GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:48:34

Sequence gi568815576r:36411546_36626121 : 214576 bp : 49.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    352    347    6                               1.05
 1.07 Term -  10122   9725  398  1  2    0   50   236 0.462   6.24
 1.06 Intr -  16311  16209  103  0  1   76   96    58 0.116   5.15
 1.05 Intr -  32474  32371  104  0  2  136   85   -11 0.027   3.29
 1.04 Intr -  46380  46292   89  2  2    8  105    27 0.140  -3.99
 1.03 Intr -  51149  50956  194  2  2   32  116    85 0.536   3.99
 1.02 Intr -  52558  52373  186  1  0   31  103    96 0.272   5.29
 1.01 Init -  53809  53615  195  1  0   84   47   195 0.473  13.26
 1.00 Prom -  54149  54110   40                              -6.86

 2.14 PlyA -  55524  55519    6                               1.05
 2.13 Term -  56372  56259  114  2  0  105   48   281 0.997  24.37
 2.12 Intr -  65311  65188  124  0  1   63   64   172 0.896  12.89
 2.11 Intr -  69292  69030  263  1  2  137   79   154 0.876  15.69
 2.10 Intr -  69659  69603   57  2  0  106   47    72 0.876   3.98
 2.09 Intr -  75444  75382   63  0  0   23  108    60 0.003   0.41
 2.08 Intr -  78722  78643   80  0  2   82   80    86 0.005   6.47
 2.07 Intr -  82258  82088  171  2  0  136   93   170 0.999  22.21
 2.06 Intr -  84663  84422  242  2  2   90  105   336 0.998  32.69
 2.05 Intr -  86611  86446  166  2  1   82   64   203 0.997  16.32
 2.04 Intr -  89862  89696  167  2  2   92   99   286 0.995  29.70
 2.03 Intr -  92822  92553  270  1  0   61   78   535 0.999  46.46
 2.02 Intr -  93221  92970  252  1  0   99   96   282 0.997  26.65
 2.01 Init -  94877  94351  527  2  2   72  110  1121 0.998 105.03
 2.00 Prom -  98513  98474   40                              -6.46

 3.19 PlyA -  99337  99332    6                               1.05
 3.18 Term -  99455  99442   14  0  2  103   40     2 0.555  -4.74
 3.17 Intr - 100241  99958  284  1  2   92   93   587 0.781  56.66
 3.16 Intr - 101057 100915  143  2  2   55   72   211 0.998  15.35
 3.15 Intr - 105062 104933  130  1  1   81   84   216 0.945  21.20
 3.14 Intr - 105245 105160   86  2  2   84   94   110 0.997   9.82
 3.13 Intr - 105886 105756  131  2  2   76   77    91 0.947   7.21
 3.12 Intr - 107365 107218  148  1  1   99   91   179 0.998  19.11
 3.11 Intr - 107992 107860  133  0  1   98   75   276 0.999  27.95
 3.10 Intr - 109143 109031  113  0  2   64   77    96 0.968   5.28
 3.09 Intr - 111736 111664   73  0  1   80   95    32 0.856   2.51
 3.08 Intr - 112435 112350   86  1  2   17   78    90 0.503  -0.48
 3.07 Intr - 113187 113051  137  1  2   62   96   174 0.998  15.89
 3.06 Intr - 114164 114119   46  2  1  121  108    21 0.998   5.38
 3.05 Intr - 114586 114454  133  0  1   63   83   137 0.102  11.35
 3.04 Intr - 117779 117661  119  2  2  -13  -21   161 0.021  -5.64
 3.03 Intr - 124854 124751  104  1  2   62  116    45 0.452   4.59
 3.02 Intr - 125215 125064  152  0  2   90   71   171 0.473  15.41
 3.01 Init - 126059 125734  326  2  2   89  -89   560 0.345  35.20
 3.00 Prom - 127387 127348   40                              -4.16

 4.06 PlyA - 128078 128073    6                               1.05
 4.05 Term - 153341 152806  536  0  2  124   43  1010 0.999  94.51
 4.04 Intr - 154948 154808  141  2  0  124   92   184 0.990  22.72
 4.03 Intr - 176003 175920   84  0  0  118   75    90 0.879  10.49
 4.02 Intr - 176534 176427  108  0  0   83   49    54 0.626   1.26
 4.01 Init - 177191 177125   67  2  1   80   94    23 0.811   3.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  78722  78463  260  0  2   82   42   233 0.991  13.81
S.002 Init - 114576 114454  123  0  0   70   83   120 0.869  10.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:36411546_36626121|GENSCAN_predicted_peptide_1|422_aa
MAVSHAGCAHGILLVILFDQFQDTDLTGDAAGSGLSAHGHSLGATLGPMTVDGVGRHLLE
AFSHQCLPLPGARASSTPTPAAWGKLLQEAKVVLAKLRKSRMCGLWAGNGPENNVGAVSM
EGRMLATVFTILSPSCTISKLGLMTVPANEVTAQQVEARWHRLEVPEVLSVWLSPFPYPQ
PHLKQETPGFPRKALRDQLQLPELTEKVQGQPKEGTGLRSAGSSKLYHLFLDNPGYSLYL
KILNKILSAKFLLPCKVAYAYFIHEEMLPERGPDPDPKRGFLDLRQEIIQGVSHCAWPLA
DALKSINNAKKRGKRQVLIRPCSKVIVRFLTVMIKHDYTGEFEIIDGHRAGKIVVTVTGR
LNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARQNHTGGKILGF
FF

>gi568815576r:36411546_36626121|GENSCAN_predicted_CDS_1|1269_bp
atggccgtgagtcatgctggctgtgctcacggaatcctcctggtgatcctgtttgaccaa
ttccaggacactgacctcaccggggatgccgctggctctgggctgtcagcccacggtcat
tctctgggtgccacattgggccccatgactgtggatggggttggcagacacctgctggaa
gcctttagccaccagtgcctgcccctaccaggggccagggccagctcaacccccaccccg
gccgcctggggaaagctgctccaggaagcgaaggtagtgctggccaagctgcggaaatcc
cgaatgtgtgggctctgggcagggaacggcccagaaaacaatgttggggccgtgtccatg
gagggcaggatgctggcgacggttttcaccattttgagccccagttgcaccatctccaag
ttggggctcatgacagtccctgcaaatgaggtcacggctcagcaggtggaagcacgctgg
caccgattggaagttccagaagtgttatctgtgtggctttctcctttcccctacccccag
ccacatcttaaacaggaaacaccgggcttcccaaggaaggccctcagggaccagctccaa
ctgcctgagttgacagagaaggtccagggccagccaaaggaagggacaggcctgaggtca
gctgggtcttcgaaattatatcacctcttcctagataatccaggatactctctttatctc
aagattcttaacaaaatcctctcagcaaagttccttttgccatgtaaggtcgcttacgcc
tattttatacatgaagaaatgttaccagaaaggggtcctgatccagaccccaagagagga
ttcttggatctcaggcaagaaataattcagggcgtgagccactgcgcctggcccctggct
gatgccctcaagagcatcaacaatgccaaaaagagaggcaaacgccaggtgcttattagg
ccatgctccaaagtcatcgtccgatttctcactgtgatgataaagcatgattacactggc
gaatttgaaatcattgatggtcacagagctgggaaaattgttgtgactgtcacaggcagg
ctcaacaagtgtggagtgatcagccccagatttgatgtgcaactcaaagatctagaaaaa
tggcagaataatctgcttccatcccgccagtttggtttcattgtactgacaacctcagct
ggcatcatggaccatgaagaagcaagacaaaaccacacaggagggaaaatcctgggattc
tttttctag

>gi568815576r:36411546_36626121|GENSCAN_predicted_peptide_2|831_aa
MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE
RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP
DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV
ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH
MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP
KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF
GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV
TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL
ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP
TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES
CFLFALTRQKLPPFCQQGYLRMQGLQGRKKRAGDLGERILMYHSDQCGQYNSNFLEVAVG
RPIMCMAQRLLLRRFLASVISRKPSQGQWPPLTSRALQTPQCSPGGLTVTPNPARTIYTT
RISLTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAK
VDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG

>gi568815576r:36411546_36626121|GENSCAN_predicted_CDS_2|2496_bp
atgggcctctccgctgcggccccgttgtggggtcccccggggctgctcctggccatcgcc
ctgcacccagcgctgtcggtgcccccgcgccgggactactgcgtgctgggcgctgggccc
gcgggcctgcagatggcctacttcctgcagcgcgctggacgcgactacgcagtgttcgag
cgggccccgcggcccggcagcttcttcacacgctacccgcggcaccgcaagctcatcagc
atcaacaagcggtacacgggcaaggctaacgccgagttcaacctccgccacgactggaac
tctctgctcagccacgacccccggctgctcttcagacactactcgcgtgcctacttcccc
gacgcccgcgacatggtgcgctacctgggtgacttcgcggacacgctggggctccgtgtc
cagtacaacaccaccatcgcccacgtcactctggacaaggaccgacaggcctggaatggc
cactacttcatcctaactgaccagaagggccaggtgcatcagtgcagcgtcctctttgta
gccactggtttatcagtccccaaccaggttgacttccctggctccgaatatgcagagggt
tacgagtccgtgtccgtggaccctgaggactttgtaggccagaatgtgctgatcctgggt
cgtgggaactcggcctttgagacagcagagaacatcttgggtgtcacaaactttatccat
atgctcagccgctcccgggtccgtctgtcctgggccacccactacgttggagacctcaga
gccatcaacaatggcctgctggatacctaccagctcaagtccctggacgggctgctcgag
tctgacctgacggatctggccatcctgaaggacagcaaaggcaagttccatgtcaccccg
aaattcttcctggaagaagccaacaccaaccagagtgccgactccatcaccctcccccag
gacgacaatgacaactttgccatgcgcgtgccctatgaccgggtaatccgctgcctgggc
tggaactttgacttctccattttcaataagtccctcagacttaactcgggaaatgcattc
ggcaagaagtacccgctgattcgagctagctacgaatccaaaggaagccggggtctgttt
atcctgggtactgccagccactcggtggactaccggaaatctgctgggggcttcatccac
ggattccgatacacagtgcgtgctgttcaccggctcctggagcaccgccaccacagcgtc
acctggcccgccactgagctccccatcacacagctgaccagctccatcgtgcggcgcgtg
aatgaggcttctgggctctaccagatgttcggtgtgctggccgatgtcatcctgttgaag
gagaattccacggcctttgagtacctggaggagttccccatacagatgctggcccagctg
gagacactcacagggaggaaggcaaagcacgggctcttcgtcatcaacatggaatatggc
agaaatttctctggccccgacaaggacgtcttctttgatgaccggtctgtggggcacaca
gaagatgcctggcagtctaactttcttcatcctgtcatctactactatagatacctcccc
accgaacaggaggtgaggttccgccctgcacactggcccctgcctcggcccacggccatc
catcacatcgtggaagacttcttaacagactggactgccccgatcgggcacatcctacct
ctgaggcgcttcctggagaactgtttggacaccgatttgcgaagcttctatgcagagtcc
tgcttcctgttcgccctcacgcgccagaagttgccacccttttgccagcaggggtacctg
aggatgcagggactccaaggcagaaagaaacgggctggcgacctgggggaaaggatcctc
atgtaccacagcgaccaatgtgggcagtacaatagcaacttcctggaagttgctgtagga
agaccaataatgtgtatggctcagcgacttcttctgaggaggttcctggcctctgtcatc
tccaggaagccctctcagggtcagtggccacccctcacttccagagccctgcagacccca
caatgcagtcctggtggcctgactgtaacacccaacccagcccggacaatatacaccacg
aggatctccttgacaacctttaatatccaggatggacctgactttcaagaccgagtggtc
aacagtgagacaccagtggttgtggatttccacgcacagtggtgtggaccctgcaagatc
ctggggccgaggttagagaagatggtggccaagcagcacgggaaggtggtgatggccaag
gtggatattgatgaccacacagacctcgccattgagtatgaggtgtcagcggtgcccact
gtgctggccatgaagaatggggacgtggtggacaagtttgtgggcatcaaggatgaggat
cagttggaggccttcctgaagaagctgattggctga

>gi568815576r:36411546_36626121|GENSCAN_predicted_peptide_3|785_aa
MKCILVAIEGTEALFYWTDEEFEESLQLKFGQSENEEEELPALQDQLSPLLAPVIISSMT
MLEKLSDTYTCFSMENSNSLYVLHLFGECLFIAINGDHTKSEGDLQRKLLRPPDLGQRVQ
LWEHFQSLLWTYSRLREQEQCFAMEVITGRRSPQDLELSEIFEDSSFNPPLLLPQNYIEV
EQEGKAVEKNTALKANEDAWRNAVTDFRVDLRFTAREFFRPTQRKRESSLRQRRFWKMAK
FMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQF
GGGSQYAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQRNLRRDKDRRNMLQFNLQILP
KSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEMDFPQLMKMR
YLEVSEPQDIECCGALEYYDKAFDRITTRSEKPLRSIKRIFHTVTTTDDPVIRKLAKTQG
NVFATDAILATLMSCTRSVYSWDIVVQRVGSKLFFDKRDNSDFDLLTVSETANEPPQDEG
NSFNSPRNLAMEATYINHNFSQQCLRMGKERYNFPNPNPFVEDDMDKNEIASVAYRYRRW
KLGDDIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIAT
ELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLS
VENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSDEDEEEEEEEEEEE
EEEET

>gi568815576r:36411546_36626121|GENSCAN_predicted_CDS_3|2358_bp
atgaagtgcatcttggtggccattgagggcacagaggccctcttctactggacggatgag
gagtttgaagagagtctccagctgaagttcgggcagtcagagaatgaggaagaagagctc
cctgccctacaggaccagctcagccccctcctagccccggtcatcatctcctccatgacg
atgctggagaagctctcggacacctacacctgcttctccatggaaaacagcaactccctg
tatgtccttcacctgtttggagaatgcctgttcattgccatcaatggcgaccacaccaag
agcgagggggacctgcagcggaagctgctgcggcccccagacctggggcagcgtgtccag
ctgtgggagcactttcagagcctgctgtggacctatagccgcctgcgggagcaggaacag
tgcttcgccatggaggtgattactgggcgcaggagtccgcaggacttggagctgtcagaa
atctttgaagacagttccttcaaccctcccctcctcctcccacaaaattatattgaggtg
gaacaggaggggaaagcagtggagaagaacacagcgctaaaggctaatgaggacgcctgg
cgaaacgcagtaacggatttccgggtggaccttcgctttacggctcgtgagttcttccgc
ccaacccagaggaagcgggagagcagtttacgacagcgccgattttggaagatggcaaag
ttcatgacacccgtgatccaggacaacccctcaggctggggtccctgtgcggttcccgag
cagtttcgggatatgccctaccagccgttcagcaaaggagatcggctaggaaaggttgca
gactggacaggagccacataccaagataagaggtacacaaataagtactcctctcagttt
ggtggtggaagtcaatatgcttatttccatgaggaggatgaaagtagcttccagctggtg
gatacagcgcgcacacagaagacggcctaccagcggaatcgaatgagatttgcccagagg
aacctccgcagagacaaagatcgtcggaacatgttgcagttcaacctgcagatcctgcct
aagagtgccaaacagaaagagagagaacgcattcgactgcagaaaaagttccagaaacaa
tttggggttaggcagaaatgggatcagaaatcacagaaaccccgagactcttcagttgaa
gttcgtagtgattgggaagtgaaagaggaaatggattttcctcagttgatgaagatgcgc
tacttggaagtatcagagccacaggacattgagtgttgtggggccctagaatactacgac
aaagcctttgaccgcatcaccacgaggagtgagaagccactgcggagcatcaagcgcatc
ttccacactgtcaccaccacagacgaccctgtcatccgcaagctggcaaaaactcagggg
aatgtgtttgccactgatgccatcctggccacgctgatgagctgtacccgctcagtgtat
tcctgggatattgtcgtccagagagttgggtccaaactcttctttgacaagagagacaac
tctgactttgacctcctgacagtgagtgagactgccaatgagccccctcaagatgaaggt
aattccttcaattcaccccgcaacctggccatggaggcaacctacatcaaccacaatttc
tcccagcagtgcttgagaatggggaaggaaagatacaacttccccaacccaaacccgttt
gtggaggacgacatggataagaatgaaatcgcctctgttgcgtaccgttaccgcaggtgg
aagcttggagatgatattgaccttattgtccgttgtgagcacgatggcgtcatgactgga
gccaacggggaagtgtccttcatcaacatcaagacactcaatgagtgggattccaggcac
tgtaatggcgttgactggcgtcagaagctggactctcagcgaggggctgtcattgccacg
gagctgaagaacaacagctacaagttggcccggtggacctgctgtgctttgctggctgga
tctgagtacctcaagcttggttatgtgtctcggtaccacgtgaaagactcctcacgccac
gtcatcctaggcacccagcagttcaagcctaatgagtttgccagccagatcaacctgagc
gtggagaatgcctggggcattttacgctgcgtcattgacatctgcatgaagctggaggag
ggcaaatacctcatcctcaaggaccccaacaagcaggtcatccgtgtctacagcctccct
gatggcaccttcagctctgatgaagatgaggaggaagaggaggaggaagaagaggaagaa
gaagaggaagaaacttaa

>gi568815576r:36411546_36626121|GENSCAN_predicted_peptide_4|311_aa
MHQLSEPPRQSAREEFLLSPLSEQLAAGFGEFRAELQMGKCFAGSSKGLWQHLAAPVRGN
FKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASEFYKTRH
NIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFIIAEM
VGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHSRDA
SPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKDSLH
SNTANRRTTPV

>gi568815576r:36411546_36626121|GENSCAN_predicted_CDS_4|936_bp
atgcatcagctcagtgaacctccacgacaatctgccagggaagaattcttgttatcgcca
ctctcagagcagttggcggctgggtttggtgaattccgtgcggaattgcagatgggaaag
tgttttgcaggctcttctaaagggctgtggcagcatctggcagcaccagtgcgggggaat
ttcaaaggtctgtgcaagcaaattgatcacttcccagaggatgcagattacgaagctgac
acagcagaatatttcctccgggccgtgagggcctccagcattttcccaatcctgagtgtg
attctgcttttcatgggtggcctctgcatcgcagccagcgagttctacaaaactcgacac
aacatcatcctgagtgccggcatcttcttcgtgtctgcaggtctgagtaacatcattggc
atcatagtgtacatatctgccaatgccggagacccctccaagagcgactccaaaaagaat
agttactcatacggctggtccttctacttcggggccctgtccttcatcatcgccgagatg
gtcggggtgctggcggtgcacatgtttatcgaccggcacaaacagctgcgggccacggcc
cgcgccacggactacctccaggcctctgccatcacccgcatccccagctaccgctaccgc
taccagcgccgcagccgctccagctcgcgctccacggagccctcacactccagggacgcc
tcccccgtgggcatcaagggcttcaacaccctgccgtccacggagatctccatgtacacg
ctcagcagggaccccctgaaggccgccaccacgcccaccgccacctacaactccgacagg
gataacagcttcctccaggttcacaactgtatccagaaggagaacaaggactctctccac
tccaacacagccaaccgccggaccacccccgtataa