GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:34:36

Sequence gi568815597r:244754453_244964307 : 209855 bp : 43.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    906    901    6                               1.05
 1.02 Term -  12795  12593  203  1  2   36   32   143 0.769   1.05
 1.01 Init -  12951  12873   79  0  1   79   87    27 0.774   2.92
 1.00 Prom -  15440  15401   40                              -2.96

 2.06 PlyA -  15619  15614    6                               1.05
 2.05 Term -  24393  24302   92  1  2   80   36   138 0.658   5.68
 2.04 Intr -  28840  28687  154  1  1   21   83   140 0.446   6.45
 2.03 Intr -  31590  31448  143  1  2   45   84    22 0.036  -2.43
 2.02 Intr -  46383  46199  185  2  2   14   86   159 0.077   7.73
 2.01 Init -  52088  52078   11  2  2   68   77    15 0.092  -2.19
 2.00 Prom -  52795  52756   40                              -3.66

 3.03 PlyA -  53121  53116    6                               1.05
 3.02 Term -  55922  55686  237  2  0   80   50   154 0.904   6.97
 3.01 Init -  63635  63618   18  2  0   59  100    -6 0.184  -2.12
 3.00 Prom -  68711  68672   40                              -1.76

 4.00 Prom +  77574  77613   40                              -5.66
 4.01 Init +  80630  80748  119  1  2   52   60   145 0.964   7.77
 4.02 Term +  81024  81114   91  0  1  116   49    88 0.921   4.89
 4.03 PlyA +  82071  82076    6                               1.05

 5.04 PlyA -  82976  82971    6                               1.05
 5.03 Term -  86628  86608   21  0  0  104   42    17 0.200  -2.99
 5.02 Intr - 100592 100521   72  2  0   67   78    86 0.941   5.10
 5.01 Init - 101118 100972  147  0  0   94   95    84 0.920   9.79
 5.00 Prom - 101211 101172   40                              -5.86

 6.09 PlyA - 101548 101543    6                               1.05
 6.08 Term - 102173 101991  183  2  0   51   31   112 0.680  -0.66
 6.07 Intr - 102404 102276  129  2  0    3  101    81 0.735   1.79
 6.06 Intr - 103265 103146  120  2  0  101  115    65 0.988  11.19
 6.05 Intr - 103822 103559  264  1  0  100   72   274 0.999  24.71
 6.04 Intr - 104389 104277  113  2  2   60   87    83 0.991   5.50
 6.03 Intr - 108082 108009   74  0  2   43   89    87 0.997   3.35
 6.02 Intr - 108278 108167  112  0  1   92   80   128 0.982  11.84
 6.01 Init - 109855 109165  691  1  1   84  100  1073 0.493 103.32
 6.00 Prom - 111103 111064   40                              -4.46

 7.00 Prom + 117109 117148   40                              -1.36
 7.01 Init + 150153 150204   52  2  1   56  105    86 0.684   8.42
 7.02 Term + 165003 165163  161  1  2   68   44    89 0.236   0.60
 7.03 PlyA + 165304 165309    6                               1.05

 8.03 PlyA - 165331 165326    6                               1.05
 8.02 Term - 176413 176295  119  2  2  111   49    74 0.964   4.50
 8.01 Init - 178294 178225   70  1  1   77   68    44 0.900   2.51
 8.00 Prom - 201918 201879   40                              -3.06


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_1|93_aa
MAVVTKSLDHNTQVPSDMHKAFLRRTGITTLQENMPSPNELHKEPETHPEEAEIFDFLDT
EFKTAVLRKLKEIQENTEKGFRILSDKFNKELK

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_1|282_bp
atggctgtagtgaccaaaagcttagatcacaacactcaagtcccatctgatatgcacaaa
gccttcctaagaaggacaggcatcacgaccctgcaggaaaacatgccctcaccaaatgag
ctacataaggaaccagagacccatcctgaagaagcagagatatttgactttttggacaca
gaattcaaaacagctgttttgaggaaactcaaagaaattcaagagaacacagagaaggga
ttcagaattctatcagataaatttaacaaagaattgaaataa

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_2|194_aa
MLASYDFKSPKLQVSPLFLILTIYLLKNLNPLTCEISHNLDVADEVFSVEFNVFWISYDV
AAGSQESKLRQVVDDAEEHLLFLASGKESVRPSFSSLRFFHQASEEQGLQFSGTFLSTKL
HTFVSTRHVAAVNARGHRDMAVTQTEKTPTPNGILEGGQTINKVKITANKYKKDESERER
DRERKNYTRYGRRL

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_2|585_bp
atgttggccagttatgattttaagtctccgaagctacaagtttcccctctctttcttatt
ctgacaatttatctgttgaaaaacctgaatcctttgacctgtgaaatttcccacaatctg
gatgttgctgatgaagtattctcggtggaattcaatgtgttctggatttcctacgatgta
gcagctggatcccaagaaagcaaactaagacaggtggttgatgatgcagaagagcatcta
ctttttctagcttcaggaaaagagagcgtacgtccctccttctcatctttaagattcttt
caccaggcatcagaagagcagggcctgcagttttcagggaccttcctgtccacgaaactg
cacacatttgtgagcactcgccacgtggctgccgtgaacgcccgtggacatcgggacatg
gcagtgacccaaacagaaaaaacccccactcccaatggcattttagaggggggacagaca
attaacaaggttaaaataacagcaaataagtacaagaaagatgagagcgagagagagaga
gaccgtgagcgcaagaattacacccggtatggaagacgactctaa

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_3|84_aa
MFIHSKLQPPSTGPWLPASACGLIPFPERQTLLPNSLPGDSPRASHRRFDLTSFKLSASI
VFATKPPSLLCSSYSGLISVRQNS

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_3|255_bp
atgttcatacacagcaagctgcagccgccatccacaggcccgtggcttccggcgtcagcc
tgtggcctcatcccctttcctgaacgccagacgctgctgccaaactccctgcccggcgac
tctccccgcgcctctcacaggcgcttcgacttgacatctttcaaactcagcgcatccatc
gtctttgccaccaaacctccctctctgctgtgttcctcctactctggcctcatttccgtt
cgtcaaaattcctga

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_4|69_aa
MAAGAEWGCPGTKGSSRGRKDKGHLGDEGRRASAERLPGRLCAELGRKCDPFDGTKDMTA
RPRAATAER

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_4|210_bp
atggctgctggtgcagagtggggctgccccggcaccaagggctcgtcccgtggccggaag
gacaaaggacacttaggggacgagggccgccgagccagcgcggagcgccttccgggtcgg
ctgtgtgccgagcttggaagaaagtgtgacccgttcgacggaacaaaggacatgacagcc
cggccccgtgcggccactgcggagcgttag

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_5|79_aa
MPQRGGGGGGSGGIGYPYPRAPVFPGRGSYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGY
KNQSQGYNQWQQGGGKTDI

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_5|240_bp
atgccacagagaggtggtggcggtggaggaagtggtggaatcggctatccataccctcgt
gcccctgtttttcctggccgtggtagttactcaaacagagggaactacaacagaggtgga
atgcccaacagagggaactacaaccagaacttcagaggacgaggaaacaatcgtggctac
aaaaatcaatctcagggctacaaccagtggcagcagggtggcggcaagacagacatttaa

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_6|561_aa
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDDEEAGGRPAMEPGNGSL
DLGGDSAGRSGAGLEQEAAAGGDEEEEEEEEEEEGISALDGDQMELGEENGAAGAADSGP
MEEEEAASEDENGDDQGFQEGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAA
KEAAGKSSGPTSLFAVTVAPPGARQGQQQAGGKKKAEGGGGGGRPGAPAAGDGKTEQKGG
DKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTCEEEFSYG
YSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKEVLA
GRPLFPHVLCHNCAVEFNFGQKEKPYFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVV
MMIGLPGAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAP
QCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKK
AEVEGKDLPEHAVLKMKGMEF

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_6|1686_bp
atgagttcctcgcctgttaatgtaaaaaagctgaaggtgtcggagctgaaagaggagctc
aagaagcgacgcctttctgacaagggtctcaaggccgagctcatggagcgactccaggct
gcgctggacgacgaggaggccgggggccgccccgccatggagcccgggaacggcagccta
gacctgggcggggattccgctgggcgctcgggagcaggcctcgagcaggaggccgcggcc
ggcggcgatgaagaggaggaggaagaggaagaggaggaggaaggaatctccgctctggac
ggcgaccagatggagctaggagaggagaacggggccgcgggggcggccgactcgggcccg
atggaggaggaggaggccgcctcggaagacgagaacggcgacgatcagggtttccaggaa
ggggaagatgagctcggggacgaagaggaaggcgcgggcgacgagaacgggcacggggag
cagcagcctcaaccgccggcgacgcagcagcaacagccccaacagcagcgcggggccgcc
aaggaggccgcggggaagagcagcggccccacctcgctgttcgcggtgacggtggcgccg
cccggggcgaggcagggccagcagcaggcgggaggtaagaagaaggcggaaggcggcgga
ggcggcggtcgccccggggctccggcggcgggggacggcaaaacagaacagaaaggcgga
gataaaaagaggggtgttaaaagaccacgagaagatcatggccgtggatattttgagtac
attgaagagaacaagtatagcagagccaaatctcctcagccacctgttgaagaagaagat
gaacacttcgatgacacagtggtttgtcttgatacttgtgaagaagaattttcttatggg
tattctctaaaaggaataaaaacatgcaactgtgagactgaagattatggagaaaagttt
gatgaaaatgatgtgattacatgttttgctaactttgaaagtgatgaagtagaactctcg
tatgctaagaatggacaagatcttggcgttgccttcaaaatcagtaaggaagttcttgct
ggacggccactgttcccgcatgttctctgccacaactgtgcagttgaatttaattttggt
cagaaggaaaagccatattttccaatacctgaagagtatactttcatccagaacgtcccc
ttagaggatcgagttagaggaccaaaggggcctgaagagaagaaagattgtgaagttgtg
atgatgattggcttgccaggagctggaaaaactacctgggttactaaacatgcagcagaa
aatccagggaaatataacattcttggcacaaatactattatggataagatgatggtggca
ggttttaagaagcaaatggcagatactggaaaactgaacacactgttgcagagagccccc
cagtgtcttgggaaatttattgagattgctgcccgaaagaagcgaaattttattctggat
cagacaaatgtgtctgctgctgcccagaggagaaaaatgtgcctgtttgcaggcttccag
cgaaaagctgttgtagtttgcccaaaagatgaagactataagcaaagaacacagaagaaa
gcagaagtagaggggaaagacctaccagaacatgcggtcctcaaaatgaaaggcatggaa
ttttaa

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_7|70_aa
MLKTEKSKMKALANSVSGCRLPTVSHPVRIIPAGVSLRDVKIDQWARILSTRYVHYKVLL
QLFTCGFSSH

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_7|213_bp
atgctgaaaacagaaaagtccaagatgaaggcgctggcaaattccgtgtctggctgcaga
cttcctactgtgtcacatccagtgcgcatcatacctgctggggtgtctctcagggatgtt
aagattgatcagtgggctcggatcctgtcaacccgatatgtccattataaagttctcctt
cagctcttcacctgtggtttcagcagccattga

>gi568815597r:244754453_244964307|GENSCAN_predicted_peptide_8|62_aa
MNFLSTDKDIFKGSSCLDFLVTAEHVTKVDSATLEISCPIPLKLIVPKLRISSGMCSLLP
EE

>gi568815597r:244754453_244964307|GENSCAN_predicted_CDS_8|189_bp
atgaacttcctctccactgacaaggacatctttaaaggaagttcttgtctggatttctta
gtgactgcagagcatgtaaccaaggtggattcagctacactggagatcagttgccccatc
cccctgaagttgattgtgcccaagttaagaatatctagtggaatgtgttccttgttacct
gaggagtga