GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:15:25

Sequence gi568815597f:51136757_51371319 : 234563 bp : 44.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1517   1512    6                               1.05
 1.02 Term -  21379  21215  165  1  0   49   52   310 0.944  21.42
 1.01 Init -  21715  21419  297  1  0  108   -3   658 0.997  55.92
 1.00 Prom -  28606  28567   40                              -3.26

 2.00 Prom +  36302  36341   40                              -3.46
 2.01 Init +  47622  47630    9  2  0   76   97    14 0.362   0.79
 2.02 Term +  93164  93355  192  1  0   95   40   181 0.627  11.42
 2.03 PlyA +  93557  93562    6                               1.05

 3.03 PlyA -  94034  94029    6                               1.05
 3.02 Term -  96605  96557   49  1  1  121   48    25 0.273  -1.42
 3.01 Init -  99757  99504  254  1  2  100   40   258 0.862  17.01
 3.00 Prom - 112305 112266   40                              -3.86

 4.02 PlyA - 113383 113378    6                               1.05
 4.01 Sngl - 114669 113842  828  0  0   63   46  1106 0.999  99.64
 4.00 Prom - 136792 136753   40                              -3.36

 5.22 PlyA - 136810 136805    6                               1.05
 5.21 Term - 151524 151401  124  2  1   83   33    74 0.800  -0.74
 5.20 Intr - 152199 152083  117  2  0   76   80   173 0.861  14.88
 5.19 Intr - 153363 153249  115  1  1   79  108   106 0.999  11.21
 5.18 Intr - 153869 153758  112  2  1   78   62   199 0.673  16.25
 5.17 Intr - 157755 157635  121  2  1  124   68   181 0.945  20.20
 5.16 Intr - 159414 159323   92  0  2  107   72   156 0.990  14.69
 5.15 Intr - 164977 164816  162  1  0    2   86   307 0.954  22.07
 5.14 Intr - 165660 165601   60  0  0   75   73    49 0.648   1.03
 5.13 Intr - 165817 165750   68  2  2  110  105   179 0.853  20.42
 5.12 Intr - 166436 166328  109  2  1  123   86   147 0.999  17.86
 5.11 Intr - 169320 169221  100  2  1   66  105   117 0.710  11.31
 5.10 Intr - 172569 172505   65  0  2  105   89   114 0.615  10.72
 5.09 Intr - 174565 174498   68  2  2   96   91    80 0.996   7.72
 5.08 Intr - 175439 175363   77  1  2  129   70    73 0.999   8.76
 5.07 Intr - 176187 176056  132  2  0   92   31   203 0.986  14.76
 5.06 Intr - 185069 184965  105  1  0  122   94   173 0.982  20.63
 5.05 Intr - 189488 189362  127  0  1   74   42    45 0.007  -1.76
 5.04 Intr - 198972 198892   81  1  0  111   80    38 0.002   4.91
 5.03 Intr - 208040 207954   87  0  0   93   89    38 0.042   4.34
 5.02 Intr - 208368 208126  243  1  0   66   61   107 0.495   3.27
 5.01 Init - 215881 215875    7  1  1   81   87     0 0.124   0.29
 5.00 Prom - 218352 218313   40                              -4.96

 6.04 PlyA - 218505 218500    6                               1.05
 6.03 Term - 220090 219944  147  1  0   29   49   171 0.976   5.20
 6.02 Intr - 224537 224415  123  2  0   47   87    58 0.411   2.38
 6.01 Intr - 229273 229197   77  2  2   81   84    46 0.672   2.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  48962  49033   72  1  0   80   39    88 0.894   1.01
S.002 Term + 134395 134566  172  1  1  106   52   110 0.990   6.50
S.003 Init + 193905 193976   72  2  0   97   94    99 0.862  10.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:51136757_51371319|GENSCAN_predicted_peptide_1|153_aa
MASGVAVSDGVIKVFKDMKMHKSSMPEEVKKCKKVVFFCLSEDKKNIILEEGKEILVGDV
GQTVNNLYATFVKMLPYKDYRYTLYDTTYETKESKEEDLSKIIYASSKDAIKKKLTGIKH
ALQANCYEDVKDHCTLAEMLGGSAIISLEGKPL

>gi568815597f:51136757_51371319|GENSCAN_predicted_CDS_1|462_bp
atggcctcaggggtggccgtctctgatggtgtcatcaaggtgttcaaggacatgaagatg
cataagtcttcaatgccagaggaggtgaagaagtgcaagaaggtggtgttcttctgcctg
agtgaggacaagaagaacattatcctggaggagggcaaggagatcctggtgggcgatgtg
ggccagactgtcaacaacctctatgccacctttgtcaagatgctgccatataaggactac
cgctacaccctctatgacacaacctacgagaccaaggagagcaaggaggaggacctgagc
aaaataatctatgccagctccaaggacgccatcaagaagaagctgacagggatcaagcat
gcattacaagcaaactgctacgaggatgtcaaggaccactgcaccctggcagagatgctg
gggggcagtgccatcatctccctggagggcaagcctttgtga

>gi568815597f:51136757_51371319|GENSCAN_predicted_peptide_2|66_aa
MVKNRSCKLQMVLQMEPQMQPMTKIYWGPLDWPASPCSDVDDIEGNPPEEISTAQPLLHP
NSAVSS

>gi568815597f:51136757_51371319|GENSCAN_predicted_CDS_2|201_bp
atggtgaagaatcgaagctgtaaactacaaatggttcttcaaatggagccccagatgcag
cccatgactaagatctactggggtcccctggactggcctgctagcccatgctccgatgtt
gatgacatcgaaggcaaccctccagaggaaatctcaactgcacaacccctacttcacccc
aattcagcagtaagcagttag

>gi568815597f:51136757_51371319|GENSCAN_predicted_peptide_3|100_aa
MGGGGRGDEALPHPAPPRGGGGHGAAGPNPGQRGGARPSRLPQLLPQLLLPPPTPEPRPR
ASSYSASARRRQPERGRLGHCVIAPWVTLTQALEKFYSAL

>gi568815597f:51136757_51371319|GENSCAN_predicted_CDS_3|303_bp
atgggggggggggggcggggagacgaagcacttccccaccccgcccccccgcggggcggc
ggcggccacggagctgctgggcctaatccaggtcagcgggggggggcgcggccgtcgcgg
ctgcctcagctgctgcctcagctgctgctgcccccgccgacgccggagccacggccgcgg
gcctcatcctactccgcctcagcgagacggcggcagccagaacgaggccggctcgggcac
tgcgtcatcgcgccgtgggtaacactgacacaagcccttgaaaagttctatagtgccttg
tga

>gi568815597f:51136757_51371319|GENSCAN_predicted_peptide_4|275_aa
MGNCGGFRGGFGSGIRGRGRSRRRGRGRGRGARGGKAEDKEWMPVTKLGCLVKDMKIKSL
EEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQTQTRAGQRTRFKAFVAIGDYNGHVG
LGVKCSKEVATAIHGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSALVHLIPV
PRGTGIVSAPVPKKLLMMAGIDDCCTSAWGCTATLGNFAKATFDAISKTYSYLTPDLWKE
TVFTKSPDQEFTDHLIKAHARVSVQRTQAPAVATT

>gi568815597f:51136757_51371319|GENSCAN_predicted_CDS_4|828_bp
atggggaactgcggtggcttccgcggaggtttcggcagtggcatccggggccggggtcgc
agccgtagacggggccggggccgaggccgcggagctcgcggaggcaaggccgaggataag
gagtggatgcccgtcaccaagctgggctgcttggtgaaggacatgaagatcaagtccctg
gaggagatctatctcttctccctgcccattaaggaatcagagatcattgactttttcctg
ggggcctctctcaaggatgaggttttgaagattatgccagtgcagacgcagacccgtgct
ggccagcgcaccaggttcaaggcgtttgttgctatcggggactacaatggccacgtcggt
ctgggtgttaagtgctccaaggaggtggccaccgccatccatggggccatcatcctggcc
aagctctccattgtccccgtgcgcagaggctactgggggaacaagattggcaagccccac
accgtcccttgcaaggtgacaggccgctgcggctctgcactggtgcacctcatccctgta
cccaggggcactggcattgtctccgcacctgtgcccaagaagctgctcatgatggctggt
atcgatgactgctgcacctcagcctggggctgcactgccaccctgggcaacttcgccaag
gccacctttgatgccatttctaagacctacagctacctgacccccgacctctggaaggag
actgtatttaccaagtctcccgatcaggaattcactgaccacctcatcaaggcccacgcc
agagtctccgtgcagcggacccaggctccagctgtggctacaacatag

>gi568815597f:51136757_51371319|GENSCAN_predicted_peptide_5|723_aa
MKGAATVASTAAAAAARGRPRPRPSPARAHGLSDHLEGGGLREKRPQVPGRGGDSAEGAD
GTKGPPEDPADVGETAERHSWGKAGRELGRVDAVPPERRSVSQDAGYLRSQLENKESRPG
FELRLDVGPSLYFLICRMGASSVPQAELEVSSGPLWPPVIPMITALSTVAVTALSASVTC
RLTPESSLHEALDQCMTALDLFLTNQFSEALSYLKPRTKESMYHSLTYATILEMQAMMTF
DPQDILLAGNMMKEAQMLCQRHRRKSSVTDSFSSLVNRPTLGQFTEEEIHAEVCYAECLL
QRAALTFLQDENMVSFIKGGIKVRNSYQTYKELDSLVQSSQYCKGENHPHFEGGVKLGVG
AFNLDYGLLQLEEGASGHSFRSVLCVMLLLCYHTFLTFVLGTGNVNIEEAEKLLKPYLNR
YPKGAIFLFFAGRIEVIKGNIDAAIRRFEECCEAQQHWKQFHHMCYWELMWCFTYKGQWK
MSYFYADLLSKENCWSKATYIYMKAAYLSMFGKEDHKPFGDDEVELFRAVPGLKLKIAGK
SLPTEKFAIRKSRRYFSSNPISLPVPALEMMYIWNGYAVIGKQPKLTDGILEIITKAEEM
LEKGPENEYSVDDECLVKLLKGLCLKYLGRVQEAEENFRSISANEKKIKYDHYLIPNALL
ELALLLMEQDRNEEAIKLLESAKQNYKNYSMESRTHFRIQAATLQAKSSLENSSRSMVSS
VSL

>gi568815597f:51136757_51371319|GENSCAN_predicted_CDS_5|2172_bp
atgaaaggtgctgccactgtagcctccacggccgccgccgccgccgcgaggggccgcccg
cggccccgtccgagcccggcccgcgcccatggcctttctgaccacctggaaggaggcggc
ctccgggaaaagcgaccgcaggtaccgggcaggggtggggactcggcggaaggcgcggac
gggaccaaggggccgccggaggacccagccgacgtcggggaaacagctgagaggcacagc
tggggaaaggcagggcgggaactggggagggtagacgcggtcccacctgagcgccgctca
gtgtcgcaagacgcgggctatctgcgaagtcagctcgagaataaggaatcaagacctggg
ttcgagctacggctagatgttggtccaagcctctattttctcatctgtaggatgggagcc
tcctcagtgccccaggctgagttagaggtgtcttctgggcccctttggcccccagtgatt
cccatgatcacagccctgagcactgtagcggtcactgccctgtctgcatctgtcacctgt
aggctgactcctgagagcagcctccatgaggccctggaccagtgcatgaccgccctggac
ctcttcctcaccaaccagttctcagaagcactcagctacctcaagcccagaaccaaggaa
agcatgtaccactcactgacatatgccaccatcctggagatgcaggccatgatgaccttt
gaccctcaggacatcctgcttgccggcaacatgatgaaggaggcacagatgctgtgtcag
aggcaccggaggaagtcttctgtaacagattccttcagcagcctggtgaaccgccccacg
ctgggccaattcactgaagaggaaatccacgctgaggtctgctatgcagagtgcctgctg
cagcgagcagccctgaccttcctgcaggacgagaacatggtgagcttcatcaaaggcggc
atcaaagttcgaaacagctaccagacctacaaggagctggacagccttgttcagtcctca
caatactgcaagggtgagaaccacccgcactttgaaggaggagtgaagcttggtgtaggg
gccttcaacctggactatgggctgctgcagctggaggagggagcgtcagggcacagcttc
cgctctgtgctctgtgtcatgctcctgctgtgctaccacaccttcctcaccttcgtgctc
ggtactgggaacgtcaacatcgaggaggccgagaagctcttgaagccctacctgaaccgg
taccctaagggtgccatcttcctgttctttgcagggaggattgaagtcattaaaggcaac
attgatgcagccatccggcgtttcgaggagtgctgtgaggcccagcagcactggaagcag
ttccaccacatgtgctactgggagctgatgtggtgcttcacctacaagggccagtggaag
atgtcctacttctacgccgacctgctcagcaaggagaactgctggtccaaggccacctac
atttacatgaaggccgcctacctcagcatgtttgggaaggaggaccacaagccgttcggg
gacgacgaagtggaattatttcgagctgtgccaggcctgaagctcaagattgctgggaaa
tctctacccacagagaagtttgccatccggaagtcccggcgctacttctcctccaaccct
atctcgctgccagtgcctgctctggaaatgatgtacatctggaacggctacgccgtgatt
gggaagcagccgaaactcacggatgggatacttgagattatcactaaggctgaagagatg
ctggagaaaggcccagagaacgagtactcagtggatgacgagtgcttggtgaaattgttg
aaaggcctgtgtctgaaatacctgggccgtgtccaggaggccgaggagaattttaggagc
atctctgccaatgaaaagaagattaaatatgaccactacttgatcccaaacgccctgctg
gagctggccctgctgcttatggagcaagacagaaacgaagaggccatcaaacttttggaa
tctgccaagcaaaactacaagaattactccatggagtcaaggacacactttcgaatccag
gcagccacactccaagccaagtcttccctagagaacagcagcagatccatggtctcatca
gtgtccttgtag

>gi568815597f:51136757_51371319|GENSCAN_predicted_peptide_6|115_aa
XTDPFASVFGNESFGGGFADFSTLSKPFPGNDSPKEKDPEIFCDPFTSATTTTNKEADPS
NFANFSAYPSEEDMIEWAKRESEREEEQRLARLNQQEQEDLELAIALSKSEISEA

>gi568815597f:51136757_51371319|GENSCAN_predicted_CDS_6|348_bp
nccacagacccctttgcttctgtttttgggaatgaatcatttggaggtggatttgctgac
ttcagcacattgtcaaagcctttcccaggcaacgatagccccaaagaaaaagatcctgaa
atattttgtgatccattcacttctgctactaccactaccaataaagaggctgatccaagc
aattttgccaacttcagtgcttatccctctgaagaagatatgatcgaatgggccaagagg
gaaagtgagagagaggaagagcagaggcttgcccgactaaatcagcaggaacaagaagac
ttagaactggctattgcactcagcaaatctgagatatcagaagcatga