GENSCAN 1.0	Date run:  3-Nov-116	Time: 16:13:25

Sequence gi568815590f:38005551_38239068 : 233518 bp : 44.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  25024  25168  145  0  1   79   80   211 0.648  19.54
 1.02 Intr +  51531  51710  180  1  0  147  101   228 0.999  29.84
 1.03 Intr +  57581  57594   14  0  2   74   99     0 0.002  -5.80
 1.04 Intr +  67009  67113  105  0  0  116   45   107 0.392   9.61
 1.05 Intr +  67498  67546   49  0  1   82  101    56 0.352   4.55
 1.06 Term +  73407  73525  119  1  2  -24   45   123 0.050  -4.50
 1.07 PlyA +  73684  73689    6                               1.05

 2.06 PlyA -  73723  73718    6                               1.05
 2.05 Term -  79451  79290  162  2  0   26   33   137 0.067  -0.06
 2.04 Intr -  82506  82325  182  1  2   41   69   124 0.201   5.39
 2.03 Intr -  84185  83785  401  1  2   83   81   170 0.222   9.95
 2.02 Intr -  92710  92520  191  1  2   29  110    47 0.001  -0.62
 2.01 Init -  95561  95559    3  2  0   97   81     0 0.003   0.20
 2.00 Prom -  96860  96821   40                              -6.16

 3.00 Prom +  97659  97698   40                              -4.96
 3.01 Init + 100001 100188  188  1  2  104   94   111 0.875   9.84
 3.02 Intr + 100828 100894   67  1  1   70   94    57 0.931   3.41
 3.03 Intr + 101471 101616  146  1  2   57   80   132 0.876   8.38
 3.04 Intr + 104829 104917   89  0  2   70   71    47 0.885   0.81
 3.05 Intr + 105189 105283   95  1  2   93   75    72 0.929   6.08
 3.06 Intr + 109355 109450   96  1  0   61   88    88 0.987   6.31
 3.07 Intr + 111100 111175   76  0  1   80  115    43 0.999   5.29
 3.08 Intr + 113720 113813   94  0  1   67   59   140 0.985   8.02
 3.09 Intr + 115382 115599  218  2  2  106   87   115 0.997  11.35
 3.10 Intr + 122741 122908  168  0  0   87   87   152 0.979  14.92
 3.11 Intr + 123208 123401  194  2  2   74  113   144 0.998  14.71
 3.12 Intr + 127904 127996   93  1  0   73  105    48 0.960   5.16
 3.13 Intr + 130118 130216   99  1  0   71  100    26 0.822   2.41
 3.14 Term + 133414 133521  108  0  0  107   47    61 0.964   2.41
 3.15 PlyA + 134131 134136    6                               1.05

 4.08 PlyA - 136218 136213    6                               1.05
 4.07 Term - 138836 138723  114  2  0   64   49   162 0.951   8.47
 4.06 Intr - 139765 139672   94  0  1   90   67    27 0.460   0.77
 4.05 Intr - 140597 140413  185  2  2   50   90   236 0.995  18.59
 4.04 Intr - 140897 140739  159  2  0  104  105   313 0.849  34.78
 4.03 Intr - 142777 142650  128  2  2   58  111   143 0.998  14.00
 4.02 Intr - 143204 143091  114  0  0   72  123    80 0.346  10.32
 4.01 Init - 145268 145205   64  2  1   68   84    55 0.272   4.41
 4.00 Prom - 157278 157239   40                              -6.16

 5.05 PlyA - 157809 157804    6                               1.05
 5.04 Term - 158290 158120  171  1  0   87   33   226 0.998  14.83
 5.03 Intr - 164367 164252  116  1  2   47   92    92 0.930   5.67
 5.02 Intr - 170787 170725   63  1  0   69   79    93 0.963   5.19
 5.01 Init - 171321 171147  175  0  1   99   78    90 0.975   8.62
 5.00 Prom - 172985 172946   40                              -6.06

 6.00 Prom + 179845 179884   40                              -4.36
 6.01 Init + 189154 189165   12  0  0  110   89     4 0.685   2.65
 6.02 Intr + 202070 202216  147  1  0   50  109    55 0.384   4.23
 6.03 Intr + 203463 203717  255  2  0   85   97   146 0.997  12.84
 6.04 Term + 204458 204943  486  1  0   72   48   342 0.890  23.30
 6.05 PlyA + 205950 205955    6                               1.05

 7.04 PlyA - 206139 206134    6                               1.05
 7.03 Term - 217844 217813   32  0  2   54   42    38 0.168  -6.18
 7.02 Intr - 220673 220479  195  0  0   40  116    82 0.486   5.59
 7.01 Init - 226255 226111  145  1  1   52  100   134 0.748   9.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  88205  88340  136  1  1   59   38   121 0.811   4.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_1|203_aa
MSGGSSCSQTPSRAIPATRRVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRKFLM
ECRNSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKRAGGSKRQIFGFLVL
HSFIHTLSASTMIHRLQVPAEKPTYHILHSAGTLTRDIRYGLTHEMKAQKLQQRLNDCSI
EMNYRIIIFIMTLTNTESFVLLN

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_1|612_bp
atgtccgggggcagcagctgcagccagaccccaagccgggccatccccgccactcgccgg
gtggtgctcggcgacggcgtgcagctcccgcccggggactacagcacgacccccggcggc
acgctcttcagcaccaccccgggaggtaccaggatcatctatgaccggaaattcctgatg
gagtgtcggaactcacctgtgaccaaaacacccccaagggatctgcccaccattccgggg
gtcaccagcccttccagtgatgagccccccatggaagccagccagagccacctgcgcaat
agcccagaagataagcgggcgggcgggtctaagagacagatatttgggtttcttgtacta
cacagcttcattcatactctaagtgccagcaccatgattcatcgcctgcaggttccagca
gaaaaacccacctaccacatcctgcattctgcagggactctcacaagagacattcgctat
ggcctaacccatgaaatgaaggcccagaagcttcagcagagactgaatgactgctccatt
gagatgaactaccgcataattatcttcatcatgactttaacaaacacagaaagctttgtt
ttgcttaattga

>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_2|312_aa
MCYYREQETKGKYWTLEGLAELGGCTPAGAWISVFTLCSICTKLRKSHSKDERKHASEVL
VLPGRHFQLEEHTLSYMEKPQALIDLMQSIFLTHNPTWADCKQLLLSLFNTEEHRRVIQA
AHQRLEKNAPVGTGDVRQCARQALPIETDPGWDPNQAQDLLKLLRYQEALIQGIKTEGKK
ATNTGKVSEVYQKPDESPMLKPSGDYQPVQDLRAVNQVAAILHAIVPNPYTVLGQIPASA
AWFTCLDIKDAFFCILLAPSTKTCSLSSRPMDESARSRSSNSTDLAEEPRRSRKRQLPCY
DHTRGWSVNARL

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_2|939_bp
atgtgttattatagggaacaggagaccaagggaaaatactggacactggaaggcctggct
gagcttggaggatgcacacctgctggggcatggatttctgtcttcacactttgctccatc
tgcacaaagctacgtaagagtcacagcaaagatgaacggaaacatgcatctgaggttttg
gttttgccaggcagacattttcaactggaagagcatactctctcctatatggaaaaaccc
caggctcttatcgacctaatgcagtccatcttcttaactcacaacccaacctgggctgac
tgcaaacagctccttctgtcactgttcaatacagaagaacaccgcagagtaatacaagcg
gctcatcagaggctagaaaaaaatgccccagtaggtacaggagatgtcagacagtgtgct
cggcaggctttgccaatagaaactgacccaggctgggacccaaatcaggcccaagatctg
ctgaagttgctgagataccaagaggctctaatacaaggaataaagactgaagggaagaag
gcaacaaacactggaaaggtttcagaagtctatcagaaaccagatgaaagccccatgtta
aaaccttctggtgactaccagcctgtacaagatttaagggcagtcaaccaggtagctgct
atactgcatgctattgtgcctaacccgtacactgtgcttggacaaatacctgctagtgct
gcttggttcacatgcttggacattaaagatgcattcttctgcatcctgttagccccttca
actaaaacctgcagcctcagttcaagaccaatggacgagtcagcaagatccagatcatcc
aactcgactgatcttgcagaggaaccaaggcgcagcaggaaaagacaactgccctgctac
gaccacaccagaggctggtcggtcaacgcacggctgtag

>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_3|576_aa
MAAAGAGPGQEAGAGPGPGAVANATGAEEGEMKPVAAGAAAPPGEGISAAPTVEPSSGEA
EGGEANLVDVSGGLETESSNGKDTLEGAGDTSEVMDTQAGSVDEENGRQLGEVELQCGIC
TKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNTYFLRKQANLKEMCLSALANLTWQS
RTQDEHPKTMFSKDKSKERDVFLVKEHPDPGSKDPEEDYPKFGLLDQDLSNIGPAYDNQK
QSSAVSTSGNLNGGIAAGSSGKGRGAKRKQQDGGTTGTTKKARSDPLFSAQRLPPHGYPL
EHPFNKDGYRYILAEPDPHAPDPEKLELDCWAGKPIPGDLYRACLYERVLLALHDRAPQL
KISDDRLTVVGEKGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLG
YDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDTETAKSLPDTYKDKALI
KFKSYLYFEEKDFVDKAEKSLKQTPHSEIIFYKNGVNQGVAYKDIFEGVYFPAISLYKSC
TMSDMGWGAVVEHTLADVLYHVETEVDGRRSPPWEP

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_3|1731_bp
atggcggcggcaggagcaggacctggccaggaagcgggtgccgggcctggcccaggagcg
gtcgcaaatgcaacaggggcagaagagggggagatgaagccggtggcagcgggagcagcc
gctcctcctggagaggggatctctgctgctccgacagttgagcccagttccggggaggct
gaaggcggggaggcaaacttggtcgatgtaagcggtggcttggagacagaatcatctaat
ggaaaagatacactagaaggtgctggggatacatcagaggtgatggatactcaggcgggc
tccgtggatgaagagaatggccgacagttgggtgaggtagagctgcaatgtgggatttgt
acaaaatggttcacggctgacacatttggcatagatacctcatcctgtctacctttcatg
accaactacagttttcattgcaacgtctgccatcacagtgggaatacctatttcctccgg
aagcaagcaaacttgaaggaaatgtgccttagtgctttggccaacctgacatggcagtcc
cgaacacaggatgaacatccgaagacaatgttctccaaagataagagtaaagaaagagat
gtattcttggtaaaggaacacccagatccaggcagtaaagatccagaagaagattacccc
aaatttggacttttggatcaggaccttagtaacattggtcctgcttatgacaaccaaaaa
cagagcagtgctgtgtctactagtgggaatttaaatgggggaattgcagcaggaagcagc
ggaaaaggacgaggagccaagcgcaaacagcaggatggagggaccacagggaccaccaag
aaggcccggagtgaccctttgttttctgctcagcgccttccccctcatggctacccattg
gaacacccgtttaacaaagatggctatcggtatattctagctgagcctgatccgcacgcc
cctgaccccgagaagctggaacttgactgctgggcaggaaaacctattcctggagacctc
tacagagcctgcttgtatgaacgggttttgttagccctacatgatcgagctccccagtta
aagatctcagatgaccggctgactgtggttggagagaagggctactctatggtgagggcc
tctcatggagtacggaaaggtgcctggtattttgaaatcactgtggatgagatgccacca
gataccgctgccagactgggttggtcccagcccctaggaaaccttcaagctcctttaggt
tatgataaatttagctattcttggcggagcaaaaagggaaccaagttccaccagtccatt
ggcaaacactactcttctggctatggacagggagacgtcctgggattttatattaatctt
cctgaagacacagagacagccaagtcattgccagacacatacaaagataaggctttgata
aaattcaagagttatttgtattttgaggaaaaagactttgtggataaagcagagaagagc
ctgaagcagactccccatagtgagataatattttataaaaatggtgtcaatcaaggtgtg
gcttacaaagatatttttgagggggtttacttcccagccatctcactgtacaagagctgc
acgatgagtgacatgggctggggcgccgtggtagagcacaccctggctgacgtcttgtat
cacgtggagacagaagtggatgggaggcgcagtcccccatgggaaccctga

>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_4|285_aa
MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG
SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF
RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG
PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT
WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_4|858_bp
atgctgctagcgacattcaagctgtgcgctgggagctcctacagacacatgcgcaacatg
aaggggctgaggcaacaggctgtgatggccatcagccaggagctgaaccggagggccctg
gggggccccacccctagcacgtggattaaccaggttcggcggcggagctctctactcggt
tctcggctggaagagactctctacagtgaccaggagctggcctatctccagcagggggag
gaggccatgcagaaggccttgggcatccttagcaaccaagagggctggaagaaggagagt
cagcaggacaatggggacaaagtgatgagtaaagtggtcccagatgtgggcaaggtgttc
cggctggaggtcgtggtggaccagcccatggagaggctctatgaagagctcgtggagcgc
atggaagcaatgggggagtggaaccccaatgtcaaggagatcaaggtcctgcagaagatc
ggaaaagatacattcattactcacgagctggctgccgaggcagcaggaaacctggtgggg
ccccgtgactttgtgagcgtgcgctgtgccaagcgccgaggctccacctgtgtgctggct
ggcatggccacagacttcgggaacatgcctgagcagaagggtgtcatcagggcggagcac
ggtcccacttgcatggtgcttcacccgttggctggaagtccctctaagaccaaacttacg
tggctactcagcatcgacctcaaggggtggctgcccaagagcatcatcaaccaggtcctg
tcccagacccaggtggattttgccaaccacctgcgcaagcgcctggagtcccaccctgcc
tctgaagccaggtgttga

>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_5|174_aa
MGSAALKRFPPRSPRPTHRAGARGRLRMESSEGGRTTPANPRPGPAPSAAEPRKLRDGAL
FQFKMNYMPGTASLIEDIDTNLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDL
EKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDRGLSIPRADTLDEY

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_5|525_bp
atgggatccgctgccctgaagcgcttcccgccccgctccccacggccgacccatcgcgca
ggcgcccgcgggcgattgcgaatggagagcagcgaagggggtcggacgacgccagccaat
cccaggcccgggcccgccccttctgctgccgaaccccgaaagctgagggacggagcatta
tttcagttcaaaatgaactatatgcctggcaccgccagcctcatcgaggacattgacaca
aacttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatatt
cctcgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttg
gaaaaggagagtgacacacccctccagcaagtatccattgaagaaattctagaagaacaa
agggtggaacagcagaccaagctggaagcagagaagttgaaagtgcaggccctgaaggac
cgaggtctttccattcctcgagcagatactcttgatgagtactaa

>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_6|299_aa
MPGQTSYSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLP
HYPYGDGNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPW
PSSGSPQSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQ
VQYSAEPQLYGNATSDHPNNQDQSSSLPEECVPSDESTPPSIKKIIHVLEKVQYLEQEVE
EFVGKKTDKAYWLLEEMLTKELLELDSVETGGQDSVRQARKEAVCKIQAILEKLEKKGL

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_6|900_bp
atgcctggccagaccagttactccacagaagttccaagtacttaccgttcatctggcaac
agcccaactccagtctctcgttggatctatccccagcaggactgtcagactgaagcaccc
cctcttagggggcaggttccaggatatccgccttcacagaaccctggaatgaccctgccc
cattatccttatggagatggtaatcgtagtgttccacaatcaggaccgactgtacgacca
caagaagatgcgtgggcttctcctggtgcttatggaatgggtggccgttatccctggcct
tcatcagcgccctcagcaccacccggcaatctctacatgactgaaagtacttcaccatgg
cctagcagtggctctccccagtcacccccttcacccccagtccagcagcccaaggattct
tcatacccctatagccaatcagatcaaagcatgaaccggcacaactttccttgcagtgtc
catcagtacgaatcctcggggacagtgaacaatgatgattcagatcttttggattcccaa
gtccagtatagtgctgagcctcagctgtatggtaatgccaccagtgaccatcccaacaat
caagatcaaagtagcagtcttcctgaagaatgtgtaccttcagatgaaagtactcctccg
agtattaaaaaaatcatacatgtgctggagaaggtccagtatcttgaacaagaagtagaa
gaatttgtaggaaaaaagacagacaaagcatactggcttctggaagaaatgctaaccaag
gaacttttggaactggattcagttgaaactgggggccaggactctgtacggcaggccaga
aaagaggctgtttgtaagattcaggccatactggaaaaattagaaaaaaaaggattatga

>gi568815590f:38005551_38239068|GENSCAN_predicted_peptide_7|123_aa
MARPRPLPQPGRGAAEQGGTCSPAGLAPNTRRHGAPSGRVAGPDARRKGLSSTGRNAATR
NHNDSTELEIQTDTQPLWAPHASESKGQEGNYYVAGVTDPDYQGEIGLLLPSEATTEKFL
PST

>gi568815590f:38005551_38239068|GENSCAN_predicted_CDS_7|372_bp
atggcccggccgcggcctttaccccagcccgggcggggcgcggcggagcagggcggaacc
tgcagccccgccgggctcgcgccgaacaccaggcgccacggcgctcccagtgggcgagta
gcgggcccggatgccaggcgaaaaggtcttagttccacagggaggaatgctgccaccagg
aaccacaacgattccactgaactggaaattcagactgacacccagccactttgggctcct
catgcatctgagtcaaaaggccaagaagggaattactatgttgctggggtgactgatcca
gactatcaaggggaaattggcctactactccctagtgaagccacaactgaaaagttcctg
ccctcaacgtga