.131   2.23
 4.07 Intr - 199643 199553   91  1  1   42   75    88 0.524   2.90
 4.06 Intr - 201779 201652  128  2  2  108   60    60 0.467   4.68
 4.05 Intr - 204745 204614  132  1  0   89   59    59 0.345   3.94
 4.04 Intr - 213592 213498   95  2  2   45   93    30 0.336  -1.12
 4.03 Intr - 214695 214456  240  1  0  110   99   468 0.959  47.62
 4.02 Intr - 225783 225666  118  0  1   10   90    93 0.501   1.74
 4.01 Intr - 227233 227129  105  1  0   78   58    64 0.592   2.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:47522248_47753072|GENSCAN_predicted_peptide_1|185_aa
MSELPFIIASKRIKYLGIQLTRDVKDLFKESYKPLLNEIKEDTNKWKNVPCSWVGRINIV
KKAILPKVIYRFNAIPIELPMTFFTELEKTTLKFIWNQKGAHIAKSILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMLHIYKYLIFDKADKNKQWGKDSLFT
LLKFQ

>gi568815578f:47522248_47753072|GENSCAN_predicted_CDS_1|558_bp
atgagtgaactcccattcataattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaagacctcttcaaggagagctacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacgttccatgctcgtgggtaggaagaatcaatatcgtg
aaaaaggccatactgcccaaggtaatttatagattcaatgccatccccatcgagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaagga
gcccacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagagccctcagaaataatgctgcatatctacaag
tatctgatctttgacaaagctgacaaaaacaagcaatggggaaaggattccctatttaca
ctcttgaaatttcaatga

>gi568815578f:47522248_47753072|GENSCAN_predicted_peptide_2|39_aa
MIGLPTRNLERSTTIYQDPILRFLQIEVCGSPASGLLIP

>gi568815578f:47522248_47753072|GENSCAN_predicted_CDS_2|120_bp
atgattggcttgcctaccaggaacctggaaaggagtactactatataccaggatcctata
ttgcgctttttacaaattgaggtttgtggcagccctgcttcaggcctccttattccctga

>gi568815578f:47522248_47753072|GENSCAN_predicted_peptide_3|946_aa
MSGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISANLSDID
NFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQA
INGVSWTNETQRQKSHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMME
EGEGKVVNIDTNSLRSSMRPGFEDIIRRCIQRFFSLNDGQSWSQKRHYQEGVHSPMASSG
NTGNHSFSSSSLSALQAISEGPKLDNSPNMNITQPSKVSNQDSKSPLGFYCDQNPVESSM
CQSNSRDHLSDKENSSCKESSVSVTSPSGVSSSTSGGVSSTSNMHGSLLQEKHRILHKLL
QNGNSPAEVAKITAEATGKDTSSITSCGDGNVVKQEQLSPKKKENNALLRYLLDRDDPSD
ALSKELQPQVEGVDNKMSQCTSSTIPSSSQEKDPKIKTETSEEGSGDLDNLDAILGDLTS
SDFYNNSISSNGSHLGTKQQVFQGTNSLGPGEIPMGMGANPYGQAAASNQLGSWPDGMLS
MEQVSHGTQNRNSLDDLVGPPSNLEGQSDERALLDQLHTLLSNTDATGLEEIDRALGIPE
LVNQGQALEPKQDAFQGQEAAVMMDQKAGLYGQTYPAQGPPMQGGFHLQGQSPSFNSMMN
QMNQQGNFPLQGMHPRANIMRPRTNTPKQLRMQLQQRLQGQQFLNQSRQALELKMENPTA
GGAAVMRPMMQPQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQTQAFSPPPNVTASPSMDGLLAGPTMPQAPPQQFPYQPNYGMGQQPDPAF
GRVSSPPNAMMSSRMGPSQNPMMQHPQAASIYQSSEMKGWPSGNLARNSSFSQQQFAHQG
NPAVYSMVHMNGSSGHMGQMNMNPMPMSGMPMGPDQERFQILVAKT

>gi568815578f:47522248_47753072|GENSCAN_predicted_CDS_3|2841_bp
atgagtggattaggagaaaacttggatccactggccagtgattcacgaaaacgcaaattg
ccatgtgatactccaggacaaggtcttacctgcagtggtgaaaaacggagacgggagcag
gaaagtaaatatattgaagaattggctgagctgatatctgccaatcttagtgatattgac
aatttcaatgtcaaaccagataaatgtgcgattttaaaggaaacagtaagacagatacgt
caaataaaagagcaaggaaaaactatttccaatgatgatgatgttcaaaaagccgatgta
tcttctacagggcagggagttattgataaagactccttaggaccgcttttacttcaggca
attaatggagtttcctggacaaatgagacccaaagacaaaaaagccatacatttaattgc
cgtatgttgatgaaaacaccacatgatattctggaagacataaacgccagtcctgaaatg
cgccagagatatgaaacaatgcagtgctttgccctgtctcagccacgagctatgatggag
gaaggggaaggaaaggttgtcaatatagatacaaattcactgagatcctccatgaggcct
ggctttgaagatataatccgaaggtgtattcagagattttttagtctaaatgatgggcag
tcatggtcccagaaacgtcactatcaagaaggtgtgcactctcccatggcatcttctggc
aatactgggaaccacagcttttccagcagctctctcagtgccctgcaagccatcagtgaa
ggccccaaattggataactctcccaatatgaatattacccaaccaagtaaagtaagcaat
caggattccaagagtcctctgggcttttattgcgaccaaaatccagtggagagttcaatg
tgtcagtcaaatagcagagatcacctcagtgacaaagaaaattcaagttgtaaagaatct
tctgttagtgtcaccagcccctctggagtctcctcctctacatctggaggagtatcctct
acatccaatatgcatgggtcactgttacaagagaagcaccggattttgcacaagttgctg
cagaatgggaattcaccagctgaggtagccaagattactgcagaagccactgggaaagac
accagcagtataacttcttgtggggacggaaatgttgtcaagcaggagcagctaagtcct
aagaagaaggagaataatgcacttcttagatacctgctggacagggatgatcctagtgat
gcactctctaaagaactacagccccaagtggaaggagtggataataaaatgagtcagtgc
accagctccaccattcctagctcaagtcaagagaaagaccctaaaattaagacagagaca
agtgaagagggatctggagacttggataatctagatgctattcttggtgatctgactagt
tctgacttttacaataattccatatcctcaaatggtagtcatctggggactaagcaacag
gtgtttcaaggaactaattctctggggcctggtgaaatccccatgggaatgggggctaat
ccctatggccaagcagcagcatctaaccaactgggttcctggcccgatggcatgttgtcc
atggaacaagtttctcatggcactcaaaataggaattccctggatgatcttgttgggcca
ccttccaacctggaaggccagagtgacgaaagagcattattggaccagctgcacactctt
ctcagcaacacagatgccacaggcctggaagaaattgacagagctttgggcattcctgaa
cttgtcaatcagggacaggcattagagcccaaacaggatgctttccaaggccaagaagca
gcagtaatgatggatcagaaggcaggattatatggacagacatacccagcacaggggcct
ccaatgcaaggaggctttcatcttcagggacaatcaccatcttttaactctatgatgaat
cagatgaaccagcaaggcaattttcctctccaaggaatgcacccacgagccaacatcatg
agaccccggacaaacacccccaagcaacttagaatgcagcttcagcagaggctgcagggc
cagcagtttttgaatcagagccgacaggcacttgaattgaaaatggaaaaccctactgct
ggtggtgctgcggtgatgaggcctatgatgcagccccagggttttcttaatgctcaaatg
gtcgcccaacgcagcagagagctgctaagtcatcacttccgacaacagagggtggctatg
atgatgcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcaacag
caacagcaacagcaacagcagcaacagcagcaaacccaggccttcagcccacctcctaat
gtgactgcttcccccagcatggatgggcttttggcaggacccacaatgccacaagctcct
ccgcaacagtttccatatcaaccaaattatggaatgggacaacaaccagatccagccttt
ggtcgagtgtctagtcctcccaatgcaatgatgtcgtcaagaatgggtccctcccagaat
cccatgatgcaacacccgcaggctgcatccatctatcagtcctcagaaatgaagggctgg
ccatcaggaaatttggccaggaacagctccttttcccagcagcagtttgcccaccagggg
aatcctgcagtgtatagtatggtgcacatgaatggcagcagtggtcacatgggacagatg
aacatgaaccccatgcccatgtctggcatgcctatgggtcctgatcaggagcgttttcag
attttggttgctaagacctga

>gi568815578f:47522248_47753072|GENSCAN_predicted_peptide_4|1248_aa
PLITRGEKTCGCRLSQEEERLIRTHTGVQLAKHIPVKRVAQGQERKQGDQVVFAAVQVGD
AGGTEQDGALQSERGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCPSRSSILTGKYVHNH
NTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTVLDLQPSRLGSFLSDTQCGLAGMLWC
GEQASKLWSWVGSSVAALKISSMRSLPFPTMVSLKESPPAVGVETAAGSKNFQGPFLPQA
LCMCSYLCLEHWPTTILVQATGFVEDSFSTDWGSQAKGDTLIVQANLMGLVQDSELERAS
SEHASHYEVFVGSVVYPFIPQTFIEVSSLTKLCSRCEDTGDKGLRKPLPSWGWADSLQLA
QLGSHAFASTNQFVHDHQGNAVLMGVKDLHTFLESTVKNVSKAVDLFPGKCTKGKIWHAM
FQERKGLVTSAVYCPPRRRYGRAWREARSVTEVEPPRMEGSVRAFFGKYLNEYNGSYVPP
GWKEWVGLLKNSRFYNYTLCRNGVKEKHGSDYSKGCFVGHVAVFHYGFTTKVFEDHDYLT
DLITNDSVSFFRTSKKMYPHRPVLMVISHAAPHGPEDSAPQYSRLFPNASQHITPSYNYA
PNPDKHWIMRYTGPMKPIHMEFTNMLQRKRLQTLMSVDDSMETIYNMLVETGELDNTYIV
YTADHGYHIGQFGLVKGKSMPYEFDIRVPFYVRGPNVEAGCLNPHIVLNIDLAPTILDIA
GLDIPADMDGKSILKLLDTERPVNRKLLHKRDNDKVDAQEENFLPKYQRVKDLCQRAEYQ
TACEQLGQKWQCVEDATGKLKLHKCKGPMRLGGSRALSNLVPKYYGQGSEACTCDSGDYK
LSLAGRRKKLFKKKYKASYVRSRSIRSVAIEVDGRVYHVGLGDAAQPRNLTKRHWPGAPE
DQDDKDGGDFSGTGGLPDYSAANPIKVTHRCYILENDTVQCDLDLYKSLQAWKDHKLHID
HEIETLQNKIKNLREVRGHLKKKRPEECDCHKIRKGLQEKDKVWLLREQKRKKKLRKLLK
RLQNNDTCSMPGLTCFTHDNQHWQTAPFWTLGPFCACTSANNNTYWCMRTINETHNFLFC
EFATGFLEYFDLNTDPYQLMNAVNTLDRDVLNQLHVQLMELRSCKGYKQCNPRTRNMDLG
GEWDFMGENSEDGPVIQGEMVVAWTRGGSSKDDGFQIQVVKPPDNMVMGGAGLGVPVFKI
LPVNIFLEENALGLEDFLKRGVDGCRLTKKSTILQGTTAAPTSGSKNF

>gi568815578f:47522248_47753072|GENSCAN_predicted_CDS_4|3747_bp
ccgctgatcactagaggagaaaaaacatgtggatgcaggttatctcaggaagaagagagg
ctcattcggacccacactggtgttcagcttgccaagcacattcctgtgaagagggtggcc
cagggacaagagcggaagcagggagatcaggtggtgtttgcagcagtccaggtgggagat
gctggtggtacggagcaggacggggcactgcagagcgagagaggttccatgcaggtgatg
aacaagacccggcgcatcatggagcagggcggggcgcacttcatcaacgccttcgtgacc
acacccatgtgctgcccctcacgctcctccatcctcactggcaagtacgtccacaaccac
aacacctacaccaacaatgagaactgctcctcgccctcctggcaggcacagcacgagagc
cgcacctttgccgtgtacctcaatagcactggctaccggacagtgctggacctgcagccc
tcgaggctgggcagcttcctctcagatacacagtgtgggctggcagggatgctttggtgt
ggggagcaagccagtaagctgtggtcctgggtggggagcagtgtggccgccctgaagatc
agctccatgcgtagccttcccttcccaaccatggtttctctcaaggaatctccacctgca
gtgggcgttgaaacagctgcagggtcaaaaaacttccaaggtccattcctgccccaggcc
ctttgtatgtgcagttacctctgtctggagcactggcccacaaccattctggtacaagca
accggtttcgtggaagacagtttttccacggactggggcagccaggcaaaaggagatacc
ctgattgtccaggccaacctcatgggcctggtccaggattcagagctagaaagagcctca
tcagaacatgcctcccattacgaggtgttcgttggttcagttgtttacccatttattcca
caaacgttcatcgaggtctcgtcactgaccaagctctgttctagatgtgaggacacaggg
gacaagggactcagaaagccgctgccctcatggggctgggctgactcgctgcagttggcc
cagcttgggtcacatgcctttgcctcaactaaccagtttgtgcatgatcaccaggggaat
gcggtcctcatgggagtcaaggatttgcacacattcctggagtcaacagtcaagaatgtg
tcaaaagctgtggacttgtttccaggaaaatgcacaaaaggcaaaatctggcatgcaatg
ttccaggagcggaaaggtttggtgacctctgctgtatattgtccccctcggaggaggtac
gggagagcatggagagaggccaggagtgttacagaagtggagcccccccgcatggagggc
agcgttagagctttcttcgggaagtatcttaatgaatacaacggctcctacgtgccaccc
ggctggaaggagtgggtcggactccttaaaaactcccgcttttataactacacgctgtgt
cggaacggggtgaaagagaagcacggctccgactactccaagggctgctttgttgggcat
gtagcggtgtttcattatggttttaccacaaaggtttttgaggatcacgattacctcaca
gacctcatcaccaatgacagcgtgagcttcttccgcacgtccaagaagatgtacccgcac
aggccagtcctcatggtcatcagccatgcagccccccacggccctgaggattcagcccca
caatattcacgcctcttcccaaacgcatctcagcacatcacgccgagctacaactacgcg
cccaacccggacaaacactggatcatgcgctacacggggcccatgaagcccatccacatg
gaattcaccaacatgctccagcggaagcgcttgcagaccctcatgtcggtggacgactcc
atggagacgatttacaacatgctggttgagacgggcgagctggacaacacgtacatcgta
tacaccgccgaccacggttaccacatcggccagtttggcctggtgaaagggaaatccatg
ccatatgagtttgacatcagggtcccgttctacgtgaggggccccaacgtggaagccggc
tgtctgaatccccacatcgtcctcaacattgacctggcccccaccatcctggacattgca
ggcctggacatacctgcggatatggacgggaaatccatcctcaagctgctggacacggag
cggccggtgaatcgcaagctgctacacaagagagacaatgacaaggtggacgcccaggag
gagaactttctgcccaagtaccagcgtgtgaaggacctgtgtcagcgtgctgagtaccag
acggcgtgtgagcagctgggacagaagtggcagtgtgtggaggacgccacggggaagctg
aagctgcataagtgcaagggccccatgcggctgggcggcagcagagccctctccaacctc
gtgcccaagtactacgggcagggcagcgaggcctgcacctgtgacagcggggactacaag
ctcagcctggccggacgccggaaaaaactcttcaagaagaagtacaaggccagctatgtc
cgcagtcgctccatccgctcagtggccatcgaggtggacggcagggtgtaccacgtaggc
ctgggtgatgccgcccagccccgaaacctcaccaagcggcactggccaggggcccctgag
gaccaagatgacaaggatggtggggacttcagtggcactggaggccttcccgactactca
gccgccaaccccattaaagtgacacatcggtgctacatcctagagaacgacacagtccag
tgtgacctggacctgtacaagtccctgcaggcctggaaagaccacaagctgcacatcgac
cacgagattgaaaccctgcagaacaaaattaagaacctgagggaagtccgaggtcacctg
aagaaaaagcggccagaagaatgtgactgtcacaaaatcaggaagggcctgcaagagaag
gacaaggtgtggctgttgcgggagcagaagcgcaagaagaaactccgcaagctgctcaag
cgcctgcagaacaacgacacgtgcagcatgccaggcctcacgtgcttcacccacgacaac
cagcactggcagacggcgcctttctggacactggggcctttctgtgcctgcaccagcgcc
aacaataacacgtactggtgcatgaggaccatcaatgagactcacaatttcctcttctgt
gaatttgcaactggcttcctagagtactttgatctcaacacagacccctaccagctgatg
aatgcagtgaacacactggacagggatgtcctcaaccagctacacgtacagctcatggag
ctgaggagctgcaagggttacaagcagtgtaacccccggactcgaaacatggacctgggt
ggagaatgggactttatgggagaaaacagcgaagatggcccagttatccagggagaaatg
gtggtggcttggactagaggtgggagcagtaaagatgatggatttcagattcaggtggtg
aagcccccagacaacatggtgatgggaggtgcgggattaggagtcccagtattcaagata
ctaccagtcaacatctttttggaagaaaatgccttgggtttagaagattttcttaaaagg
ggagtagatggttgtagattgactaaaaagtctaccatacttcaagggactacagctgca
cccacctctggatcaaagaacttctag