GENSCAN 1.0	Date run:  3-Nov-116	Time: 16:32:48

Sequence gi568815593r:134097775_134325861 : 228087 bp : 44.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16412  16579  168  1  0   77  103   107 0.813   8.88
 1.02 Intr +  17103  17381  279  2  0   42   83   527 0.854  45.27
 1.03 Intr +  17547  17613   67  2  1  120  113    50 0.873   9.18
 1.04 Intr +  18135  18259  125  1  2   80  119   140 0.740  16.60
 1.05 Intr +  24607  24698   92  0  2   73   89    25 0.091  -0.11
 1.06 Intr +  24938  25082  145  2  1   43   75    75 0.354   1.98
 1.07 Intr +  32030  32126   97  1  1   79   94    -3 0.349  -1.02
 1.08 Intr +  34746  34966  221  1  2  121   33    76 0.503   3.42
 1.09 Intr +  40285  40390  106  0  1  102   82    54 0.583   5.99
 1.10 Intr +  41177  41264   88  0  1  113  105     8 0.961   4.03
 1.11 Intr +  44411  44530  120  2  0  120   76   115 0.994  13.11
 1.12 Intr +  44947  45109  163  1  1   80   76   299 0.999  27.88
 1.13 Intr +  45219  45326  108  2  0  119   83   174 0.964  20.48
 1.14 Intr +  45818  45866   49  1  1  129   94    53 0.938   8.25
 1.15 Intr +  48596  48711  116  0  2  114   92     1 0.329   3.27
 1.16 Intr +  52636  52697   62  0  2   22   74    53 0.161  -5.17
 1.17 Term +  53971  54154  184  1  1   79   44   106 0.464   2.32
 1.18 PlyA +  54409  54414    6                               1.05

 2.15 PlyA -  55081  55076    6                               1.05
 2.14 Term -  59994  59959   36  0  0   85   44    54 0.902  -1.96
 2.13 Intr -  60821  60681  141  2  0   50   96   212 0.994  18.75
 2.12 Intr -  63356  63213  144  2  0   42  119   144 0.971  13.38
 2.11 Intr -  69469  69396   74  2  2   29  116    64 0.401   2.43
 2.10 Intr -  76248  76152   97  0  1  101  115    67 0.857  10.28
 2.09 Intr -  83453  83394   60  2  0   82  108     4 0.171   0.73
 2.08 Intr -  88595  88511   85  1  1   88   58    16 0.008  -1.58
 2.07 Intr - 101430 101312  119  0  2  108   78    46 0.876   4.86
 2.06 Intr - 104247 104074  174  0  0   82   91    78 0.994   7.64
 2.05 Intr - 108357 108148  210  0  0   89   86    72 0.941   6.21
 2.04 Intr - 128121 127923  199  2  1  -35   50   451 0.080  28.35
 2.03 Intr - 128295 128148  148  1  1   81    7   250 0.808  15.49
 2.02 Intr - 178311 178200  112  0  1   67   68    78 0.386   3.65
 2.01 Init - 182642 182640    3  2  0  113   81     0 0.345   1.80
 2.00 Prom - 184082 184043   40                              -4.86

 3.07 PlyA - 185593 185588    6                               1.05
 3.06 Term - 188785 188599  187  0  1   93   44   133 0.191   6.36
 3.05 Intr - 210692 210364  329  2  2   66   83   194 0.615  11.20
 3.04 Intr - 210953 210800  154  1  1   45  116    46 0.598   3.17
 3.03 Intr - 214606 214518   89  1  2  106   80    14 0.526   1.17
 3.02 Intr - 221723 221584  140  0  2  129   50    -4 0.469   0.08
 3.01 Intr - 224129 224017  113  1  2   76   69    60 0.433   2.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100070  99998   73  1  1   73   39    73 0.809  -1.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:134097775_134325861|GENSCAN_predicted_peptide_1|729_aa
MEDGARAATAPRSSNAAGSLGYEHSLKQPQALGSPQFKAQGALEPGHDTVHTTAAMRPAP
RRAERTMPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSS
LVNESEGAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTS
GMYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLALPGSTKPVSTAAHGNIHTSTATSSAT
LRLNHTVTPLTPCDWCFLLLCTNKALVEETGVLSGHRGPHPQWYSAQILLLQAPLSDVKA
RRWVDWPHAPSRALCNCGNSLVPAGLRPEETATFFAGKVLWGSSIWGFSESTVRGEGVSL
LAVARAVSVHTACEQTAAVYRENADCVYFSPEPAGSWGHKANQPPHGVPQLSLYEHFNSP
HPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPA
AIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIA
ECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRS
REKHQESTTELLTSPAEPAPTSPGLSTALSLPTPGPPQAPRSTLQSTQRGRKGISSCIRF
SENSTEQKGMLLNTGTQTRGSQQYTRLQGNKYIINELAIYHSNYVPHWKCVKQEHLRQHF
SATTNDHLH

>gi568815593r:134097775_134325861|GENSCAN_predicted_CDS_1|2190_bp
atggaggatggggcaagagccgcaacagcgccgcggagttccaacgctgccggttccctg
gggtacgagcacagcctcaagcagcctcaagccctaggaagcccccagttcaaagcacag
ggcgcattggagcctgggcacgatacagttcacaccacggctgcgatgcgccccgcgccc
cggcgggcggagcgcaccatgccgcagctggactccggcgggggcggcgcgggcggcggc
gacgacctcggcgcgccggacgagctgctggccttccaggatgaaggcgaggagcaggac
gacaagagccgcgacagcgccgccggtcccgagcgcgacctggccgagctcaagtcgtcg
ctcgtgaacgagtccgagggcgcggccggcggcgcagggatcccgggggtcccgggggcc
ggcgccggggcccgcggcgaggccgaggctctcgggcgggaacacgctgcgcagagactc
ttcccggacaaacttccagagcccctggaggacggcctgaaggccccggagtgcaccagc
ggcatgtacaaagagaccgtctactccgccttcaatctgctcatgcattacccacccccc
tcgggagcagggcagcacccccagccgcagcccccgctggctctaccaggttccaccaag
ccagtttccacggcagcacacgggaatattcataccagcactgccacctcctcagctact
ctgagactcaaccatacagtcacacccctcacaccttgtgactggtgcttcctgctgctg
tgtacaaacaaggctctggtggaggaaacaggtgttttatcaggtcacaggggcccccac
ccccaatggtacagtgcacagatcctcctgctgcaggcccctttatctgatgtcaaggcc
aggcggtgggtggactggccacacgcacctagcagagctctgtgcaactgtggcaacagc
cttgtgccagcaggcttgaggccagaggaaacagcaactttcttcgctgggaaagtgttg
tggggctcaagcatttgggggttttcagagtcaaccgtcagaggcgagggagtttctctg
ctggcggtggcaagggctgtcagcgtgcacacagcctgcgagcagaccgctgcggtctac
agggaaaatgccgactgtgtttatttttcacctgagcctgcaggaagttgggggcacaag
gccaatcagcccccccacggtgtcccccaactctctctctacgaacatttcaacagccca
catcccacccctgcacctgcggacatcagccagaagcaagttcacaggcctctgcagacc
cctgacctctctggcttctactccctgacctcaggcagcatggggcagctcccccacact
gtgagctggttcacccacccatccttgatgctaggttctggtgtacctggtcacccagca
gccatcccccacccggccattgtgcccccctcagggaagcaggagctgcagcccttcgac
cgcaacctgaagacacaagcagagtccaaggcagagaaggaggccaagaagccaaccatc
aagaagcccctcaatgccttcatgctgtacatgaaggagatgagagccaaggtcattgca
gagtgcacacttaaggagagcgctgccatcaaccagatcctgggccgcaggtggcacgcg
ctgtcgcgagaagagcaggccaagtactatgagctggcccgcaaggagaggcagctgcac
atgcagctatacccaggctggtcagcgcgggacaactacgggaagaagaagaggcggtcg
agggaaaagcaccaagaatccaccacagaactgcttactagccctgcggagccggcacct
acatccccaggtctctccactgctctcagcctcccaaccccagggcccccacaggccccc
cgcagcaccctgcagagcacacagagaggaagaaagggaatcagttcctgcatccgtttc
tcagaaaacagcacagaacagaagggaatgctgctcaatactggcacacagaccagaggt
agccagcagtacacaagactgcaaggcaacaagtacattatcaatgaattagccatctat
cactcaaactatgtcccgcattggaagtgtgtcaagcaagagcaccttcgacaacacttt
tcggccaccactaatgatcatctccactga

>gi568815593r:134097775_134325861|GENSCAN_predicted_peptide_2|533_aa
MWDNQKLKALEQLMAKPDGFVVSSYKELLMYCSGRADTQSRALEPQRAEEEAQRPTAEYC
GESQRASASLNSRQKYTRNRRRRVRVGPAERQPAGAGGIMDEKVFTKELDQWIEQLNECK
QLSESQVKSLCEKVSCSTAADSRRGAEPAEEKAAAKEILTKESNVQEVRCPVTVCGDVHG
QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQGYNWCHDRNVVTIFSAPN
YCYRCGNQAAIMELDDTLKYSLLLCQFFPSSKYGNDPRLSTHTTFSLLFQRLFPFDSRNI
IWPLPGKFSQMPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNV
NAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYL
DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK

>gi568815593r:134097775_134325861|GENSCAN_predicted_CDS_2|1602_bp
atgtgggataatcagaaactgaaagctcttgagcagttaatggctaagccagatggtttc
gtggtatcatcttacaaagagctccttatgtactgcagtggaagagcagacacacagagc
cgagctctggagcctcagcgagcggaggaggaggcgcagcggccgacggccgagtactgc
ggtgagagccagcgggccagcgccagcctcaacagccgccagaagtacacgaggaaccgg
cggcggcgtgtgcgtgtaggccccgcggagcggcagccggctggggcgggtggcatcatg
gacgagaaggtgttcaccaaggagctggaccagtggatcgagcagctgaacgagtgcaag
cagctgtccgagtcccaggtcaagagcctctgcgagaaggtgagctgtagtacggctgcg
gacagccgccgcggggccgagcccgccgaggaaaaggcggccgctaaagaaatcctgaca
aaagaatccaacgtgcaagaggttcgatgtccagttactgtctgtggagatgtgcatggg
caatttcatgatctcatggaactgtttagaattggtggcaaatcaccagatacaaattac
ttgtttatgggagattatgttgacagaggatattattcagttgaaacagttacactgctt
gtagctcttaaggttcgttaccgtgaacgcatcaccattcttcgagggaatcatgagagc
agacagatcacacaagtttatggtttctatgatgaatgtttaagaaaatatggaaatgca
aatgtttggaaatattttacagatctttttgactatcttcctctcactgccttggtggat
gggcagggatataactggtgccatgaccggaatgtagtaacgattttcagtgctccaaac
tattgttatcgttgtggtaaccaagctgcaatcatggaacttgacgatactctaaaatac
tctttactcctttgccagttcttcccatcctctaaatatggaaatgacccaaggcttagt
actcacacgactttttctctcctcttccagcgcttatttccatttgacagcagaaatata
atctggccacttcctggcaaattcagtcaaatgccttcaattaagttgcagagttctgat
ggagagatatttgaagttgatgtggaaattgccaaacaatctgtgactattaagaccatg
ttggaagatttgggaatggatgatgaaggagatgatgacccagttcctctaccaaatgtg
aatgcagcaatattaaaaaaggtcattcagtggtgcacccaccacaaggatgaccctcct
cctcctgaagatgatgagaacaaagaaaagcgaacagatgatatccctgtttgggaccaa
gaattcctgaaagttgaccaaggaacactttttgaactcattctggctgcaaactactta
gacatcaaaggtttgcttgatgttacatgcaagactgttgccaatatgatcaaggggaaa
actcctgaggagattcgcaagaccttcaatatcaaaaatgactttactgaagaggaggaa
gcccaggtacgcaaagagaaccagtggtgtgaagagaagtga

>gi568815593r:134097775_134325861|GENSCAN_predicted_peptide_3|337_aa
XPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVL
PQVQHPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPEL
KAKLLQEAKVNSLIKPKESSKENELRKDERKTVYTNTLLSSSVLGKEIEKEKKPKEIKVR
VIKVKGGRGDISEPKKKEYEGGLGQQDANENVHPMSPDTKLVTIEPPNPINPSTNCNGLK
ENPHCGGSVTMPPINLTNSNLMAANLSSNLFHPSVRYVFISGMKTDQYSELVPVEWGIAE
KIPKNVEATLELGNRQRFEQFGELRRRQENVGKFGTF

>gi568815593r:134097775_134325861|GENSCAN_predicted_CDS_3|1014_bp
nnacctgtggatatctgggctttgggctgtatgatcattgagatggccactggaaatccc
tatcttcctagtagttctgatttggatttactccataaaattgttttgaaagtgggcaat
ttgtcacctcacttgcagaatatcttttccaagagccccatttttgctggggtagttctt
cctcaagttcaacaccccaaaaatgcaagaaaaaaatatccaaagcttaatggattgttg
gcagatatagttcatgcttgtttacaaattgatcctgctgacaggatatcatctagtgat
cttttgcatcatgagtattttactagagatggatttattgaaaaattcatgccagaactg
aaagctaaattactgcaggaagcaaaagtcaattcattaataaagccaaaagagagttct
aaagaaaatgaactcaggaaagatgaaagaaaaacagtttataccaatacactgctaagt
agttcagttttgggaaaggaaatagaaaaagagaaaaagcccaaggagatcaaagtcaga
gttattaaagtcaaaggaggaagaggagatatctcagaaccaaaaaagaaagagtatgaa
ggtggacttggtcaacaggatgcaaatgaaaatgttcatcctatgtctccagatacaaaa
cttgtaaccattgaaccaccaaaccctatcaatcccagcactaactgtaatggcttgaaa
gaaaatccacattgcggaggttctgtgacaatgccacccatcaatctaactaacagtaat
ttgatggctgcaaatctcagttcaaatctctttcaccccagtgtgaggtacgtctttatc
agcggcatgaagacagaccaatacagtgaattggtaccagtagagtggggcattgctgaa
aagatacccaaaaatgtggaagcaactttggaactgggtaacaggcagaggtttgaacag
tttggagagctcagaagaagacaggaaaatgtgggaaagtttggaactttctag