GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:12:02

Sequence gi568815576f:32375003_32598527 : 223525 bp : 44.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1680   1719   40  2  1  105  110    70 0.792   9.29
 1.02 Intr +   7288   7394  107  2  2   44   87    27 0.220  -1.87
 1.03 Term +  10454  10633  180  1  0   88   42   125 0.472   5.51
 1.04 PlyA +  11900  11905    6                               1.05

 2.13 PlyA -  12814  12809    6                              -3.24
 2.12 Term -  13097  12990  108  2  0   88   42   120 0.958   5.91
 2.11 Intr -  17357  17238  120  2  0   99  107    70 0.998  10.69
 2.10 Intr -  19000  18890  111  1  0   71   91    78 0.991   6.98
 2.09 Intr -  20212  20024  189  1  0  116   70   155 0.970  16.28
 2.08 Intr -  21287  21072  216  2  0   28   92   218 0.628  14.90
 2.07 Intr -  23098  22994  105  1  0   57   89   153 0.803  12.71
 2.06 Intr -  24757  24601  157  0  1   53   93   129 0.900   9.91
 2.05 Intr -  26901  26745  157  1  1  111   71   121 0.882  11.77
 2.04 Intr -  31759  31660  100  1  1   73  110    96 0.983   9.98
 2.03 Intr -  33240  33173   68  1  2  107   84    74 0.983   7.52
 2.02 Intr -  33831  33753   79  0  1   80  103    66 0.994   6.42
 2.01 Init -  37154  37062   93  2  0  104  110   149 0.989  19.08
 2.00 Prom -  37842  37803   40                              -3.66

 3.09 PlyA -  38492  38487    6                               1.05
 3.08 Term -  49786  49550  237  1  0  -20   49   571 0.684  38.57
 3.07 Intr -  57541  57371  171  1  0   26   88   167 0.872  10.64
 3.06 Intr -  58770  58717   54  0  0   77  114    27 0.140   3.38
 3.05 Intr -  60878  60702  177  2  0  131   78   122 0.096  15.62
 3.04 Intr -  62849  62758   92  0  2   47   88   113 0.103   6.91
 3.03 Intr -  67729  67669   61  1  1   64   96    60 0.565   2.71
 3.02 Intr -  70696  70633   64  0  1   92  101    27 0.776   3.12
 3.01 Init -  71838  71729  110  0  2   70   75    27 0.379  -0.71
 3.00 Prom -  72341  72302   40                              -1.06

 4.00 Prom +  74111  74150   40                              -1.76
 4.01 Init + 100001 100122  122  1  2   97  101   117 0.935  12.29
 4.02 Intr + 103979 104273  295  2  1   70   64   139 0.978   6.71
 4.03 Intr + 108895 109122  228  0  0  124  111    -6 0.905   3.37
 4.04 Intr + 110066 110207  142  1  1  113   46   127 0.940  10.93
 4.05 Intr + 112743 112826   84  1  0  102   58    19 0.489   0.09
 4.06 Intr + 116084 116179   96  0  0   28  116    49 0.648   1.68
 4.07 Intr + 118103 118279  177  0  0  124   45    47 0.840   3.89
 4.08 Intr + 122529 122707  179  1  2   44   70    88 0.547   2.24
 4.09 Term + 130774 131082  309  0  0   84   38   128 0.051   2.46
 4.10 PlyA + 132668 132673    6                               1.05

 5.11 PlyA - 133041 133036    6                               1.05
 5.10 Term - 138822 138690  133  2  1  113   42   135 0.994   8.96
 5.09 Intr - 143332 143041  292  2  1   87  108   106 0.745   8.69
 5.08 Intr - 153003 152916   88  0  1   98   86   -18 0.299  -1.46
 5.07 Intr - 154006 153872  135  1  0  135   86   113 0.998  16.56
 5.06 Intr - 157701 157618   84  0  0   96   75    26 0.573   2.12
 5.05 Intr - 158893 158791  103  0  1  129   78   163 0.971  19.58
 5.04 Intr - 161201 161154   48  1  0   99   56    47 0.559   0.40
 5.03 Intr - 163108 163034   75  0  0   90   94    91 0.996   8.53
 5.02 Intr - 166711 166569  143  1  2   93   84   391 0.995  38.35
 5.01 Init - 178996 178928   69  1  0   72   66   116 0.457   6.93
 5.00 Prom - 187236 187197   40                              -5.76

 6.00 Prom + 188487 188526   40                              -6.36
 6.01 Sngl + 189624 190205  582  2  0   68   41   192 0.170   8.69
 6.02 PlyA + 190372 190377    6                              -0.45

 7.00 Prom + 194033 194072   40                              -3.76
 7.01 Init + 201439 201519   81  0  0   57   63    62 0.125   1.57
 7.02 Term + 207699 207812  114  2  0   53   41   148 0.535   5.17
 7.03 PlyA + 209918 209923    6                               1.05

 8.03 PlyA - 210433 210428    6                               1.05
 8.02 Term - 212804 212718   87  2  0   36   42   106 0.348  -1.54
 8.01 Intr - 221734 221672   63  1  0  127   86    16 0.295   4.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 130280 130232   49  2  1   72  131    36 0.831   7.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_1|108_aa
MAPVLLLLLSHFPASSPTTGYTFKASEILMFKRGICLPMVTETLVTTAKYENEETYRVRT
FQIGTGEKLVKALVPAFLGRTISSYATCLGPSWDFITVPDFMEELFTR

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_1|327_bp
atggctcctgtcctcctgctgctcctctctcacttcccagctagcagtcctaccactggg
tatacctttaaagcaagtgaaatcctcatgttcaaaagaggtatctgccttcccatggtg
actgaaacactagtcacgacagccaagtatgaaaatgaggagacttacagggtgcgaaca
ttccagataggtacaggggagaaactggtgaaggccctggttccagcctttctgggtaga
accatctcctcctatgccacctgtttgggcccctcctgggactttatcaccgtgccagac
ttcatggaggaactgtttaccaggtga

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_2|500_aa
MSRSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDI
NCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQGKLTGLDFVALVPDALVAMEKAMKRDKIIVNDRQLACARIASPEGQD
YLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDG
KERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGT
TCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTC
HDAGISKKAIKLRPIAVIKG

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_2|1503_bp
atgagtcgcagctataatgatgagctgcagttcttggagaagatcaataaaaactgctgg
aggatcaagaagggcttcgtgcccaacatgcaggttgaaggtgttttctatgtgaatgat
gctctggagaaattgatgtttgaggaattaaggaatgcctgtcgaggtggtggtgttggt
ggcttcctgccagccatgaaacagattggcaatgtggcagccctgcctggaattgttcat
cgatctattgggcttcctgatgtccattcaggatatgggtttgctattgggaacatggca
gcctttgatatgaatgaccctgaagcagtagtatccccaggtggtgtcgggtttgacatc
aactgtggtgtccgcttgctaagaaccaatttagatgaaagtgatgtccagcctgtgaag
gagcaacttgcccaagctatgtttgaccacattcctgttggggtggggtcaaaaggtgtc
atcccaatgaatgccaaagacttggaggaggccttggagatgggggtggactggtcctta
agagaagggtatgcctgggctgaagacaaggagcactgcgaggagtacggaaggatgctg
caggctgaccccaataaagtttctgcaagggcgaagaaaagaggccttcctcagttgggg
accctgggagcaggcaaccattatgcagaaatccaggttgtggatgagattttcaatgag
tatgctgctaaaaaaatgggcatcgaccataagggacagggaaagctaactggtttggac
tttgtggctcttgttccagatgcgctggtagctatggagaaggccatgaagagagacaag
attatagtcaatgatcggcagttggcttgtgctcgaatcgcttccccagagggtcaagac
tatctgaagggaatggcagctgctgggaactatgcctgggtcaaccgctcttccatgacc
ttcttaacccgtcaggctttcgccaaggtcttcaacacaacccctgatgacttggaccta
catgtgatctatgatgtttctcacaacattgccaaagtggagcagcatgtggtggacgga
aaggaacggacactgttagtacacaggaagggatccacccgcgctttccctcctcaccat
cccctcattgctgttgattaccaactcactggacagccagtgctcattggtggcaccatg
ggaacctgtagttatgttcttactggcactgaacagggcatgactgagacctttggaaca
acctgtcatggagcgggccgtgcattgtcccgagcaaaatctcgacgtaatttagatttc
caggatgtcttagacaaattggcagatatgggaattgcgatccgtgttgcctcacccaaa
ctggttatggaagaggctcctgagtcctataagaatgtgacagatgtggtaaatacctgc
catgatgctggaatcagcaagaaagccattaaactgagaccaattgctgtgatcaaagga
tag

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_3|321_aa
MESFSLTQRLKNGSQLKPEPNWKAFAPSCRRRKSDSSVLYNSFAEPMEKPILKNLNEMLC
PIIASEVKALNANLSTLEVLTKIDNYTLLDYSLISSPEITENYLDLNLKGVFYPLENLTD
PPFSPVPFVLPERSNSMLYIGIAEYFFKSASFAHFTAGVFNVTLSTEEISNHFVQNSQGL
GNVLSRIAEIYILSQPFMVRIMATEPPIINLQPGNFTLDIPASIMMLTQPKNSTVETIVS
MDFEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKRRRR
RRRRRRRRRRRRRRKKITLKI

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_3|966_bp
atggagtctttctccctcacacagaggttgaagaatggtagtcagcttaagcctgagccc
aactggaaggcctttgcaccctcgtgtagaaggaggaaatcagattcaagtgttctgtat
aactcctttgctgagcccatggagaaacccattttaaagaacttaaatgaaatgctctgt
cccattattgcaagtgaagtcaaagcgctaaatgccaacctcagcacactggaggtttta
accaagattgacaactacactctgctggattactccctaatcagttctccagaaattact
gagaactaccttgacctgaacttgaagggtgtattctacccactggaaaacctcaccgac
ccccccttctcaccagttccttttgtgctcccagaacgcagcaactccatgctctacatt
ggaatcgccgagtatttctttaaatctgcgtcctttgctcatttcacagctggggttttc
aatgtcactctctccaccgaagagatttccaaccattttgttcaaaactctcaaggcctt
ggcaacgtgctctcccggattgcagagatctacatcttgtcccagcccttcatggtgagg
atcatggccacagagcctcccataatcaatctacaaccaggcaatttcaccctggacatc
cctgcctccatcatgatgctcacccaacccaagaactccacagttgaaaccatcgtttcc
atggacttcgaagaagaagaagaagaagaagaagaagaagaagaggaagaagaagaggaa
gaagaagaggaagaagaagaggaagaagaagaggaagaagaagaggaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagagaagaagaagaagaggaggaggagg
aggaggaggaggaggagaagaagaagaagaagaagaagaagaaagaaaataacacttaag
atttag

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_4|543_aa
MRLRVRLLKRTWPLEVPETEPTLGHLRSHLRQSLLCTWGYSSNTRFTITLNYKDPLTGDE
ETLASYGIVSGDLICLILQDDIPAPNIPSSTDSEHSSLQNNEQPSLATSSNQTSMQDEQP
SDSFQGQAAQSGVWNDDSMLGPSQNFEAESIQDNAHMAEGTGFYPSEPMLCSESVEGQVP
HSLETLYQSADCSDANDALIVLIHLLMLESGYIPQGTEAKALSMPEKWKLSGVYKLQYMH
PLCEGSSATLTCVPLGNLIVVNATLKINNEIRSVKRLQLLPESFICKEKLGENVANIYKD
LQKLSRLFKDQLVYPLLAFTRQALNLPDVFGLVVLPLELKLRIFRLLDVRSVLSLSAVCR
DLFTASNDPLLWRFLYLRDFRVVSWNGIYSWTTKDFEYYINLVDKTEARFEKVDSDFESF
TVGKMPSNSIACTEKSFMKGRHALKGLKPVITRLLQHGLLKPINSPYNSPILPVLKPDKP
YKLVQDLHRINQIVLPIPPVGPNPYTLLSSIPPSTTHYSVLDRKDAFFTIPLHPSSQPLF
AFT

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_4|1632_bp
atgaggctgcgggtgcggcttctgaagcggacctggccgctggaggtgcccgagacggag
ccgacgctggggcatttgcgctcgcacctgaggcagtccctgctgtgcacctgggggtac
agttctaatacccgatttacaattacattgaactacaaggatcccctcactggagatgaa
gagaccttggcttcatatgggattgtttctggggacttgatatgtttgattcttcaagat
gacattccagcgcctaatataccttcatccacagattcagagcattcttcactccagaat
aatgagcaaccctctttggccaccagctccaatcagactagcatgcaggatgaacaacca
agtgattcattccaaggacaggcagcccagtctggtgtttggaatgacgacagtatgtta
gggcctagtcaaaattttgaagctgagtcaattcaagataatgcgcatatggcagagggc
acaggtttctatccctcagaacccatgctctgtagtgaatcggtggaagggcaagtgcca
cattcattagagaccttgtatcaatcagctgactgttctgatgccaatgatgccttgata
gtgttgatacatcttctcatgttggagtcaggttacatacctcagggcaccgaagccaaa
gcactgtccatgccggagaagtggaagttgagcggggtgtataagctgcagtacatgcat
cctctctgcgagggcagctccgctactctcacctgtgtgcctttgggaaacctgattgtt
gtaaatgctacactaaaaatcaacaatgagattagaagtgtgaaaagattgcagctgcta
ccagaatcttttatttgcaaagagaaactaggggaaaatgtagccaacatatacaaagat
cttcagaaactctctcgcctctttaaagaccagctggtgtatcctcttctggcttttacc
cgacaagcactgaacctaccagatgtatttgggttggtcgtcctcccattggaactgaaa
ctacggatcttccgacttctggatgttcgttccgtcttgtctttgtctgcggtttgtcgt
gacctctttactgcttcaaatgacccactcctgtggaggtttttatatctgcgtgatttt
cgagtggtttcttggaatggaatctattcctggacaacaaaggatttcgaatattacata
aatttagttgacaaaacagaagcaaggtttgagaaggttgactctgattttgaaagtttt
actgtgggtaaaatgccatcaaacagcatcgcatgtacagagaaatctttcatgaaagga
agacacgctttaaaaggattaaagcctgttatcactcgcctgctacagcatggcctttta
aagcctataaactctccttacaattcccctattttacctgtcctaaaaccagacaagcct
tacaagttagttcaggatctgcaccgtatcaaccaaattgttttgcctatcccccctgtg
gggcccaacccgtacactcttttgtcctcaatacctccctccacaactcactattccgtg
cttgatcgtaaagatgctttcttcactattcccctgcacccctcgtcccagcctctcttt
gctttcacttag

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_5|389_aa
MMVWTVVVAVEVAMSLLQLLLPHIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRI
QKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERCSRDSRGHLLYGPSGMYRLWVDSC
SEMFGGLDICAVKAVHSKDGRDYIIEGPTAKQDQVTQWVGAQSCQEGVHTQALEVMDSSM
PLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ
PQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRAS
SGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDT
SQRGTPSEDEAKAETIRNLRKSFASLFSD

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_5|1170_bp
atgatggtgtggaccgtggtggtggcagtggaggtggcaatgtctctccttcagctgctg
ctcccccatatcaaagtggaaaaccagcttgacttccaggacatcaccagcgtggtcgcc
atggccaaaacctacgccaccaccgaggccttcatcgactccaagtacgacatccgcatc
cagaaaattggatccaactacaaggcttacatgagaacctccatctctgggaactggaag
gccaacacaggctctgccatgctggagcaggtggccatgacagagaggtgttcacgggac
agtcgtggccatcttctctatggcccttccggaatgtacaggctgtgggtggacagctgc
tcggaaatgtttggcggcctggacatctgtgccgtcaaggctgtccacagcaaggatggc
agagattacatcatcgaggggcccacggccaagcaggaccaggtgactcagtgggtggga
gcccagtcatgccaggagggtgttcacacccaggccttggaggtaatggacagctcaatg
ccgctgattggagagcatgtggaagaggacagacagctgatggccgaccttgttgtctcc
aaaatgagccagctcccgatgccaggaggcacagcgccctcccccctcagaccttgggct
ccacagattaaatcagcgaaatccccagggcaagcccagctggggcctcagctaggccag
ccccagccacgcccacctccgcaaggaggccctcgccaagctcagtctcctcagccccag
agatctggaagcccctcccaacagaggctctccccacaaggccagcagcccctgagcccc
cagtccggatctccacagcagcaaaggtcaccaggctctccgcagctatcccgggcatcc
agtggcagctccccaaaccaggcctccaagccaggtgccaccctcgcctcacagccccgg
ccccctgtgcagggccgtagtacctcccagcagggtgaagagtccaagaagccagcacca
ccccatccgcatctcaacaaatctcagtccctgactaacagcctcagcacatccgacacc
tcccagcgtgggaccccaagtgaagacgaggccaaggctgaaaccatccgcaacctgagg
aagtcttttgccagcctgttctctgactaa

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_6|193_aa
MHPNGAPGLYTNSAPRLHPKSALGLHPNSAPGLHPNSAPGLHPVLPHCTQTVLLGCTQTV
LPHCTQTVLPDYTQTVLPDCTLTALPDCTLTVLPDYTQTVLPDCTQTVLLDCTQTVLLDC
TQTVLPDCTQTVLPDCTQTVISDCTQTVLPDCTQTVLPDCTQTVLPDCTQTVLLGCTQTV
LSDCTQTVLSDCT

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_6|582_bp
atgcacccaaacggtgctcccggactgtacacaaacagtgctcccagactgcacccaaag
agtgctctcggactgcacccaaacagtgctcccggactgcacccaaacagtgctcctggg
ctgcacccagtgctcccgcattgtacccaaacagtgctcctgggctgcacccaaacagtg
ctcccgcattgtacccaaacagtgctcccggactacacccaaacagtgctcccggactgc
accctaacagcgctcccggactgcaccctaacagtgctcccggattacacccaaacagtg
ctcccggattgtacccaaacagtgctcctggactgcacccaaacagtgctcctggactgc
acccaaacagtgctcccggactgcacccaaacagtgctcccggactgcacccaaacagtg
atctcagactgcacccaaacagtgctccctgactgtacacaaacagtgctcccggactgc
acccagacagtgctcccggactgcacccaaacagtgctcctgggctgcacccaaacagtg
ctctcggactgcacccaaacagtgctctcggactgcacctaa

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_7|64_aa
MNYEAQGLAPSMRSINTRFMMVTIFRKGLPGDTDAASTSIGHTEQQGYRRAQDRLTSGPI
AQII

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_7|195_bp
atgaactacgaagcacagggcctggcacctagtatgcggtcaataaatacacggtttatg
atggtgactattttccgtaaggggctcccaggtgatacggatgctgccagtacttccata
gggcacactgagcagcaaggctaccgaagagctcaggaccgtctgacttcagggcccatt
gcccagatcatctga

>gi568815576f:32375003_32598527|GENSCAN_predicted_peptide_8|49_aa
VTAPHFPVVVKLGHAHAGMGKTPLSVPGDERAAPPGDVSSSASILHTLA

>gi568815576f:32375003_32598527|GENSCAN_predicted_CDS_8|150_bp
gtcacagccccacacttcccggtggtagtcaagctgggacatgcccacgctggaatggga
aagacacccctgtctgttccgggtgatgagagggccgctcctccaggcgatgtttccagc
agcgccagcatcttgcacacgctggcttag