Result of FASTA (ccds) for pF1KB5122
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5122, 514 aa
  1>>>pF1KB5122 514 - 514 aa - 514 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.4104+/-0.00132; mu= 1.8621+/- 0.077
 mean_var=179.9863+/-39.116, 0's: 0 Z-trim(105.1): 178  B-trim: 0 in 0/51
 Lambda= 0.095599
 statistics sampled from 8040 (8241) to 8040 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.253), width:  16
 Scan time:  3.220

The best scores are:                                      opt bits E(32554)
CCDS46961.1 TBL1XR1 gene_id:79718|Hs108|chr3       ( 514) 3472 492.2 5.9e-139
CCDS48078.1 TBL1X gene_id:6907|Hs108|chrX          ( 526) 2486 356.2 5.2e-98
CCDS14133.1 TBL1X gene_id:6907|Hs108|chrX          ( 577) 2486 356.2 5.6e-98
CCDS14779.1 TBL1Y gene_id:90665|Hs108|chrY         ( 522) 2464 353.2 4.2e-97
CCDS2019.1 CIAO1 gene_id:9391|Hs108|chr2           ( 339)  398 68.1 1.8e-11


>>CCDS46961.1 TBL1XR1 gene_id:79718|Hs108|chr3            (514 aa)
 initn: 3472 init1: 3472 opt: 3472  Z-score: 2608.2  bits: 492.2 E(32554): 5.9e-139
Smith-Waterman score: 3472; 100.0% identity (100.0% similar) in 514 aa overlap (1-514:1-514)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
              430       440       450       460       470       480

              490       500       510    
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       ::::::::::::::::::::::::::::::::::
CCDS46 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
              490       500       510    

>>CCDS48078.1 TBL1X gene_id:6907|Hs108|chrX               (526 aa)
 initn: 2400 init1: 2400 opt: 2486  Z-score: 1873.1  bits: 356.2 E(32554): 5.2e-98
Smith-Waterman score: 3118; 86.3% identity (94.9% similar) in 527 aa overlap (1-514:1-526)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       :::.:::::::::::::::::::::::::::::::::::::.::::::::::.:::::::
CCDS48 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAA--
       :::.:::::::.::::::::::::::::::::::::::.:.:::::::.::::::::.  
CCDS48 EAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAA
               70        80        90       100       110       120

                 120       130       140       150       160       
pF1KB5 -----------SQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRG
                  :.:. .:: : :.::::: ::.. :::.  ::.::.:::: .::.::::
CCDS48 ATAATTTSAGVSHQNPSKNREATVNGEENRAHSV-NNHAKPMEIDGEVEIPSSKATVLRG
              130       140       150        160       170         

       170       180       190       200       210       220       
pF1KB5 HESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKD
       :::::::::::::::::::::::::::::::.:::..:::::::::::::::.:::::::
CCDS48 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKD
     180       190       200       210       220       230         

       230       240       250       260       270       280       
pF1KB5 VTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVD
       :::::::..:::::::::::::::::.:::::::::::::::::::::.:::.:::::::
CCDS48 VTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVD
     240       250       260       270       280       290         

       290       300       310       320       330       340       
pF1KB5 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQG
       ::::::::::::::::::::::::::::::.:.::::::::::::::.:: :::.:::::
CCDS48 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQG
     300       310       320       330       340       350         

       350       360       370       380       390       400       
pF1KB5 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN
       ::::::::::::.: ::::::::::::::::::. :.::::::::::::::::::::.:.
CCDS48 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATS
     360       370       380       390       400       410         

       410       420       430       440       450       460       
pF1KB5 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH
       :::.:.:::::::::::::::..::.: :::::::::::::::::::.::::::::::::
CCDS48 NPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH
     420       430       440       450       460       470         

       470       480       490       500       510    
pF1KB5 IWNTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       :::::.: :::::::::::::::::: ::::::::::::::::::::
CCDS48 IWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
     480       490       500       510       520      

>>CCDS14133.1 TBL1X gene_id:6907|Hs108|chrX               (577 aa)
 initn: 2400 init1: 2400 opt: 2486  Z-score: 1872.5  bits: 356.2 E(32554): 5.6e-98
Smith-Waterman score: 3118; 86.3% identity (94.9% similar) in 527 aa overlap (1-514:52-577)

                                             10        20        30
pF1KB5                               MSISSDEVNFLVYRYLQESGFSHSAFTFGI
                                     :::.::::::::::::::::::::::::::
CCDS14 QSVLHHFQRLRGREGGSHFINTSSPRGEAKMSITSDEVNFLVYRYLQESGFSHSAFTFGI
              30        40        50        60        70        80 

               40        50        60        70        80        90
pF1KB5 ESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPD
       :::::::::::.::::::::::.::::::::::.:::::::.::::::::::::::::::
CCDS14 ESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPD
              90       100       110       120       130       140 

              100       110                    120       130       
pF1KB5 VVQTRQQAYRDKLAQQQAAAAAAAAAAA-------------SQQGSAKNGENTANGEENG
       ::::::::.:.:::::::.::::::::.             :.:. .:: : :.::::: 
CCDS14 VVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNREATVNGEENR
             150       160       170       180       190       200 

       140       150       160       170       180       190       
pF1KB5 AHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWN
       ::.. :::.  ::.::.:::: .::.::::::::::::::::::::::::::::::::::
CCDS14 AHSV-NNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWN
              210       220       230       240       250       260

       200       210       220       230       240       250       
pF1KB5 LSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN
       :.:::..:::::::::::::::.::::::::::::::..:::::::::::::::::.:::
CCDS14 LNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGN
              270       280       290       300       310       320

       260       270       280       290       300       310       
pF1KB5 LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ
       ::::::::::::::::::.:::.:::::::::::::::::::::::::::::::::::::
CCDS14 LASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ
              330       340       350       360       370       380

       320       330       340       350       360       370       
pF1KB5 SNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS
       .:.::::::::::::::.:: :::.:::::::::::::::::.: :::::::::::::::
CCDS14 NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS
              390       400       410       420       430       440

       380       390       400       410       420       430       
pF1KB5 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT
       :::. :.::::::::::::::::::::.:.:::.:.:::::::::::::::..::.: ::
CCDS14 MKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHT
              450       460       470       480       490       500

       440       450       460       470       480       490       
pF1KB5 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGGIFEVCWNAAGDK
       :::::::::::::::::.:::::::::::::::::.: :::::::::::::::::: :::
CCDS14 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDK
              510       520       530       540       550       560

       500       510    
pF1KB5 VGASASDGSVCVLDLRK
       :::::::::::::::::
CCDS14 VGASASDGSVCVLDLRK
              570       

>>CCDS14779.1 TBL1Y gene_id:90665|Hs108|chrY              (522 aa)
 initn: 2375 init1: 2375 opt: 2464  Z-score: 1856.7  bits: 353.2 E(32554): 4.2e-97
Smith-Waterman score: 3032; 84.9% identity (93.7% similar) in 523 aa overlap (1-512:1-522)

               10        20        30        40        50        60
pF1KB5 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
       :::.:::::::::::::::::::::::::::::::::::::.::::.:::::.:::::::
CCDS14 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYV
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KB5 EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAA-----
       :::.:::.:::.::.::::::::: ::.::::: ::::. .::.::::.:::. :     
CCDS14 EAEISINKDGTVFDSRPIESLSLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAK
               70        80        90       100       110       120

               120       130       140       150       160         
pF1KB5 ------AAASQQGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHE
             :: :::.  :: : :.:::::::: : :::.  ::.:::::::::::.::::::
CCDS14 AATMTPAAISQQNPPKNREATVNGEENGAHEI-NNHSKPMEIDGDVEIPPNKATVLRGHE
              130       140       150        160       170         

     170       180       190       200       210       220         
pF1KB5 SEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVT
       :::::::::::::::::::::::::::::.:::..:::::::::::::::.:::::::::
CCDS14 SEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVT
     180       190       200       210       220       230         

     230       240       250       260       270       280         
pF1KB5 SLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKT
       ::::::.::::: :::::::::::..::::::::::::::::::::::::..::::::::
CCDS14 SLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKT
     240       250       260       270       280       290         

     290       300       310       320       330       340         
pF1KB5 TIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHT
       ::::::::::::::::::::::::::::.: ::::::::::::::.:: :.:.:::::::
CCDS14 TIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHT
     300       310       320       330       340       350         

     350       360       370       380       390       400         
pF1KB5 NEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNP
       ::::::::::.: ::::::::::::::::::: ::::::::.:::::::::::::.:.::
CCDS14 NEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNP
     360       370       380       390       400       410         

     410       420       430       440       450       460         
pF1KB5 NANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW
       :...::::::::::::::::..:.: ::: :::::::::::::::.::::::::: ::::
CCDS14 NSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIW
     420       430       440       450       460       470         

     470       480       490       500       510    
pF1KB5 NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
       :::.:.:::::.:::::::::::: ::::::::::::::::::  
CCDS14 NTQSGSLVHSYQGTGGIFEVCWNARGDKVGASASDGSVCVLDL  
     480       490       500       510       520    

>>CCDS2019.1 CIAO1 gene_id:9391|Hs108|chr2                (339 aa)
 initn: 463 init1: 156 opt: 398  Z-score: 319.5  bits: 68.1 E(32554): 1.8e-11
Smith-Waterman score: 408; 32.4% identity (54.1% similar) in 259 aa overlap (222-469:11-221)

             200       210       220       230         240         
pF1KB5 TARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTS--LDWNSEGTLLATGSYDGFA
                                     ::.. :     : ::  :::::. . :   
CCDS20                     MKDSLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRI
                                   10        20        30        40

     250          260        270       280       290       300     
pF1KB5 RIWTKDGN---LASTLGQ-HKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFP
       :::  .:.     :.:.. :.  .  . :.  ::.. ::. : :: ::       :.:  
CCDS20 RIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK------KNQDD
               50        60        70        80              90    

         310       320       330       340       350       360     
pF1KB5 FHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA
       :.                      :.            :..:: :::... : :.:::::
CCDS20 FE----------------------CV-----------TTLEGHENEVKSVAWAPSGNLLA
                                           100       110       120 

         370       380          390       400       410       420  
pF1KB5 SCSDDMTLKIWSMKQDN---CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDS
       .:: : .. .: . ...   ::  :..:....  . : :.           .:::::.:.
CCDS20 TCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE---------LLASASYDD
             130       140       150       160                170  

              430       440       450       460       470       480
pF1KB5 TVRLW--DVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
       ::.:.  . :  .:  ::  :.  :.:.::.:.:. ::: : :. :.::           
CCDS20 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV
            180       190       200       210       220       230  

              490       500       510                              
pF1KB5 RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK                          
                                                                   
CCDS20 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF
            240       250       260       270       280       290  




514 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:08:13 2016 done: Thu Nov  3 16:08:13 2016
 Total Scan time:  3.220 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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