Result of FASTA (omim) for pF1KB5205
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5205, 543 aa
  1>>>pF1KB5205 543 - 543 aa - 543 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1992+/-0.000483; mu= 19.1557+/- 0.030
 mean_var=69.0806+/-14.127, 0's: 0 Z-trim(107.9): 61  B-trim: 29 in 1/50
 Lambda= 0.154311
 statistics sampled from 15963 (16016) to 15963 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.533), E-opt: 0.2 (0.188), width:  16
 Scan time:  9.500

The best scores are:                                      opt bits E(85289)
NP_006420 (OMIM: 605140) T-complex protein 1 subun ( 543) 3495 787.9       0
NP_001159757 (OMIM: 605140) T-complex protein 1 su ( 499) 3213 725.1 1.2e-208
XP_011530780 (OMIM: 605140) PREDICTED: T-complex p ( 499) 3213 725.1 1.2e-208
XP_011530781 (OMIM: 605140) PREDICTED: T-complex p ( 499) 3213 725.1 1.2e-208
NP_001159756 (OMIM: 605140) T-complex protein 1 su ( 456) 2937 663.7 3.5e-190
NP_001009570 (OMIM: 605140) T-complex protein 1 su ( 339) 2226 505.3 1.2e-142
NP_006422 (OMIM: 605139) T-complex protein 1 subun ( 535) 1012 235.2   4e-61
NP_006421 (OMIM: 605142) T-complex protein 1 subun ( 539) 1005 233.6 1.2e-60
NP_005989 (OMIM: 600114) T-complex protein 1 subun ( 545)  987 229.6 1.9e-59
NP_001185771 (OMIM: 605139) T-complex protein 1 su ( 488)  934 217.8 6.3e-56
NP_110379 (OMIM: 186980) T-complex protein 1 subun ( 556)  903 210.9 8.4e-54
NP_036205 (OMIM: 256840,610150) T-complex protein  ( 541)  895 209.1 2.8e-53
NP_001293082 (OMIM: 256840,610150) T-complex prote ( 520)  883 206.4 1.7e-52
NP_001293085 (OMIM: 256840,610150) T-complex prote ( 503)  866 202.6 2.3e-51
NP_001008800 (OMIM: 600114) T-complex protein 1 su ( 507)  832 195.1 4.5e-49
NP_001243650 (OMIM: 605142) T-complex protein 1 su ( 509)  762 179.5 2.2e-44
NP_001753 (OMIM: 104613) T-complex protein 1 subun ( 531)  716 169.3 2.8e-41
NP_006575 (OMIM: 610730) T-complex protein 1 subun ( 530)  675 160.1 1.5e-38
NP_001293083 (OMIM: 256840,610150) T-complex prote ( 486)  599 143.2 1.8e-33
NP_001293084 (OMIM: 256840,610150) T-complex prote ( 448)  595 142.3 3.1e-33
NP_001008897 (OMIM: 186980) T-complex protein 1 su ( 401)  580 138.9 2.9e-32
XP_016879512 (OMIM: 610730) PREDICTED: T-complex p ( 464)  566 135.8 2.8e-31
NP_001009186 (OMIM: 104613) T-complex protein 1 su ( 486)  481 116.9 1.4e-25
NP_001180459 (OMIM: 610730) T-complex protein 1 su ( 485)  446 109.1 3.2e-23
XP_016879513 (OMIM: 610730) PREDICTED: T-complex p ( 351)  404 99.7 1.6e-20
XP_011522505 (OMIM: 610730) PREDICTED: T-complex p ( 388)  404 99.7 1.7e-20
NP_001180458 (OMIM: 610730) T-complex protein 1 su ( 493)  404 99.8 2.1e-20
NP_955472 (OMIM: 118190,605280,612233) 60 kDa heat ( 573)  198 54.0 1.5e-06
NP_002147 (OMIM: 118190,605280,612233) 60 kDa heat ( 573)  198 54.0 1.5e-06
XP_011509094 (OMIM: 121850,609414) PREDICTED: 1-ph (1340)  194 53.3 5.6e-06
XP_011509092 (OMIM: 121850,609414) PREDICTED: 1-ph (1779)  194 53.4   7e-06
XP_016859061 (OMIM: 121850,609414) PREDICTED: 1-ph (1779)  194 53.4   7e-06
XP_016859062 (OMIM: 121850,609414) PREDICTED: 1-ph (1779)  194 53.4   7e-06
XP_016859063 (OMIM: 121850,609414) PREDICTED: 1-ph (1779)  194 53.4   7e-06
XP_011509091 (OMIM: 121850,609414) PREDICTED: 1-ph (1951)  194 53.4 7.5e-06
XP_011509090 (OMIM: 121850,609414) PREDICTED: 1-ph (2001)  194 53.4 7.7e-06
XP_011509089 (OMIM: 121850,609414) PREDICTED: 1-ph (2012)  194 53.4 7.7e-06
XP_011509088 (OMIM: 121850,609414) PREDICTED: 1-ph (2013)  194 53.4 7.7e-06
XP_011509084 (OMIM: 121850,609414) PREDICTED: 1-ph (2055)  194 53.4 7.8e-06
XP_016859057 (OMIM: 121850,609414) PREDICTED: 1-ph (2092)  194 53.4   8e-06
NP_055855 (OMIM: 121850,609414) 1-phosphatidylinos (2098)  194 53.4   8e-06
XP_011509083 (OMIM: 121850,609414) PREDICTED: 1-ph (2104)  194 53.4   8e-06
XP_011509082 (OMIM: 121850,609414) PREDICTED: 1-ph (2109)  194 53.4   8e-06
XP_011509081 (OMIM: 121850,609414) PREDICTED: 1-ph (2110)  194 53.4   8e-06
XP_011509080 (OMIM: 121850,609414) PREDICTED: 1-ph (2110)  194 53.4   8e-06
XP_016859060 (OMIM: 121850,609414) PREDICTED: 1-ph (1895)  193 53.2 8.6e-06
XP_016859059 (OMIM: 121850,609414) PREDICTED: 1-ph (1945)  193 53.2 8.8e-06
XP_011509086 (OMIM: 121850,609414) PREDICTED: 1-ph (2053)  193 53.2 9.1e-06
XP_011509085 (OMIM: 121850,609414) PREDICTED: 1-ph (2054)  193 53.2 9.1e-06
XP_016859058 (OMIM: 121850,609414) PREDICTED: 1-ph (2036)  189 52.3 1.7e-05


>>NP_006420 (OMIM: 605140) T-complex protein 1 subunit e  (543 aa)
 initn: 3495 init1: 3495 opt: 3495  Z-score: 4205.6  bits: 787.9 E(85289):    0
Smith-Waterman score: 3495; 100.0% identity (100.0% similar) in 543 aa overlap (1-543:1-543)

               10        20        30        40        50        60
pF1KB5 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDIN
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 NEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRG
              490       500       510       520       530       540

          
pF1KB5 RPH
       :::
NP_006 RPH
          

>>NP_001159757 (OMIM: 605140) T-complex protein 1 subuni  (499 aa)
 initn: 3213 init1: 3213 opt: 3213  Z-score: 3866.9  bits: 725.1 E(85289): 1.2e-208
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 499 aa overlap (45-543:1-499)

           20        30        40        50        60        70    
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP
                                     ::::::::::::::::::::::::::::::
NP_001                               MDKLIVDGRGKATISNDGATILKLLDVVHP
                                             10        20        30

           80        90       100       110       120       130    
pF1KB5 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
               40        50        60        70        80        90

          140       150       160       170       180       190    
pF1KB5 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
              100       110       120       130       140       150

          200       210       220       230       240       250    
pF1KB5 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
              160       170       180       190       200       210

          260       270       280       290       300       310    
pF1KB5 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
              220       230       240       250       260       270

          320       330       340       350       360       370    
pF1KB5 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
              280       290       300       310       320       330

          380       390       400       410       420       430    
pF1KB5 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
              340       350       360       370       380       390

          440       450       460       470       480       490    
pF1KB5 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
              400       410       420       430       440       450

          500       510       520       530       540   
pF1KB5 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
       :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
              460       470       480       490         

>>XP_011530780 (OMIM: 605140) PREDICTED: T-complex prote  (499 aa)
 initn: 3213 init1: 3213 opt: 3213  Z-score: 3866.9  bits: 725.1 E(85289): 1.2e-208
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 499 aa overlap (45-543:1-499)

           20        30        40        50        60        70    
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP
                                     ::::::::::::::::::::::::::::::
XP_011                               MDKLIVDGRGKATISNDGATILKLLDVVHP
                                             10        20        30

           80        90       100       110       120       130    
pF1KB5 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
               40        50        60        70        80        90

          140       150       160       170       180       190    
pF1KB5 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
              100       110       120       130       140       150

          200       210       220       230       240       250    
pF1KB5 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
              160       170       180       190       200       210

          260       270       280       290       300       310    
pF1KB5 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
              220       230       240       250       260       270

          320       330       340       350       360       370    
pF1KB5 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
              280       290       300       310       320       330

          380       390       400       410       420       430    
pF1KB5 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
              340       350       360       370       380       390

          440       450       460       470       480       490    
pF1KB5 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
              400       410       420       430       440       450

          500       510       520       530       540   
pF1KB5 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
       :::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
              460       470       480       490         

>>XP_011530781 (OMIM: 605140) PREDICTED: T-complex prote  (499 aa)
 initn: 3213 init1: 3213 opt: 3213  Z-score: 3866.9  bits: 725.1 E(85289): 1.2e-208
Smith-Waterman score: 3213; 100.0% identity (100.0% similar) in 499 aa overlap (45-543:1-499)

           20        30        40        50        60        70    
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP
                                     ::::::::::::::::::::::::::::::
XP_011                               MDKLIVDGRGKATISNDGATILKLLDVVHP
                                             10        20        30

           80        90       100       110       120       130    
pF1KB5 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN
               40        50        60        70        80        90

          140       150       160       170       180       190    
pF1KB5 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKM
              100       110       120       130       140       150

          200       210       220       230       240       250    
pF1KB5 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAE
              160       170       180       190       200       210

          260       270       280       290       300       310    
pF1KB5 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRV
              220       230       240       250       260       270

          320       330       340       350       360       370    
pF1KB5 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFIL
              280       290       300       310       320       330

          380       390       400       410       420       430    
pF1KB5 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLL
              340       350       360       370       380       390

          440       450       460       470       480       490    
pF1KB5 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWE
              400       410       420       430       440       450

          500       510       520       530       540   
pF1KB5 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
       :::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH
              460       470       480       490         

>>NP_001159756 (OMIM: 605140) T-complex protein 1 subuni  (456 aa)
 initn: 2937 init1: 2937 opt: 2937  Z-score: 3535.4  bits: 663.7 E(85289): 3.5e-190
Smith-Waterman score: 2937; 100.0% identity (100.0% similar) in 454 aa overlap (90-543:3-456)

      60        70        80        90       100       110         
pF1KB5 NDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQ
                                     ::::::::::::::::::::::::::::::
NP_001                             MMVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQ
                                           10        20        30  

     120       130       140       150       160       170         
pF1KB5 IIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMV
             40        50        60        70        80        90  

     180       190       200       210       220       230         
pF1KB5 VDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIAL
            100       110       120       130       140       150  

     240       250       260       270       280       290         
pF1KB5 LNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVA
            160       170       180       190       200       210  

     300       310       320       330       340       350         
pF1KB5 TQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYN
            220       230       240       250       260       270  

     360       370       380       390       400       410         
pF1KB5 FFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKY
            280       290       300       310       320       330  

     420       430       440       450       460       470         
pF1KB5 LRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDI
            340       350       360       370       380       390  

     480       490       500       510       520       530         
pF1KB5 NNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGR
            400       410       420       430       440       450  

     540   
pF1KB5 GRPH
       ::::
NP_001 GRPH
           

>>NP_001009570 (OMIM: 605140) T-complex protein 1 subuni  (339 aa)
 initn: 2226 init1: 2226 opt: 2226  Z-score: 2681.8  bits: 505.3 E(85289): 1.2e-142
Smith-Waterman score: 2226; 99.4% identity (99.7% similar) in 339 aa overlap (205-543:1-339)

          180       190       200       210       220       230    
pF1KB5 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHN
                                     . ::::::::::::::::::::::::::::
NP_001                               MMDSQLVAGVAFKKTFSYAGFEMQPKKYHN
                                             10        20        30

          240       250       260       270       280       290    
pF1KB5 PKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLP
               40        50        60        70        80        90

          300       310       320       330       340       350    
pF1KB5 IGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIG
              100       110       120       130       140       150

          360       370       380       390       400       410    
pF1KB5 GERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM
              160       170       180       190       200       210

          420       430       440       450       460       470    
pF1KB5 ELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTW
              220       230       240       250       260       270

          480       490       500       510       520       530    
pF1KB5 YGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAG
              280       290       300       310       320       330

          540   
pF1KB5 RGRGRGRPH
       :::::::::
NP_001 RGRGRGRPH
                

>>NP_006422 (OMIM: 605139) T-complex protein 1 subunit b  (535 aa)
 initn: 897 init1: 455 opt: 1012  Z-score: 1218.3  bits: 235.2 E(85289): 4e-61
Smith-Waterman score: 1012; 35.6% identity (67.2% similar) in 528 aa overlap (5-527:8-529)

                  10         20        30        40        50      
pF1KB5    MMPTPVILLKEGTDSSQG-IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVD-GRGK
              :: ..: :.:  ..   .:.: :.:  .:.. :..::::.::::.... ::  
NP_006 MASLSLAPVNIFKAGADEERAETARLTSFIGAI-AIGDLVKSTLGPKGMDKILLSSGRDA
               10        20        30         40        50         

           60        70        80        90       100       110    
pF1KB5 AT-ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEE
       .  ..:::::::: . : .::::.:::... :: ::::::::::.::::.:....  . .
NP_006 SLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAK
      60        70        80        90       100       110         

          120       130       140       150       160       170    
pF1KB5 GLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAF
        .::: :: ..: ::. : . .   ::  . .:.:. :. : . : :.:::::....:  
NP_006 KIHPQTIIAGWREATKAAREALLSSAVD-HGSDEVKFRQDLMNIAGTTLSSKLLTHHKDH
     120       130       140        150       160       170        

          180       190       200       210       220       230    
pF1KB5 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHN
       :.:..:.::. :    .:. : : :  ::.: :: :  :  . : ..      :::. .:
NP_006 FTKLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIEN
      180       190       200       210       220           230    

          240        250       260       270       280       290   
pF1KB5 PKIALLNVELEL-KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKL
        :: . :. ..  : .  ....:: ..     :  :: . . .:.:.: . : .  ... 
NP_006 AKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQ
          240       250       260       270       280       290    

           300       310       320       330       340       350   
pF1KB5 PIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQI
        : .   : :.   ..   ..    ..:  .. :: : .. .      :: :...::..:
NP_006 LIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMI
          300       310       320       330       340       350    

           360       370       380       390       400       410   
pF1KB5 GGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIE
       : ..   :.:   ...::..:::...:...:.:::::::. .. ...:.. .: :::  :
NP_006 GEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSE
          360       370       380       390       400       410    

           420       430       440       450       460       470   
pF1KB5 MELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGT
       : ... . . .   :::. . . .:::::...:  . ::::.:..... .::: :..:.:
NP_006 MLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNT
          420       430       440       450       460       470    

           480       490       500       510       520        530  
pF1KB5 WYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKN-PRSTVDAPTA
         :.:. .  :.:     . :  .:. ..: .:.::: .:. ::. ::  ::. :     
NP_006 TAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHHP
          480       490       500       510       520       530    

            540   
pF1KB5 AGRGRGRGRPH
                  
NP_006 C          
                  

>>NP_006421 (OMIM: 605142) T-complex protein 1 subunit d  (539 aa)
 initn: 830 init1: 413 opt: 1005  Z-score: 1209.8  bits: 233.6 E(85289): 1.2e-60
Smith-Waterman score: 1005; 34.4% identity (68.9% similar) in 514 aa overlap (24-524:36-539)

                      10        20        30        40        50   
pF1KB5        MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGR
                                     ::::: ...:.:.::.:::.::::.: ::.
NP_006 APRSGATAGAAGGRGKGAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGK
          10        20        30        40        50        60     

            60        70        80        90       100       110   
pF1KB5 GKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVE
       : .::.:::::::: ..:.::::. ::...:.:: :.:::::::...:. .: .    ..
NP_006 GDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQ
          70        80        90       100       110       120     

           120       130       140       150       160       170   
pF1KB5 EGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKA
       .:.:: :: ..:. : . ... . ...  :. .:    :. : . : :.:.::..:: ..
NP_006 KGIHPTIISESFQKALEKGIEILTDMSRPVELSD----RETLLNSATTSLNSKVVSQYSS
         130       140       150           160       170       180 

           180            190       200       210       220        
pF1KB5 FFAKMVVDAVMMLDD-----LLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQ
       ... : :.::: . :      ..:. : : :  ::...: .:: :... .  : .:.   
NP_006 LLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGIT--
             190       200       210       220       230           

      230       240        250       260       270       280       
pF1KB5 PKKYHNPKIALLNVELEL-KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAK
         . .. ::.:..  :   :.. :: .: :    ... ..  :   . . ...:...: .
NP_006 --RVEKAKIGLIQFCLSAPKTDMDN-QIVVSDYAQMDRVLREERAYILNLVKQIKKTGCN
       240       250       260        270       280       290      

       290            300       310       320       330       340  
pF1KB5 VVLSKLPI-----GDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVL
       :.: .  :     .:.: ...    ..    . .::..    . : .  . .. ..::.:
NP_006 VLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADML
        300       310       320       330       340       350      

            350        360        370       380       390       400
pF1KB5 GRCQVFEETQIGGE-RYNFFTGCPK-AKTCTFILRGGAEQFMEETERSLHDAIMIVRRAI
       :  .. ::....:  .   .::: . .:: :...::. .  .::.:::.:::. ..:  .
NP_006 GSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLV
        360       370       380       390       400       410      

              410       420       430       440       450       460
pF1KB5 KNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNI
       :. ...::::: :.::.  : .::::. : ..  . :.: :.:.::  : .:::..  . 
NP_006 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPIST
        420       430       440       450       460       470      

              470       480       490       500       510       520
pF1KB5 LNKLRARHAQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI
       ...:: :::::    :... .  :.. .: .: .: .: ..::: :.:..  :...:...
NP_006 VTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVV
        480       490       500       510       520       530      

              530       540   
pF1KB5 KNPRSTVDAPTAAGRGRGRGRPH
        : :                   
NP_006 -NTR                   
                              

>>NP_005989 (OMIM: 600114) T-complex protein 1 subunit g  (545 aa)
 initn: 872 init1: 492 opt: 987  Z-score: 1188.1  bits: 229.6 E(85289): 1.9e-59
Smith-Waterman score: 987; 31.7% identity (66.1% similar) in 545 aa overlap (1-534:2-537)

                10        20        30        40        50         
pF1KB5  MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATIS
        :   ::..:...:   .:     .::.: ..::. .:: :::..: :...:  :  ...
NP_005 MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB5 NDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQ
       ::: .::. ..: :::::....:...:: ::::::::: .::.:.:. .. ..:. .:: 
NP_005 NDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPT
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB5 IIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMV
       ..: :.: : .  .. .:.:.. :  .:.     .. .   .....: ::. ...  ...
NP_005 VVISAYRKALDDMISTLKKISIPVDISDS----DMMLNIINSSITTKAISRWSSLACNIA
              130       140           150       160       170      

     180              190       200       210       220       230  
pF1KB5 VDAVMMLD-------DLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKY
       .::: :..       ..   :.  ..:. :: .::: .. :: ..:  ..     . ..:
NP_005 LDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP----RMRRY
        180       190       200       210       220           230  

             240       250       260       270       280       290 
pF1KB5 -HNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLS
        .::.:.::.  :: :  .....:..   ::.  :.. : . . .  : : .    ::..
NP_005 IKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVIT
            240       250       260       270       280       290  

             300       310       320       330       340        350
pF1KB5 KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGR-CQVFEE
       .  :.:.: .:.   ..    :: . : .:   :::. : .  . :  : .:    ..: 
NP_005 EKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEI
            300       310       320       330       340       350  

              360       370       380       390       400       410
pF1KB5 TQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG
        .:: : ..:.: :   :.::..:::...... :.::.:.::... : .. . ..: :::
NP_005 KKIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGG
            360       370       380       390       400       410  

              420       430       440       450       460       470
pF1KB5 AIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQ
       : :: ... : . :... : .:    : :.:::.::: : .: : ..  .:..:::.:.:
NP_005 ASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ
            420       430       440       450       460       470  

                480       490       500       510       520        
pF1KB5 GG--TWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVD
        .  :: ::. ..  ..:  :  .:::  :....  .: :.: :.. .:. ... ..  :
NP_005 ENCETW-GVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGD
             480       490       500       510       520       530 

      530       540   
pF1KB5 APTAAGRGRGRGRPH
         .  :         
NP_005 DQSRQGGAPDAGQE 
             540      

>>NP_001185771 (OMIM: 605139) T-complex protein 1 subuni  (488 aa)
 initn: 846 init1: 455 opt: 934  Z-score: 1125.0  bits: 217.8 E(85289): 6.3e-56
Smith-Waterman score: 934; 35.3% identity (66.7% similar) in 487 aa overlap (45-527:1-482)

           20        30        40        50          60        70  
pF1KB5 SSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVD-GRGKAT-ISNDGATILKLLDVV
                                     :::.... ::  .  ..:::::::: . : 
NP_001                               MDKILLSSGRDASLMVTNDGATILKNIGVD
                                             10        20        30

             80        90       100       110       120       130  
pF1KB5 HPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLA
       .::::.:::... :: ::::::::::.::::.:....  . . .::: :: ..: ::. :
NP_001 NPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAA
               40        50        60        70        80        90

            140       150       160       170       180       190  
pF1KB5 VNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQL
        . .   ::  . .:.:. :. : . : :.:::::....:  :.:..:.::. :    .:
NP_001 REALLSSAVD-HGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNL
              100        110       120       130       140         

            200       210       220       230       240        250 
pF1KB5 KMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELEL-KAEKD
       . : : :  ::.: :: :  :  . : ..      :::. .: :: . :. ..  : .  
NP_001 EAIHIIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIENAKILIANTGMDTDKIKIF
     150       160       170       180           190       200     

             260       270       280       290       300       310 
pF1KB5 NAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCA
       ....:: ..     :  :: . . .:.:.: . : .  ...  : .   : :.   ..  
NP_001 GSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAI
         210       220       230       240       250       260     

             320       330       340       350       360       370 
pF1KB5 GRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCT
        ..    ..:  .. :: : .. .      :: :...::..:: ..   :.:   ...::
NP_001 EHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACT
         270       280       290       300       310       320     

             380       390       400       410       420       430 
pF1KB5 FILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQ
       ..:::...:...:.:::::::. .. ...:.. .: :::  :: ... . . .   :::.
NP_001 IVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKE
         330       340       350       360       370       380     

             440       450       460       470       480       490 
pF1KB5 QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAF
        . . .:::::...:  . ::::.:..... .::: :..:.:  :.:. .  :.:     
NP_001 AVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDMREGTIGDMAILG
         390       400       410       420       430       440     

             500       510       520        530       540   
pF1KB5 VWEPAMVRINALTAASEAACLIVSVDETIKN-PRSTVDAPTAAGRGRGRGRPH
       . :  .:. ..: .:.::: .:. ::. ::  ::. :                
NP_001 ITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHHPC          
         450       460       470       480                  




543 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:19:25 2016 done: Thu Nov  3 16:19:26 2016
 Total Scan time:  9.500 Total Display time:  0.120

Function used was FASTA [36.3.4 Apr, 2011]
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