GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:51:28

Sequence gi568815594r:87992237_88239995 : 247759 bp : 40.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3265   3345   81  0  0    7   78   165 0.434   6.32
 1.02 Term +   3716   3829  114  1  0   70   44    69 0.834  -1.71
 1.03 PlyA +   4324   4329    6                               1.05

 2.00 Prom +  12510  12549   40                              -5.35
 2.01 Init +  15498  16092  595  2  1   93   94   307 0.207  27.26
 2.02 Intr +  27222  27335  114  1  0   70   84    82 0.347   5.50
 2.03 Term +  34082  34494  413  0  2   44   43   207 0.311   6.22
 2.04 PlyA +  36570  36575    6                              -0.45

 3.00 Prom +  38279  38318   40                              -4.55
 3.01 Init +  43336  43378   43  0  1  114   65     3 0.414   1.32
 3.02 Intr +  43984  44117  134  2  2   96   63   102 0.965   7.94
 3.03 Intr +  46015  46265  251  0  2   54   96   275 0.974  20.21
 3.04 Intr +  50997  51221  225  0  0   57   89   187 0.982  11.88
 3.05 Term +  52473  52722  250  0  1   67   48   124 0.944   0.49
 3.06 PlyA +  52783  52788    6                               1.05

 4.00 Prom +  58301  58340   40                              -3.85
 4.01 Init +  58466  58604  139  1  1   70   77    83 0.325   5.75
 4.02 Intr +  60727  60874  148  2  1   63   98   119 0.314   8.77
 4.03 Intr +  63876  64031  156  0  0   64   92   105 0.734   6.70
 4.04 Intr +  65747  65867  121  2  1   63   76    70 0.997   2.88
 4.05 Intr +  67744  67812   69  0  0   84   84    25 0.527   0.16
 4.06 Intr +  69670  69768   99  0  0   65   97   107 0.994   8.69
 4.07 Intr +  73138  73259  122  0  2   84   76   137 0.999  10.47
 4.08 Intr +  73526  73643  118  2  1   92   59   233 0.941  20.35
 4.09 Intr +  75662  75825  164  1  2  109   84   164 0.994  15.95
 4.10 Intr +  82576  82723  148  1  1  103   78   185 0.866  18.32
 4.11 Term +  83222  83458  237  1  0  120   40   186 0.946  12.18
 4.12 PlyA +  84599  84604    6                               1.05

 5.16 PlyA -  85115  85110    6                               1.05
 5.15 Term -  88457  88400   58  1  1   72   49    82 0.217  -1.12
 5.14 Intr -  92648  92379  270  1  0   73   56   198 0.297  10.83
 5.13 Intr -  94223  94131   93  1  0   54   87    97 0.756   4.36
 5.12 Intr - 102423 102341   83  0  2   88  111    34 0.974   3.22
 5.11 Intr - 103363 103284   80  2  2   62   92   103 0.138   6.45
 5.10 Intr - 105371 105217  155  1  2   70  101    78 0.136   6.09
 5.09 Intr - 109083 108994   90  2  0   89   84    76 0.213   5.49
 5.08 Intr - 115030 114948   83  1  2   53  111    38 0.222   0.12
 5.07 Intr - 121311 121067  245  1  2   -2   91   119 0.299  -0.51
 5.06 Intr - 122822 122721  102  0  0   78   71    90 0.597   5.53
 5.05 Intr - 126024 125873  152  2  2   74   60    99 0.166   4.59
 5.04 Intr - 129556 129399  158  1  2   50   94   113 0.029   5.99
 5.03 Intr - 138977 138825  153  2  0   41   90   100 0.631   4.85
 5.02 Intr - 139681 139567  115  0  1   70  108    74 0.759   7.13
 5.01 Init - 140392 140340   53  1  2   73   69    66 0.866   3.88
 5.00 Prom - 142898 142859   40                              -5.25

 6.00 Prom + 143037 143076   40                              -4.75
 6.01 Init + 143898 143969   72  2  0   71   53    64 0.784   0.46
 6.02 Intr + 146186 146329  144  1  0  119   69    93 0.944  10.06
 6.03 Intr + 153094 153340  247  0  1   74   61    65 0.018  -1.49
 6.04 Intr + 155978 156096  119  0  2   92    2   108 0.043   1.86
 6.05 Term + 166983 167159  177  2  0   56   41   203 0.950   9.10
 6.06 PlyA + 168086 168091    6                               1.05

 7.00 Prom + 170386 170425   40                              -6.95
 7.01 Init + 171343 171399   57  0  0   86   57    96 0.145   7.66
 7.02 Intr + 184270 184345   76  0  1   89   58    41 0.621  -0.63
 7.03 Intr + 185493 185644  152  1  2  106   76    88 0.552   8.36
 7.04 Intr + 211657 211752   96  0  0   79   88    49 0.099   3.29
 7.05 Intr + 214647 214721   75  2  0   46   91    52 0.142   0.09
 7.06 Intr + 221114 221161   48  1  0   59  100    46 0.042   0.86
 7.07 Term + 229168 229662  495  0  0  -37   42   381 0.011  14.58
 7.08 PlyA + 233066 233071    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 103373 103284   90  2  0   82   92    99 0.858   8.97
S.002 Sngl + 127296 127943  648  2  0   48   33   317 0.919  18.12
S.003 Term + 146380 146508  129  0  0   26   48   130 0.803   0.00
S.004 Init + 155593 155608   16  0  1   56  121    10 0.814   1.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_1|64_aa
VKEIKKQEEEGEKGKDEDKEKKQQEEESRDAKSQNTIEQEIETEISLHQILKTNFPADKA
IYVD

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_1|195_bp
gtaaaagaaatcaagaaacaggaggaggagggggaaaaggggaaagacgaggataaagag
aaaaagcagcaggaagaggagagcagagatgccaaatcccagaacacaattgagcaggaa
atagagacggaaataagcctacatcaaattctaaaaactaattttcctgcagataaagca
atatatgtggattag

>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_2|373_aa
MVNSSRVQPQQPGDAKRPPAPRAPDPGRLMAGCAAVGASLAAPGGLCEQRGLEIEMQRIR
QAAARDPPAGAAASPSPPLSSCSRQAWSRDNPGFEAEEEEEEVEGEEGGMVVEMDVEWRP
GSRRSAASSAVSSVGARSRGLGGYHGAGHPSGRRRRREDQGPPCPSPVGGGDPLHRHLPL
EGQPPRVAWAERLVRGLRGLWGTRLMEESSTNREKYLKSVLRELVTYLLFLIVLCISKRL
AAFFPCPRDLWNFELERHDLEYLAEDISKHQSIREVTWLFLKAYSYMCSQRDGLKLELMF
KGEAECNKSLGSLQPDHVVEKKNPFSGEKFKLAGEICISNEELNVSCQDNGVNVSRAFQK
IFRADPHNTSLEA

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_2|1122_bp
atggtgaactccagtcgcgtgcagcctcagcagcccggggacgccaagcggccgcccgcg
ccccgcgcgccggacccgggccggctgatggctggctgcgcggccgtgggcgccagcctc
gccgccccgggcggcctctgcgagcagcggggcctggagatcgagatgcagcgcatccgg
caggcggccgcgcgggaccccccggccggagccgcggcctccccttctcctccgctctcg
tcgtgctcccggcaggcgtggagccgcgataaccccggcttcgaggccgaggaggaggag
gaggaggtggaaggggaagaaggcggaatggtggtggagatggacgtagagtggcgcccg
ggcagccggaggtcggccgcctcctcggccgtgagctccgtgggcgcgcggagccggggg
cttgggggctaccacggcgcgggccacccgagcgggaggcggcgccggcgagaggaccag
ggcccgccgtgccccagcccagtcggcggcggggacccgctgcatcgccacctccccctg
gaagggcagccgccccgagtggcctgggcggagaggctggttcgcgggctgcgaggtctc
tggggaacaagactcatggaggaaagcagcactaaccgagagaaataccttaaaagtgtt
ttacgggaactggtcacatacctcctttttctcatagtcttgtgcatctcgaagagactg
gcagcatttttcccctgccctagagatctgtggaactttgaacttgagagacatgattta
gagtatctggcagaagatatttctaagcaccaaagcattcgagaggtgacctggcttttc
ctgaaagcatacagttatatgtgctcacaaagagatggtttgaaattggaacttatgttt
aaaggggaagcagagtgcaacaaaagtttagggagtttgcagcctgaccatgtggtagaa
aagaaaaacccattttctggggagaaattcaagctggctggagaaatttgcataagtaac
gaggagctgaatgtgagttgccaagacaatggggtaaatgtctccagggcgtttcagaaa
atcttcagggcagaccctcacaacacaagcctggaggcctag

>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_3|300_aa
MAKVRVSTAKLHPGVTYGMMSSNVYYYTRMMSQLFLDTPVSKTEKTNFKTLSSMEDFWKF
TEGSLLDGLYWKMQPSNQTEADNRSFIFYENLLLGVPRIRQLRVRNGSCSIPQDLRDEIK
ECYDVYSVSSEDRAPFGPRNGTAWIYTSEKDLNGSSHWGIIATYSGAGYYLDLSRTREET
AAQVASLKKNVWLDRGTRATFIDFSVYNANINLFCVVRDVESTVVCQHVDNDLSHEVGCG
IFHLCVHGGAQKVWDFEAFYISDFHIRNTQAVLAHSGQKKRKKEKKYSTSSPVVVITRNE

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_3|903_bp
atggccaaggttagagtctccactgccaaactgcatccaggtgtgacctacggcatgatg
agctccaatgtgtactactacacccggatgatgtcacagctcttcctagacacccccgtg
tccaaaacggagaaaactaactttaaaactctgtcttccatggaagacttctggaagttc
acagaaggctccttattggatgggctgtactggaagatgcagcccagcaaccagactgaa
gctgacaaccgaagtttcatcttctatgagaacctgctgttaggggttccacgaatacgg
caactccgagtcagaaatggatcctgctctatcccccaggacttgagagatgaaattaaa
gagtgctatgatgtctactctgtcagtagtgaagatagggctccctttgggccccgaaat
ggaaccgcttggatctacacaagtgaaaaagacttgaatggtagtagccactggggaatc
attgcaacttatagtggagctggctattatctggatttgtcaagaacaagagaggaaaca
gctgcacaagttgctagcctcaagaaaaatgtctggctggaccgaggaaccagggcaact
tttattgacttctcagtgtacaacgccaacattaacctgttctgtgtggtcagggatgtt
gaatcaactgttgtgtgccagcatgttgacaatgacctgtcacatgaagtcgggtgtgga
attttccacttgtgcgttcatggcggtgctcagaaagtttgggattttgaagcattttat
atttcagattttcacattagaaatactcaagctgtccttgctcacagtggccaaaaaaaa
agaaagaaagaaaagaaatactcaaccagtagtccagtagtagttatcactagaaatgaa
tga

>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_4|506_aa
MSSSSQEKPIPTAGLLESAVFIIPTTNTKIQDWLWKSFTEKEGKEDDIMCISMCVKGYDI
SYTTSLNSGDAGNFNNSQAAAAIRSPAQALIVLSRQTMSQLSTTMSRCAKDLFGFAIMFF
IIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEANRVLGPIYFTTFV
FFMFFILLERHPGADVHLIIQGTSGDRMERRNMFLAIINDTYSEVKSDLAQQKAEMELSD
LIRKGYHKALVKLKLKKNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKY
DQDGDQELTEHEHQQMRDDLEKEREDLDLDHSSLPRPMSSRSFPRSLDDSEEDDDEDSGH
SSRRRGSISSGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLG
RLLDGVAEDERLGRDSEIHREQMERLVREELERWESDDAASQISHGLGTPVGLNGQPRPR
SSRPSSSQSTEGMEGAGGNGSSNVHV

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_4|1521_bp
atgagctcctcatctcaggagaagcctattcccactgcaggccttcttgagtctgctgtg
ttcatcattcccaccaccaacacaaaaatacaagattggctctggaaatccttcacagag
aaggaaggaaaggaagatgatataatgtgcatttccatgtgtgtgaaaggttatgacatt
tcatatacaacaagcctcaattctggagatgcaggaaatttcaataattctcaggcagca
gctgccattcggtcaccagcacaggctctgattgtgctgtccagacagaccatgagccag
ctctcgacaaccatgtctcgatgtgccaaagacctgtttggctttgctattatgttcttc
attattttcctagcgtatgctcagttggcataccttgtctttggcactcaggtcgatgac
ttcagtactttccaagagtgtatcttcactcaattccgtatcattttgggcgatatcaac
tttgcagagattgaggaagctaatcgagttttgggaccaatttatttcactacatttgtg
ttctttatgttcttcattcttttggaaagacatcctggtgcagatgtccatctgataatt
cagggaacctcgggagacaggatggagaggaggaatatgtttttggctatcatcaatgat
acttactctgaagtgaaatctgacttggcacagcagaaagctgaaatggaactctcagat
cttatcagaaagggctaccataaagctttggtcaaactaaaactgaaaaaaaataccgtg
gatgacatttcagagagtctgcggcaaggaggaggcaagttaaactttgacgaacttcga
caagatctcaaagggaagggccatactgatgcagagattgaggcaatattcacaaagtac
gaccaagatggagaccaagaactgaccgaacatgaacatcagcagatgagagacgacttg
gagaaagagagggaggacctggatttggatcacagttctttaccacgtcccatgagcagc
cgaagtttccctcgaagcctggatgactctgaggaggatgacgatgaagatagcggacat
agctccagaaggaggggaagcatttctagtggcgtttcttacgaagagtttcaagtcctg
gtgagacgagtggaccggatggagcattccatcggcagcatagtgtccaagattgacgcc
gtgatcgtgaagctagagattatggagcgagccaaactgaagaggagggaggtgctggga
aggctgttggatggggtggccgaggatgaaaggctgggtcgtgacagtgaaatccatagg
gaacagatggaacggctagtacgtgaagagttggaacgctgggaatccgatgatgcagct
tcccagatcagtcatggtttaggcacgccagtgggactaaatggtcaacctcgccccaga
agctcccgcccatcttcctcccaatctacagaaggcatggaaggtgcaggtggaaatggg
agttctaatgtccacgtatga

>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_5|629_aa
MKPGLNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLINGAPRPANFKCNSGYVVQDDVV
MGTLTVRENLQFSAALRLATTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGE
RKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIF
KLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNRE
EDFKEIIEPSKQDKPLIEKLAEIYVNSSFYKETKAELHQLSGGEKKKKITVFKEISYTTS
FCHQLRWVSKRSFKNLLGNPQASIAQIIVTVVLGLVIGAIYFGLKNDSTGIQNRAGVLFF
LTTNQCFSSVSAVELFVVEKKLFMIEAKGRCLLRYDVYPYDGGLFSQFHGTGHSSRSECG
FCSNTSHDHLFCVYDGLLVNLTTIASWLSWLQYFSIPRYGFTALQHNEFLGQNFCPGLNA
TGNNPCNYATCRVILPPLSPIEQRTDGPRLTMALPSGKPILIYTPVSAALDSARLDALDL
KSRRTCPTWKYSEGSTESDTACHVVSGISTPVEEQAEKGDVFVILRGWGYCYIIGQRFHR
DNSVFPCSTALVEIHRRLDFLGALAVSIA

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_5|1890_bp
atgaaacctggtctcaacgccatcctgggacccacaggtggaggcaaatcttcgttatta
gatgtcttagctgcaaggaaagatccaagtggattatctggagatgttctgataaatgga
gcaccgcgacctgccaatttcaaatgtaattcaggttacgtggtacaagatgatgttgtg
atgggcactctgacggtgagagaaaacttacagttctcagcagctcttcggcttgcaaca
actatgacgaatcatgaaaaaaacgaacggattaacagggtcattcaagagttaggtctg
gataaagtggcagactccaaggttggaactcagtttatccgtggtgtgtctggaggagaa
agaaaaaggactagtataggaatggagcttatcactgatccttccatcttgttcttggat
gagcctacaactggcttagactcaagcacagcaaatgctgtccttttgctcctgaaaagg
atgtctaagcagggacgaacaatcatcttctccattcatcagcctcgatattccatcttc
aagttgtttgatagcctcaccttattggcctcaggaagacttatgttccacgggcctgct
caggaggccttgggatactttgaatcagctggttatcactgtgaggcctataataaccct
gcagacttcttcttggacatcattaatggagattccactgctgtggcattaaacagagaa
gaagactttaaagagatcatagagccttccaagcaggataagccactcatagaaaaatta
gcggagatttatgtcaactcctccttctacaaagagacaaaagctgaattacatcaactt
tccgggggtgagaagaagaagaagatcacagtcttcaaggagatcagctacaccacctcc
ttctgtcatcaactcagatgggtttccaagcgttcattcaaaaacttgctgggtaatccc
caggcctctatagctcagatcattgtcacagtcgtactgggactggttataggtgccatt
tactttgggctaaaaaatgattctactggaatccagaacagagctggggttctcttcttc
ctgacgaccaaccagtgtttcagcagtgtttcagccgtggaactctttgtggtagagaag
aagctcttcatgattgaagccaaaggcagatgccttcttcgttatgatgtttacccttat
gatggtggcttattcagccagttccatggcactggccatagcagcaggtcagagtgtggt
ttctgtagcaacacttctcatgaccatctgttttgtgtttatgatggtctgttggtcaat
ctcacaaccattgcatcttggctgtcatggcttcagtacttcagcattccacgatatgga
tttacggctttgcagcataatgaatttttgggacaaaacttctgcccaggactcaatgca
acaggaaacaatccttgtaactatgcaacctgcagagtcatccttccacccctgagcccc
atagaacagcgtacagatggtcctcgacttacgatggcgttaccttccggtaaacccata
ttaatttacactcctgtttctgcagctttagactctgcccgtttagatgccctggactta
aaaagtaggaggacgtgtccaacctggaagtacagtgagggttccactgagtctgatact
gcctgccacgtggtctctgggatttccacacctgtggaagagcaggcagagaaaggagat
gtgtttgtcatcctgagaggctggggttactgctacataattgggcagagatttcacaga
gataactcagtgtttccatgctccacggctctagttgaaattcataggcgtttggatttt
ctgggagcactggctgtctccattgcttaa

>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_6|252_aa
MVTTAPPALLPPALARSVCTCTWERKSGYSDLVLEVKLQNVQRKNQNQNSHQLFWNVDDY
LNGDAAIKHKSKVSWYFIAFKRLIHGLSCYIRFDRFVLRGPVLIIFRPKACLYGGFRVKL
ARCSRTPHHGSTVIWRTRPNSRQTGRDPITKGLYGLLVGLEYAGIWVYAPKGTTVPQGTP
VDGKEERRREKAVLLGLVAVTGRSAEAPGTLTHRLPSHKRCSHPEQVKWVVSGEWDSEKV
DACAPGPKKIRH

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_6|759_bp
atggtcaccactgctcccccagctcttctcccgcccgctttggccagatctgtatgcacc
tgcacgtgggagaggaaatcaggttatagtgacttagttctagaagtgaaattacaaaat
gtccagaggaaaaaccaaaatcaaaattctcatcagcttttttggaatgtagatgactat
ctgaatggtgatgctgctatcaaacacaaatcaaaagtatcatggtattttattgccttt
aaaaggttgatccatgggctttcatgttatatccgatttgacagatttgtcctgagaggt
ccagtgttgattatattcaggcccaaagcctgcttgtatggtggtttcagagttaaactg
gctaggtgctctaggaccccacatcatggcagcacagtgatctggagaacgcggcctaat
tcccgacagacaggaagagaccccatcaccaaagggctgtatgggctgcttgtgggactt
gagtatgcagggatttgggtatatgcacccaaagggaccactgtaccccaagggacccct
gtagatggaaaagaagaaaggagaagagaaaaagctgttctactgggtttggtcgccgtc
actggccggagcgccgaagcaccggggacgctgacgcacaggttgcccagtcacaagcgc
tgctcgcacccagagcaagttaaatgggtggtttctggtgaatgggattctgagaaagtg
gatgcttgcgccccagggcctaaaaaaatcaggcactga

>gi568815594r:87992237_88239995|GENSCAN_predicted_peptide_7|332_aa
MAPAKKSGEKKKGYSAINEGLTVSLRLECDGPVTAHYSPNLLDSVATYHGERNLCVGGGR
AQRLWDFALELSAALSQWKEHRAESMLMKTAFRPEITLKYLLSTFVPENLKATAGPKVCQ
LQTLKEKLTEKFPKSPPDPEAQPASSLTTTAQSFSDDNLMSYLTEKTEKRLWNWVTGRDW
NSLEGSEEDRKMWESLEFPRDLDGLEDRRMWESLELPGDFLNGFDQNADGDMDNKVQAEV
VSDGDEELLGNWSKGHSCYATRLVAFCPCPRDLWNFELERDDLGYLVEEIFKQQSIQEEA
EHKSLENLQPDDAIEKKTLILGRNSSTLKKFA

>gi568815594r:87992237_88239995|GENSCAN_predicted_CDS_7|999_bp
atggctcctgcaaagaaaagcggcgagaagaagaagggctattctgccataaacgagggt
ctcactgtttcactcaggttggagtgtgatggcccagttacagcacactacagccccaac
ctcctggactcagtggccacataccatggagagagaaatctgtgtgttgggggagggaga
gcacagcgattatgggacttcgcattggaactcagtgctgccctgtctcagtggaaagaa
cacagggcagaatcaatgctgatgaagacagcatttagaccagagattaccctgaaatac
ttactctctacttttgtaccagaaaatcttaaagccacagctggaccaaaggtatgccag
ctccaaactttaaaagaaaagctaacagaaaagttccccaagtccccacccgacccagaa
gcccagccagcttcatctctcaccaccacagcccagtcattctcagatgataaccttatg
tcctacttgactgagaaaactgaaaaacgactttggaactgggtaacaggcagagactgg
aacagtttggagggctcagaagaagacaggaaaatgtgggaaagtttggaatttcctaga
gatttggacggcttagaagacaggaggatgtgggaaagtttggaacttcctggagacttt
ttaaatggttttgaccaaaatgctgatggtgatatggacaataaagtgcaggctgaggtg
gtctcagatggagatgaggaacttcttgggaactggagtaaaggtcactcttgctatgca
acaagactggtggcattttgtccctgccctagagatctgtggaactttgaacttgagagg
gatgatttagggtatctggtggaagaaatttttaagcagcaaagcattcaagaggaagca
gagcataaaagtttggaaaacttgcagcctgatgatgcaatagaaaagaaaacccttatt
ctggggagaaattcaagcacactgaagaaatttgcataa