GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:20:56

Sequence gi568815587r:113310730_113524651 : 213922 bp : 46.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5514   5586   73  2  1   81   84   106 0.808   8.48
 1.02 Intr +  12559  12722  164  2  2   92    4   189 0.713  10.59
 1.03 Intr +  13265  13286   22  1  1   47  110     4 0.647  -4.38
 1.04 Intr +  14795  14916  122  0  2   74   82   224 0.996  20.61
 1.05 Intr +  19191  19250   60  2  0   57  116    72 0.969   5.83
 1.06 Intr +  24237  24308   72  2  0   70  103    71 0.913   6.40
 1.07 Intr +  28045  28105   61  0  1   86  105    27 0.982   2.51
 1.08 Intr +  28557  28745  189  1  0  118   58   242 0.905  23.76
 1.09 Intr +  29935  30004   70  2  1   71   97    24 0.438  -0.16
 1.10 Intr +  31108  31196   89  1  2  108  115    26 0.527   6.91
 1.11 Intr +  33543  33711  169  1  1   71  115   161 0.526  16.10
 1.12 Intr +  39344  39436   93  2  0   75   86   112 0.984   8.78
 1.13 Intr +  41198  41258   61  2  1   68   97    46 0.988   2.24
 1.14 Intr +  41341  41478  138  0  0   74   84   112 0.960  10.06
 1.15 Intr +  49211  49279   69  1  0   83   98    17 0.737   1.58
 1.16 Intr +  51672  51773  102  2  0   83  116    56 0.990   8.27
 1.17 Intr +  53599  53731  133  0  1   42   49    65 0.606  -1.78
 1.18 Intr +  54106  54331  226  2  1  112   85   241 0.892  23.24
 1.19 Intr +  56336  56406   71  2  2   86   41    36 0.674  -2.47
 1.20 Intr +  57458  57529   72  0  0   76   75    47 0.561   1.58
 1.21 Intr +  57735  57919  185  1  2   67   81    85 0.337   5.21
 1.22 Intr +  62395  62448   54  0  0  104   78    33 0.234   3.08
 1.23 Term +  67439  67480   42  1  0  147   34    -1 0.037  -2.44
 1.24 PlyA +  70492  70497    6                               1.05

 2.00 Prom +  70679  70718   40                              -3.46
 2.01 Init +  77156  77340  185  1  2   88   84   339 0.990  32.09
 2.02 Intr +  82752  83046  295  0  1  106   78   434 0.999  41.21
 2.03 Intr +  84200  84351  152  1  2   90   94   219 0.997  21.66
 2.04 Intr +  84549  84679  131  0  2   28  115    30 0.626   0.04
 2.05 Intr +  86495  86613  119  0  2   17  105   148 0.953   9.58
 2.06 Intr +  87251  87287   37  1  1  104   89    71 0.999   6.64
 2.07 Term +  88235  89538 1304  0  2   71   42  1236 0.497 109.06
 2.08 PlyA +  92977  92982    6                               1.05

 3.16 PlyA -  98905  98900    6                               1.05
 3.15 Term - 100191  99998  194  1  2  100   41   404 0.999  34.48
 3.14 Intr - 102014 101827  188  1  2   89  109   272 0.768  28.73
 3.13 Intr - 103598 103324  275  2  2   71  107    48 0.619   1.34
 3.12 Intr - 103732 103646   87  1  0   85  103    51 0.942   6.47
 3.11 Intr - 104882 104692  191  0  2  123   14   397 0.951  35.10
 3.10 Intr - 106270 106134  137  0  2   96   88   264 0.998  27.41
 3.09 Intr - 107407 107298  110  1  2   99   99   186 0.982  19.88
 3.08 Intr - 109315 109191  125  2  2   43   58    96 0.624   2.40
 3.07 Intr - 113085 113055   31  0  1  119   80     7 0.648   0.70
 3.06 Intr - 113953 113638  316  0  1   99   92   597 0.796  57.27
 3.05 Intr - 122372 122278   95  2  2  122   52     1 0.469  -1.34
 3.04 Intr - 124459 124417   43  0  1   67  116    61 0.726   5.04
 3.03 Intr - 125476 125305  172  2  1   14   -8   182 0.168   0.20
 3.02 Intr - 129351 129181  171  1  0   17   92    80 0.075   1.21
 3.01 Init - 136503 136284  220  0  1   91   50   108 0.121   6.10
 3.00 Prom - 142550 142511   40                              -4.56

 4.06 PlyA - 142855 142850    6                               1.05
 4.05 Term - 153429 153325  105  0  0   86   49    63 0.028   0.61
 4.04 Intr - 164531 164347  185  0  2   29  121   125 0.732   9.41
 4.03 Intr - 164798 164780   19  2  1   71   77    31 0.115  -3.52
 4.02 Intr - 180461 180294  168  2  0   89  107    59 0.287   8.04
 4.01 Intr - 207030 206935   96  0  0   56   84    63 0.235   2.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 141283 141421  139  0  1   96   69    71 0.846   6.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:113310730_113524651|GENSCAN_predicted_peptide_1|778_aa
GFRFTMDADKEKDLQKFLKNVDEISNLIQEMNSDDPVVQQKAVLETEKRLLLMEEDQEED
ECRTTLNKTMISPPQTAMKSAEEINSALKEKGNEAFAEGNYETAILRYSEGLEKLKDMKV
LYTNRAQAYMKLEDYEKALVDCEWALKCDEKCTKAYFHMGKANLALKNYSVSRECYKKIL
EINPKLQTQVKGYLNQVDLQEKADLQEKEAHELLDSGKNTAVTTKNLLETLSKPDQIPLF
YAGGIEILTEMINECTEQTLFRMHNGFSIISDNEVIRRCFSTAGNDAVEEMVCVSVLKLW
QAVCSRNEENQRVLVIHHDRARLLAALLSSKVLAIRQQSFALLLHLAQTESGRSLIINHL
DLTRLLEALVSFLDFSDKEANTAMGLFTDLALEESETPGMPLCDMKLSGWFVGLLKTDPK
VSSSSALCQCIAIMGNLSAEPTTRRHMAACEEFGDGCLSLLVWAVEVSRRCLSLLNSQDG
GILTRAAGVLSRTLSSSLKIVEEALRAGVVKKMMKFLKQASQERQPANVLLTNSLECTEG
ELKEAPPWKRQAFLLDPVAYPAELSVMMKLLSSEDEVLVGNAALCLGNCMEVPNVASSLL
KTDLLQVLLKLAGSDTQKTAVQVNAGIALGKLCTAEPRGNAPFQLPQGHSKPGSPVDCKS
LKCLPRAVISNLEESLLHLKLCLLAGNQSLLVQQAEELGFSILKRMWPGWNSITILKPQQ
RWQVTDSPELLTVFIHDVRTVVPVRRKMRKLRCKAVKQLVQDLDQVEGEQGVSLNFHS

>gi568815587r:113310730_113524651|GENSCAN_predicted_CDS_1|2337_bp
ggattccggttcacaatggatgctgataaagagaaagatttgcagaaatttcttaaaaat
gtggatgaaatctccaatttaattcaggagatgaattctgatgacccagttgtgcaacag
aaagctgtcctggagacagaaaagagactactgcttatggaggaagaccaggaggaggat
gaatgcaggaccaccttgaacaagactatgatcagtcctccacaaactgctatgaagagt
gcagaagaaataaactcagccctaaaagaaaaagggaatgaagcatttgctgaaggcaat
tatgaaacagctatcctgcgctacagtgagggtttggagaagctgaaggacatgaaagtg
ctgtacaccaaccgagcccaggcttatatgaaacttgaggactatgagaaggcactggtg
gattgtgagtgggctctcaagtgtgatgaaaaatgcacaaaagcatattttcacatggga
aaagccaacctggccctgaagaactacagtgtgtctagagagtgttataagaagatctta
gaaataaaccccaagctgcaaacccaggtgaaaggttacctgaatcaagtagatcttcag
gaaaaagcagaccttcaagaaaaggaagcccacgaactgctggattcaggaaagaacaca
gccgtgaccaccaagaacctcctggagaccctttccaagcctgaccagatccccttgttc
tatgctggggggattgagatcctgactgaaatgataaatgagtgcacagaacaaacttta
ttcagaatgcacaatggatttagtatcatcagtgacaacgaggtcataagaaggtgtttt
tccacagcaggaaatgatgcagttgaagaaatggtctgtgtgtctgttctcaagctctgg
caagcagtgtgcagcaggaacgaggaaaaccagcgtgtgctagtgatacaccatgacagg
gccaggctgttggccgccctcttgtcctccaaggtcctggccatccggcagcagagcttt
gccctgctgctgcatctcgcccagactgagagcggacggagcctgatcatcaaccacctt
gacctgaccagattattggaagcgctggtgtcatttcttgatttctcggataaggaggcc
aacactgctatgggactgttcacagacttggctctggaagaaagtgagaccccagggatg
cccctgtgtgacatgaagctatctggttggttcgtgggccttttgaagacagatcccaag
gtaagcagctcctcggctctgtgccagtgcattgccatcatgggaaacctcagtgctgag
cccactacccgaagacacatggcggcctgtgaggaatttggggatggctgcttgagcctc
ctggtttgggctgtggaggtgagcagaaggtgcctgtctttactaaacagccaggatgga
ggaatcctgacaagagctgctggtgttctgagccggaccctttcttcctctctgaaaatt
gttgaggaggccttgcgagcaggagtggtaaagaaaatgatgaaattcctgaagcaggct
tcccaggagaggcagcctgctaatgttcttcttaccaactccctggaatgcacagaaggt
gaactgaaggaggctccaccatggaagcggcaagcctttctcctggatcctgttgcatac
cctgcagagttgagcgttatgatgaagctgctcagctcggaggatgaggttctggtgggc
aacgctgccctctgccttggtaactgcatggaggtgcccaacgttgcgtcttccctgcta
aagacggaccttttgcaggtcttgttaaagcttgcaggcagtgacacacagaagacggcc
gtgcaggtgaacgcaggcattgctctggggaagctgtgcacagctgagcccagaggcaac
gctcccttccagttgccccagggtcactctaaaccagggtcacctgtggactgcaagtcc
ctaaagtgcctgccgagagcagtcatctccaatttggaagagagtctgctgcacctgaag
ctctgtctcctcgcaggtaatcagagtcttctggttcaacaagcagaggagctgggattt
tccatcctaaagaggatgtggccgggatggaactccatcaccatcctgaagccacagcag
aggtggcaggtaacagacagtccagagctgctcactgtcttcatacatgacgtgaggacg
gtggttccagtgcgccgcaagatgaggaaactgaggtgcaaagcagttaagcaactggtc
caagatctagaccaggttgaaggagaacagggagtgtctctaaatttccacagctga

>gi568815587r:113310730_113524651|GENSCAN_predicted_peptide_2|740_aa
MAADPTELRLGSLPVFTRDDFEGDWRLVASGGFSQVFQARHRRWRTEYAIKCAPCLPPDA
ASSDVNYLIEEAAKMKKIKFQHIVSIYGVCKQPLGIVMEFMANGSLEKVLSTHSLCWKLR
FRIIHETSLAMNFLHSIKPPLLHLDLKPGNILLDSNMHVKISDFGLSKWMEQSTRMQYIE
RSALRGMLSYIPPEMFLESNKAPGPKYDVYSPPTLPPRAGVILDVQLSHSERVLCIHSFA
IVIWELLTQKKPYSDITIETDILLSLLQSRVAVPESKALARKVSCKLSLRQPGEVNEDIS
QELMDSDSGNYLKRALQLSDRKNLVPRDEELCIYENKVTPLHFLVAQGSVEQVRLLLAHE
VDVDCQTASGYTPLLIAAQDQQPDLCALLLAHGADANRVDEDGWAPLHFAAQNGDDGTAR
LLLDHGACVDAQEREGWTPLHLAAQNNFENVARLLVSRQADPNLHEAEGKTPLHVAAYFG
HVSLVKLLTSQGAELDAQQRNLRTPLHLAVERGKVRAIQHLLKSGAVPDALDQSGYGPLH
TAAARGKYLICKMLLRYGASLELPTHQGWTPLHLAAYKGHLEIIHLLAESHANMGALGAV
NWTPLHLAARHGEEAVVSALLQCGADPNAAEQSGWTPLHLAVQRSTFLSVINLLEHHANV
HARNKVGWTPAHLAALKGNTAILKVLVEAGAQLDVQDGVSCTPLQLALRSRKQGIMSFLE
GKEPSVATLGGSKPGAEMEI

>gi568815587r:113310730_113524651|GENSCAN_predicted_CDS_2|2223_bp
atggctgccgaccccaccgagctgcggctgggcagcctccccgtcttcacccgcgacgac
ttcgagggcgactggcgcctagtggccagcggcggcttcagccaggtgttccaggcgcgg
cacaggcgctggcggacggagtacgccatcaagtgcgccccctgccttccacccgacgcc
gccagctctgatgtgaattacctcattgaagaagctgccaaaatgaagaagatcaagttt
cagcacatcgtgtctatctacggggtgtgcaagcagcccctgggtattgtgatggagttt
atggccaacggctccctggagaaggtgctgtccacccacagcctctgctggaagctcagg
ttccgcatcatccatgagaccagcttggccatgaacttcctgcacagcattaagccgcct
ctgctccacctggacctcaagccgggcaacatactcctggacagcaacatgcatgtcaaa
atttcagacttcggcctgtccaagtggatggaacagtccacccggatgcagtacatcgag
aggtcggctctgcggggcatgctcagctacatcccccctgagatgttcctggagagtaac
aaggccccaggacctaaatatgatgtgtacagccccccgaccctgccaccccgggctggg
gtgatcttggatgttcaactaagtcattcagaaagggttctctgcatccacagctttgca
attgtcatctgggagctactcactcagaagaaaccatactcagacattaccatcgagaca
gacatactgctgtcactgctgcagagtcgtgtggcagtcccagagagcaaggccctggcc
aggaaggtgtcctgcaagctgtcgctgcgccagcccggggaggttaatgaggacatcagc
caggaactgatggacagtgactcaggaaactacctgaagcgggcccttcagctctccgac
cgtaagaatttggtcccgagagatgaggaactgtgtatctatgagaacaaggtcaccccc
ctccacttcctggtggcccagggcagtgtggagcaggtgaggttgctgctggcccacgag
gtagacgtggactgccagacggcctctggatacacgcccctcctgatcgccgcccaggac
cagcaacccgacctctgtgccctgcttttggcacatggtgctgatgccaaccgagtggat
gaggatggctgggccccactgcactttgcagcccagaatggggatgacggcactgcgcgc
ctgctcctggaccacggggcctgtgtggatgcccaggaacgtgaagggtggacccctctt
cacctggctgcacagaataactttgagaatgtggcacggcttctggtctcccgtcaggct
gaccccaacctgcatgaggctgagggcaagacccccctccatgtggccgcctactttggc
catgttagcctggtcaagctgctgaccagccagggggctgagttggatgctcagcagaga
aacctgagaacaccactgcacctggcagtagagcggggcaaagtgagggccatccaacac
ctgctgaagagtggagcggtccctgatgcccttgaccagagcggctacggcccactgcac
actgcagctgccaggggcaaatacctgatctgcaagatgctgctcaggtacggagccagc
cttgagctgcccacccaccagggctggacacccctgcatctagcagcctacaagggccac
ctggagatcatccatctgctggcagagagccacgcaaacatgggtgctcttggagctgtg
aactggactcccctgcacctagctgcacgccacggggaggaggcggtggtgtcagcactg
ctgcagtgtggggctgaccccaatgctgcagagcagtcaggctggacacccctccacctg
gcggtccagaggagcaccttcctgagtgtcatcaacctcctagaacatcacgcaaatgtc
cacgcccgcaacaaggtgggctggacacccgcccacctggccgccctcaagggcaacaca
gccatcctcaaagtgctggtcgaggcaggcgcccagctggacgtccaggatggagtgagc
tgcacacccctgcaactggccctccgcagccgaaagcagggcatcatgtccttcctagag
ggcaaggagccgtcagtggccactctgggtggttctaagccaggagccgagatggaaatt
tag

>gi568815587r:113310730_113524651|GENSCAN_predicted_peptide_3|784_aa
MGTTEQSVAVQPSGPPDFTPGPGEGGAAVFGGWSRSGQVWTCKGYDMLEDPKFPEGIYTD
LSLFSICAALFLSVHFLEDADDDDPTVTRMVVTRIEPFPGVREPCRIKQGTCLETLIAIL
VLKAIGSMNLGLDTKTVFVWESSSPILPAHPSIARRPPIAFAKWERKVPGVSLLEPKDEK
RGDKGFRRPCLTPLQTLEACNKTLHTPAPGLRGFALQTVTVPVHLPTPTLGNPRAWPPSG
STALMDPLNLSWYDDDLERQNWSRPFNGSDGKADRPHYNYYATLLTLLIAVIVFGNVLVC
MAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLELILGPCPGPAGKPFTYPPAST
RKMGIQLLAPAKLVSAAAQGAGREALVRGPHVVGEWKFSRIHCDIFVTLDVMMCTASILN
LCAISIDRYTAVAMPMLYNTRYSSKRRVTVMISIVWVLSFTISCPLLFGLNNADQNECII
ANPAFVVYSSIVSFYVPFIVTLLVYIKIYIVLRRRRKRVNTKRSSRAFRAHLRAPLKGNC
THPEDMKLCTVIMKSNGSFPVNRRRVGSPLAMVLRPQKLANGRSTPETPTLPQLKADSPC
TPPSRHEVRHLGSARHGCVRENGWPYQRNKNDNNGYSHFSNIYHIPIISSNPHHDPGSTP
DSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTSLKTMSRRKLSQQKEKKATQMLAIVL
GVFIICWLPFFITHILNIHCDCNIPPVLYSAFTWLGYVNSAVNPIIYTTFNIEFRKAFLK
ILHC

>gi568815587r:113310730_113524651|GENSCAN_predicted_CDS_3|2355_bp
atgggcacaacagaacagagtgtggccgtgcagcccagcgggcctcccgactttacccca
ggccccggggagggtggggctgctgtctttggaggctggagcagaagtgggcaggtttgg
acttgcaagggctatgacatgctagaggatcccaagttccctgagggcatctacacagat
ctgagtttgttcagcatttgtgcagccctcttcttgtctgttcatttccttgaagatgca
gatgatgatgatcctacagtgaccaggatggtagtgacaaggattgagccctttccagga
gtcagagagccctgtaggataaagcaggggacctgtctagagaccttaattgcaatcctg
gttctgaaagcaataggctctatgaacctgggtcttgacaccaaaacagtatttgtgtgg
gagtcctcaagtcccatcttgcctgcccacccctccattgcaagaaggcctcccatcgcc
tttgccaaatgggaaagaaaggtccccggtgtcagcctgctggagccgaaggatgagaaa
cgtggggacaagggcttccggagaccctgcctcaccccgctgcagaccctggaggcctgc
aacaagaccctccacaccccagctccagggcttagaggctttgccctccagacagtgact
gtgcctgtccatctacccactcccaccctcggcaacccaagagcctggccacccagtggc
tccaccgccctgatggatccactgaatctgtcctggtatgatgatgatctggagaggcag
aactggagccggcccttcaacgggtcagacgggaaggcggacagaccccactacaactac
tatgccacactgctcaccctgctcatcgctgtcatcgtcttcggcaacgtgctggtgtgc
atggctgtgtcccgcgagaaggcgctgcagaccaccaccaactacctgatcgtcagcctc
gcagtggccgacctcctcgtcgccacactggtcatgccctgggttgtctacctggagctt
atcctggggccctgtccaggacctgcaggaaagccctttacgtaccctcctgcctccacc
cgcaaaatgggcatccagctgttagctcctgccaaactggtcagcgcagcagcacaggga
gctgggagagaggccctggtacggggcccccatgtggtaggtgagtggaaattcagcagg
attcactgtgacatcttcgtcactctggacgtcatgatgtgcacggcgagcatcctgaac
ttgtgtgccatcagcatcgacaggtacacagctgtggccatgcccatgctgtacaatacg
cgctacagctccaagcgccgggtcaccgtcatgatctccatcgtctgggtcctgtccttc
accatctcctgcccactcctcttcggactcaataacgcagaccagaacgagtgcatcatt
gccaacccggccttcgtggtctactcctccatcgtctccttctacgtgcccttcattgtc
accctgctggtctacatcaagatctacattgtcctccgcagacgccgcaagcgagtcaac
accaaacgcagcagccgagctttcagggcccacctgagggctccactaaagggcaactgt
actcaccccgaggacatgaaactctgcaccgttatcatgaagtctaatgggagtttccca
gtgaacaggcggagagtgggaagcccactggccatggttctgagacctcagaagctggcc
aatgggagaagcaccccagaaacccccaccttgcctcagctgaaggcagactcaccgtgc
acacctccaagcaggcatgaagtgagacacctcggttctgcaaggcatggatgtgtacga
gaaaatggttggccataccaacgtaataaaaatgataataatggctattcacatttctca
aacatctaccatatccctattatctcatcaaatcctcaccacgaccccgggagcactccc
gacagccccgccaaaccagagaagaatgggcatgccaaagaccaccccaagattgccaag
atctttgagatccagaccatgcccaatggcaaaacccggacctccctcaagaccatgagc
cgtaggaagctctcccagcagaaggagaagaaagccactcagatgctcgccattgttctc
ggcgtgttcatcatctgctggctgcccttcttcatcacacacatcctgaacatacactgt
gactgcaacatcccgcctgtcctgtacagcgccttcacgtggctgggctatgtcaacagc
gccgtgaaccccatcatctacaccaccttcaacattgagttccgcaaggccttcctgaag
atcctccactgctga

>gi568815587r:113310730_113524651|GENSCAN_predicted_peptide_4|190_aa
IAFGLELEHQLSWVSSLLAHPEDFEFTKLHDHVIETGSWRMQQGGLQALIEWWLTTTTGI
CQMSTLCMALCQVIYKLYVNGFLLKPFEAGDRRGEPAELLPAGALNGAAGPGARDRPRRV
AAPDGCRRGGRAWMRRELEASSSRRRLCPRAPYGLKLQRMEEKQKKGEDRVASGYKDVDE
RAEIGGSYRE

>gi568815587r:113310730_113524651|GENSCAN_predicted_CDS_4|573_bp
atagcttttggacttgaactggaacatcagctctcttgggtctccagcctgctggcccac
cctgaagattttgaatttaccaaactccatgatcatgtcatagaaacaggaagctggcgc
atgcaacagggtgggctacaggctttgatagaatggtggctaacaacaacaactggtatt
tgtcagatgtctacactgtgcatggcattatgtcaggtgatctacaagctttacgtcaat
ggattcttactgaaaccctttgaggccggggatcgccgaggagagccggccgagctgctg
cccgccggggctctgaacggcgcggcggggccgggagccagggaccggccgaggagagtg
gcggccccggacggctgccggaggggcggccgcgcgtggatgcggcgggagctggaagcc
tcaagcagccggcgccgtctctgcccccgggcgccctatggcttgaagctacagagaatg
gaagaaaaacagaagaaaggtgaagacagggtggcaagtgggtataaagatgtggatgag
agagctgaaataggtggaagttacagggaatag