GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:18:34

Sequence gi568815597r:23210457_23441008 : 230552 bp : 45.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16587  16780  194  2  2   64   58    77 0.053   0.74
 1.02 Intr +  22135  22223   89  1  2  110   80    15 0.144   2.51
 1.03 Term +  34408  34775  368  2  2   -7   44   447 0.840  25.57
 1.04 PlyA +  34872  34877    6                               1.05

 2.12 PlyA -  35074  35069    6                               1.05
 2.11 Term - 100610  99998  613  1  1   95   42   461 0.752  36.16
 2.10 Intr - 100866 100745  122  0  2   70   66    95 0.999   4.79
 2.09 Intr - 103246 103097  150  1  0   92   97    82 0.999   9.86
 2.08 Intr - 108232 108027  206  2  2   53   94   166 0.999  12.62
 2.07 Intr - 111207 111072  136  0  1   95   98    73 0.998   9.14
 2.06 Intr - 113276 113100  177  2  0   24   84    96 0.747   2.92
 2.05 Intr - 123175 123062  114  1  0   32  107    69 0.640   3.84
 2.04 Intr - 127405 127298  108  1  0   83   93    45 0.924   4.98
 2.03 Intr - 128152 128034  119  2  2   82  110   104 0.999  12.18
 2.02 Intr - 130564 130396  169  1  1   55   75   109 0.037   5.82
 2.01 Init - 134390 134328   63  2  0   80   37    99 0.066   3.16
 2.00 Prom - 139987 139948   40                              -2.66

 3.29 PlyA - 143156 143151    6                               1.05
 3.28 Term - 152765 151513 1253  0  2   76   43  1045 0.995  90.55
 3.27 Intr - 156712 156586  127  1  1  -14   97   101 0.825   1.05
 3.26 Intr - 157609 157517   93  1  0  109  115    26 0.581   7.56
 3.25 Intr - 171075 170987   89  1  2  112  100    59 0.716   9.19
 3.24 Intr - 173961 173886   76  0  1  119   31    70 0.916   3.49
 3.23 Intr - 176963 176817  147  2  0   95  110   245 0.988  27.83
 3.22 Intr - 183565 183423  143  2  2   30   78   295 0.944  22.77
 3.21 Intr - 184589 184392  198  0  0   81  100    30 0.696   2.82
 3.20 Intr - 187145 187029  117  0  0   88   51   103 0.811   7.04
 3.19 Intr - 187499 187336  164  1  2   91   93   154 0.997  15.82
 3.18 Intr - 198270 198208   63  2  0   78   98    33 0.220   1.13
 3.17 Intr - 206934 206793  142  1  1   86   66   148 0.917  11.81
 3.16 Intr - 207553 207448  106  1  1   77   66   161 0.970  12.59
 3.15 Intr - 208683 208621   63  0  0  108   75    76 0.960   7.21
 3.14 Intr - 212378 212175  204  2  0   96   43    96 0.937   5.30
 3.13 Intr - 214228 214109  120  1  0   42   89   162 0.354  12.39
 3.12 Intr - 220669 220579   91  0  1   92   74    10 0.321  -0.00
 3.11 Intr - 221462 221240  223  0  1   72   77    95 0.406   3.99
 3.10 Intr - 222816 222621  196  0  1   85   77    93 0.942   6.89
 3.09 Intr - 223237 222969  269  2  2  100   98   166 0.528  16.05
 3.08 Intr - 223913 223798  116  1  2  106   75   180 0.999  18.59
 3.07 Intr - 224162 224077   86  2  2   35   80   110 0.999   3.52
 3.06 Intr - 225572 225395  178  1  1   49   94   192 0.978  15.82
 3.05 Intr - 226198 226104   95  1  2   65   75    65 0.999   1.66
 3.04 Intr - 226588 226455  134  2  2  103   73   164 0.999  16.76
 3.03 Intr - 226864 226674  191  0  2  109   67   252 0.999  24.43
 3.02 Intr - 227141 226968  174  1  0   86   69   191 0.762  16.05
 3.01 Intr - 228378 228284   95  0  2   70  -23   163 0.480   2.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 130552 130396  157  1  1   55   75   117 0.924   7.17
S.002 Init + 134273 134403  131  1  2  110   49   140 0.855   9.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:23210457_23441008|GENSCAN_predicted_peptide_1|216_aa
MPILWMNNLRLRGLKKLSPGYLGELQNNNNNNNNNKSHLLTGDYWIPGAVFRSTLHMKSP
SPPVRQEECREEMRQFVQRTATVSMSQKEIYTTLRGGPQVPEEHVFAKKHNKKVLKKMQA
NSAKAVSARAEAIEALVNPKEVKPKIPKGVSRKLDRLAYIAHPKLGKRAHARIVKGLRLC
RPKAKAKDQMKAQATAAASVPVRAPRGAQAPTKASE

>gi568815597r:23210457_23441008|GENSCAN_predicted_CDS_1|651_bp
atgcccattttatggatgaacaatctgaggctcagaggactgaaaaagctctccccaggt
tatctcggggagctgcaaaacaacaacaacaacaacaacaacaacaagagccacctgtta
acaggggattactggataccaggtgctgtcttcagaagtactttgcatatgaagtctccc
agtccacccgtgaggcaggaagaatgcagagaagagatgaggcaatttgtacaaaggaca
gcaactgtatccatgtcccagaaggaaatctatacaaccttgaggggtggaccccaagtt
cctgaggaacacgtgtttgccaagaagcacaacaagaaggtcctaaagaagatgcaggcc
aacagtgccaaggccgtgagtgcacgtgccgaggctatcgaggccctcgtaaaccccaag
gaggttaagcccaagatcccaaagggtgttagccgcaagcttgatcgacttgcctacatt
gcccaccccaagcttgggaagcgtgctcatgcccgcattgtcaaggggctcaggctgtgc
cggccaaaggccaaggccaaggatcaaatgaaggcccaggctacagctgcagcttcagtt
ccagttcgggctcccagaggtgcccaggcccctacaaaggcttcagagtag

>gi568815597r:23210457_23441008|GENSCAN_predicted_peptide_2|658_aa
MTERGPNAWLWACLGGTPAAGQHNKMANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIE
AGLPQKVAERLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKS
AFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSV
YSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCG
KEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVD
VILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPE
VMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMN
GKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGR
GGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPP
RGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKA
DGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK

>gi568815597r:23210457_23441008|GENSCAN_predicted_CDS_2|1977_bp
atgaccgaaagaggcccgaacgcgtggctatgggcgtgtctggggggaacgccggccgcg
gggcagcataataaaatggctaatcaggtgaatggtaatgcggtacagttaaaagaagag
gaagaaccaatggatacttccagtgtaactcacacagaacactacaagacactgatagag
gcaggcctcccacagaaggtggcagaaagacttgatgaaatatttcagacaggattggta
gcttatgtcgatcttgatgaaagagcaattgatgctctcagggaatttaatgaagaagga
gctctgtctgtactacagcagttcaaggaaagtgacttatcacatgttcagaacaaaagt
gcatttttatgtggagttatgaagacctacaggcagagagagaaacaggggagcaaggtg
caagagtccacaaagggacctgatgaagcgaagatcaaggccttgcttgagagaactggt
tatactctggatgtaaccacaggacagaggaagtatggtggtcctccaccagacagtgtg
tactctggcgtgcaacctggaattggaacggaggtatttgtaggcaaaataccaagggat
ttatatgaggatgagttggtgcccctttttgagaaggccggacccatttgggatctacgt
cttatgatggatccactgtccggtcagaatagagggtatgcatttatcaccttctgtgga
aaggaagctgcacaggaagccgtgaaactgtgtgacagctatgaaattcgccctggtaaa
caccttggagtgtgcatttctgtggcaaacaacagactttttgttggatccattccgaag
aataagactaaagaaaacattttggaagaattcagtaaagtcacagagggtttggtggac
gttattctctatcatcaacccgatgacaaaaagaagaatcgggggttctgcttccttgaa
tatgaggatcacaagtcagcagcacaagccagacgccggctgatgagtggaaaagtaaaa
gtgtggggaaatgtagttacagttgaatgggctgaccctgtggaagaaccagatccagaa
gtcatggctaaggtaaaagttttgtttgtgagaaacttggctactacggtgacagaagaa
atattggaaaagtcattttctgaatttggaaaactcgaaagagtaaagaagttgaaagat
tatgcatttgttcattttgaagacagaggagcagctgttaaggctatggatgaaatgaat
ggcaaagaaatagaaggggaagaaattgaaatagtcttagccaagccaccagacaagaaa
aggaaagagcgccaagctgctagacaggcctccagaagcactgcgtatgaagattattac
taccaccctcctcctcgcatgccacctccaattagaggtcggggtcgtggtggggggaga
ggtggatatggctaccctccagattactacggctatgaagattactatgatgattactat
ggttatgattatcacgactatcgtggaggctatgaagatccctactacggctatgatgat
ggctatgcagtaagaggaagaggaggaggaaggggagggcgaggtgctccaccaccacca
agggggaggggagcaccacctccaagaggtagagctggctattcacagaggggggcacct
ttgggaccaccaagaggctctaggggtggcagagggggtcctgctcaacagcagagaggc
cgtggttcccgtggatctcggggcaatcgtgggggcaatgtaggaggcaagagaaaggca
gatgggtacaaccagcctgattccaagcgtcgtcagaccaacaaccaacagaactggggt
tcccaacccatcgctcagcagccgcttcagcaaggtggtgactattctggtaactatggt
tacaataatgacaaccaggaattttatcaggatacttatgggcaacagtggaagtag

>gi568815597r:23210457_23441008|GENSCAN_predicted_peptide_3|1650_aa
INRPPVKLTLLTCQVRPNPEEKKCFDLVTRECLRVRLVRDTSPCGPSGFGGGSLGSGKAS
SISVGQKPPSLPTDNRTYHFQAEDEHECEAWVSVLQNSKDEALSSAFLGEPSAGPGSWGS
AGHDGEPHDLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVR
FSRMQSLTLDLLGPSELLLALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAK
YVEHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAV
KVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA
GETALDIARKKHHKECEELVRTRGGKGPLTLSLSLLSPQPSEPPSLCFWQLEQAQAGTFA
FPLHVDYSWVISTEPGSDSEEDEEEKRCLLKLPAQAHWASGRLDISNKTYETVASLGAAT
PQGESEDCPPPLPVKNSSRTLVQGCARHASGDRSEVSSLSSEAPETPESLGSPASSSSLM
SPLEPGDPSQAPPNSEEGLREPPGTSRPSLTSGTTPSEMYLPVRFSSESTRSYRRGARSP
EDGPSARQPLPRRNVPALLLPLCPSPRRASRANMGQEEELLRIAKKLEKMVARKNTAKAT
QPSLSGPRVSSSVKWEEEMVSFGDGFLWKCPELSPEKMQVWPQGPCSMEPVYSHVCAWAL
GSVWEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL
DSPGPPKGEKGEEREKAKKKEKGLECSDWKPEAGLSPPRKKREDPKTRRDSVDSKSSASS
SPKRPSVERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL
KADDDYKDYGVNCDKMASEIEDHILELCRGCGCLHRLAAPIQVSLLYMALPSNSFVFLIF
FGSGDQENEAVFPELLQRVEGVGGSEACLGCSVWTETLWLVARDDFLPELKSTDMKYRNR
VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM
AKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVSSLEDAEKPF
KFCCLSGFVVLLMEQPAMNKRCLLAAFPALSPWRRTLVLEMAATLLMAGSQAPVTFEDMA
MYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSENEVNPKQEISEDVQFGTTSE
RPAENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHIC
SHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECG
KSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFS
RSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSD
LVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITH
QKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVH
TGEKPYECTECEKSFSRSSALIKHKRVHTD

>gi568815597r:23210457_23441008|GENSCAN_predicted_CDS_3|4953_bp
ataaaccggcccccggtgaagctgaccctgctgacgtgccaagtgaggccaaaccctgag
gagaaaaagtgcttcgacctggtgacccgtgagtgcttgagagtccgacttgtcagggac
acatctccatgtggccccagcggctttggtgggggctccctgggctccgggaaggccagc
agcatttctgtgggtcagaagcccccttctctcccgacagacaaccggacgtaccacttt
caggcagaggacgagcacgagtgtgaggcgtgggtgtcagtgttgcagaacagcaaggac
gaagccctgagcagcgccttcctcggggagcccagcgctggcccggggtcctgggggtcc
gccggccatgatggggagccgcacgacctcacaaagctgctcatcgcggaggtgaagagc
aggcctgggaatagccagtgctgcgactgcggggctgcagaccccacgtggctcagcacc
aacctgggcgtgctcacctgcatccagtgctcgggcgtccaccgcgaactgggcgtgcgc
ttttcgcgcatgcagtcactcaccttggacctgctgggcccctccgagttgttgctggcc
ttgaacatgggaaacacgagcttcaatgaggtcatggaggcccagctaccctcacacggc
ggccctaaaccctcagctgagagtgacatgggcacccgcagggactacattatggccaag
tatgtggagcataggtttgcacgccggtgcacacctgagcctcagcgactctggacagcc
atttgcaacagggacctcctgtcggtactggaggcctttgccaatgggcaggactttgga
cagccgctgccagggcctgatgcacaggcacctgaagaactcgtcttgcatttggctgtc
aaagtcgccaaccaggcttccctgcctctggtggatttcatcatccagaacggtggtcac
ctggatgccaaggctgctgacgggaacacggctctgcactacgcagcactctacaaccag
cccgactgcctcaagctgctgctgaaggggagagctttggttggcacagtaaatgaagca
ggcgagacagctctggacatagccaggaagaagcaccacaaggagtgtgaggagctggtg
aggactcggggaggcaaggggcccctgactctttctctctccctgctgagcccccaaccc
tctgaaccaccaagcctttgtttttggcagctggagcaggcccaggcggggacctttgcc
ttccctctacatgtggactactcctgggtaatttccacagagcctggctctgacagtgag
gaggatgaggaagagaagcgctgcttgctgaagctcccggcccaggctcactgggccagt
gggaggctggacatcagcaacaagacctatgagactgtcgccagcctgggagcagccacc
cctcagggcgagagtgaggactgtcccccgcccttgccagtcaaaaactcttctcggact
ttggtccaagggtgtgcaagacatgccagtggagatcgttctgaagtctccagcctgagt
tcagaggcccctgagacccctgagagcctgggcagtccagcctcctcctccagtctgatg
agccccttggaacctggggatcccagccaagccccacccaactctgaagagggcctccga
gagcccccaggcacctccagacccagcctgacatccgggaccaccccttcggagatgtac
ctccccgtcagattcagctccgagagcactcgctcctatcggcggggggcgcggagccct
gaagatggtccctcagccaggcagcctctgcccagaaggaacgtgccggccctactgctg
cccctgtgcccctcgccccgccgggcgtcgcgggccaacatgggccaggaagaggagctg
ctgaggatcgccaaaaagctggagaagatggtggccaggaagaacacggcaaaagccact
caaccttccctttctggacctcgagtttcctcttctgtgaaatgggaagaggaaatggtg
tcttttggagatggattcctgtggaagtgcccagagctgtcccctgaaaagatgcaagtc
tggccgcagggtccctgcagcatggagccagtttacagccacgtctgcgcctgggctctc
ggcagtgtctgggaaggggccctggaccttctgaagaagctgcacagctgccagatgtcc
atccagctactacagacaaccaggattggagttgctgttaatggggtccgcaagcactgc
tcagacaaggaggtggtgtccttggccaaagtccttatcaaaaactggaagcggctgcta
gactcccctggacccccaaaaggagaaaaaggagaggaaagagaaaaggcaaagaagaag
gaaaaagggcttgagtgttcagactggaagccagaagcaggcctttctccaccaaggaaa
aaacgagaagaccccaaaaccaggagagactctgtggactccaagtcttctgcctcctcc
tctccaaaaagaccatcggtggaaagatcaaacagcagcaaatcaaaagcggagagcccc
aaaacacctagcagccccttgacccccacgtttgcctcttccatgtgtctcctggccccc
tgctatctcacaggggactctgtccgggacaagtgtgtggagatgctgtcagcagccctg
aaggcggacgatgattacaaggactatggagtcaactgtgacaagatggcatcagaaatc
gaagatcatatccttgaactgtgccggggctgtgggtgtctgcaccgtctagcagcaccc
atccaagtctctttattgtatatggctcttcccagcaacagctttgtcttcctgatcttc
tttggctcaggagaccaagaaaatgaggctgtgttccccgagctcctccagagggtggag
ggagtgggaggctcggaagcctgcctaggatgcagtgtttggacagaaactctgtggttg
gtggccagggatgacttcctgccggagctcaagagcacggacatgaagtaccggaaccgc
gtgcgcagccgcataagcaacctcaaggaccccaggaaccccggcctgcggcggaacgtg
ctcagtggggccatctccgcagggcttatagccaagatgacggcagaggaaatggccagt
gatgaactgagggagttgaggaatgccatgacccaggaggccatccgtgagcaccagatg
gccaagactggcggcaccaccactgacctcttccagtgcagcaaatgcaagaagaagaac
tgcacctataaccaggtgcagacacgcagtgctgatgagcccatgactacctttgtctta
tgcaatgaatgtggcaatcgctggaaggtctcctccttggaggatgccgagaaacctttc
aaattttgttgcctttctggttttgtagttctgctgatggaacagccagccatgaacaag
cgctgtctgctagctgcttttcctgctctctctccctggaggcgaacccttgtgctcgag
atggcagccaccctgctcatggctgggtcccaggcacctgtgacgtttgaagatatggcc
atgtatctcacccgggaagaatggagacctctggacgctgcacagagggacctttaccgg
gatgttatgcaggagaattatggaaatgttgtctcactagattttgagatcaggagtgag
aacgaggtaaatcccaagcaagagattagtgaagatgtacaatttgggactacatctgaa
agacctgctgagaatgctgaggaaaatcctgaaagtgaagagggctttgaaagcggagat
aggtcagaaagacaatggggagatttaacagcagaagagtgggtaagctatcctctccaa
ccagtcactgatctacttgtccacaaagaagtccacacaggcatccgctatcatatatgt
tctcattgtggaaaggccttcagtcagatctcagaccttaatcgacatcagaagacccac
actggagacagaccctataaatgttatgaatgtggaaaaggcttcagtcgcagctcacac
cttattcagcatcaaagaacacatactggggagaggccttatgactgtaacgagtgtggg
aaaagttttggaagaagttctcacctgattcagcatcagacaatccacactggagagaag
cctcacaaatgtaatgagtgtggaaaaagtttctgccgtctctctcacctaatccaacac
caaaggacccacagtggtgagaaaccctatgagtgtgaggagtgtgggaaaagcttcagc
cggagctctcacctagctcagcaccagaggacccacacgggtgagaaaccttatgaatgt
aacgaatgtggccgaggcttcagtgagagatctgatctcatcaaacactatcgagtccac
acaggggagaggccctacaagtgtgatgagtgtgggaagaatttcagtcagaactccgac
cttgtgcgtcatcgcagagcccacacgggagagaagccataccactgtaacgaatgtggg
gaaaatttcagccgcatctcacacttggttcagcaccagagaactcacactggagagaag
ccatatgaatgcaatgcttgtgggaaaagcttcagccggagctctcatctcatcacacac
cagaaaattcacactggagagaagccttatgagtgtaatgagtgttggcgaagctttggt
gaaaggtcagatctaattaaacatcagagaacccacacaggggagaagccctacgagtgt
gtgcagtgtgggaaaggtttcacccagagctccaacctcatcacacatcaaagagttcac
acgggagagaaaccttatgaatgtaccgaatgtgagaagagtttcagcaggagctcagct
cttattaaacataagagagttcatacggactaa