GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:27:15

Sequence gi568815591r:76229580_76458808 : 229229 bp : 50.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5449   5720  272  0  2  113   72   409 0.720  38.14
 1.02 Intr +  18609  18710  102  0  0  133   84   132 0.674  16.59
 1.03 Intr +  30217  30303   87  1  0   87   77    34 0.689   1.29
 1.04 Intr +  30327  30455  129  0  0   53   76   257 0.668  20.81
 1.05 Intr +  30538  30618   81  1  0  140   97    64 0.999  11.25
 1.06 Intr +  31773  31835   63  0  0   87   80   120 0.981   8.93
 1.07 Intr +  35186  35236   51  2  0  113   99    56 0.954   7.22
 1.08 Intr +  37679  37904  226  2  1   57   40   183 0.573   8.39
 1.09 Intr +  44505  44621  117  2  0   69   77    71 0.587   4.76
 1.10 Intr +  51862  52223  362  0  2  111  101   140 0.808  11.62
 1.11 Intr +  53069  53293  225  2  0  101  117   142 0.998  15.50
 1.12 Intr +  53385  53522  138  0  0   96   80   168 0.984  16.38
 1.13 Term +  56036  56264  229  2  1   97   52   236 0.905  17.00
 1.14 PlyA +  57687  57692    6                               1.05

 2.00 Prom +  73059  73098   40                              -6.86
 2.01 Init +  73134  73497  364  2  1  102  105   742 0.678  72.51
 2.02 Intr +  74223  74286   64  1  1  118   94   144 0.999  15.78
 2.03 Term +  74405  74594  190  2  1   94   42   288 0.965  21.72
 2.04 PlyA +  74692  74697    6                               1.05

 3.05 PlyA -  75643  75638    6                               1.05
 3.04 Term - 100654  99998  657  1  0  113   48  1256 0.999 118.05
 3.03 Intr - 129245 129143  103  1  1  100   92   291 0.633  30.88
 3.02 Intr - 145905 145798  108  2  0   40   47   109 0.195   1.40
 3.01 Init - 153855 153713  143  0  2   83   70    65 0.347   3.81
 3.00 Prom - 157707 157668   40                              -6.46

 4.11 PlyA - 159783 159778    6                               1.05
 4.10 Term - 160796 160480  317  0  2  116   46   277 0.999  21.40
 4.09 Intr - 162462 162385   78  1  0   88   90    27 0.836   2.42
 4.08 Intr - 164137 163808  330  2  0  111  100   563 0.577  55.40
 4.07 Intr - 164325 164251   75  1  0   75  106    14 0.652   1.39
 4.06 Intr - 165751 165674   78  2  0  134   60    -5 0.481   0.82
 4.05 Intr - 168253 167939  315  2  0   95   80   506 0.909  46.54
 4.04 Intr - 169218 169141   78  1  0   99   68    47 0.695   3.32
 4.03 Intr - 171012 170707  306  1  0   78  101   411 0.947  37.82
 4.02 Intr - 178795 178631  165  2  0   73  103    50 0.612   4.93
 4.01 Init - 179424 179415   10  0  1   65   98    -1 0.566  -0.76
 4.00 Prom - 187250 187211   40                              -3.56

 5.00 Prom + 189555 189594   40                              -6.46
 5.01 Init + 193737 193793   57  2  0   60   91     0 0.358  -1.15
 5.02 Intr + 195473 195697  225  1  0  110  110   236 0.693  26.18
 5.03 Intr + 199936 200054  119  0  2   97   67   228 0.983  20.86
 5.04 Intr + 203348 203451  104  2  2   79   90    97 0.910   8.82
 5.05 Intr + 203891 204068  178  0  1   58   80   208 0.999  15.98
 5.06 Intr + 204459 204576  118  0  1   87   95    88 0.992   9.87
 5.07 Intr + 210671 210762   92  1  2   71   94   122 0.997   9.89
 5.08 Intr + 210896 211032  137  2  2   77   80    37 0.898   2.01
 5.09 Term + 212263 212477  215  2  2   85   42   146 0.824   7.09
 5.10 PlyA + 216156 216161    6                               1.05

 6.02 PlyA - 216569 216564    6                               1.05
 6.01 Term - 226221 226089  133  2  1  104   40    79 0.478   2.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:76229580_76458808|GENSCAN_predicted_peptide_1|693_aa
GQRPRPAAPGPATMSSTVNNGAASMQSTPDAANGFPQPSSSSGTWPRAEEELRAAEPGLV
KRAHREILDHERKRRVELKCMELQEMMEEQGYSEEEIRQKVGTFRQMLMEKEGVLTREDR
PGGHIRVAARRLAGLGQAPCAEKRGEEKSSRDWCVAETPRLTEGAEPGLEYAPFDDDDGP
VDCDCPASCYRGHRGYRTKHWSSSSASPPPKKKKKKKGGHRRSRCGSSSPLRKKKKSVKK
HRRDRSRSSKCKRKEKNKEKKRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNG
GSGQRSGAHGGRPGSAHSPPDVRTLRFAEGSRAAGCAPPGLRSPRWPSGPFRAKGSDRGA
SAGPPGLQILEEVLAKKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAA
GGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPG
PGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWS
SSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPI
RKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPGHSHGSY
SSRSHGTRSRTRSPSRTPSPSYHSRSSSESGGF

>gi568815591r:76229580_76458808|GENSCAN_predicted_CDS_1|2082_bp
ggccagcggcccaggccagcggctccagggccagccacgatgtcctccaccgtgaacaac
ggggcggccagcatgcagtccacacccgacgccgcgaacggcttcccgcagcccagctcc
tcctcggggacctggccgcgggcggaagaggagctgcgcgccgcggagccgggcctggtg
aagcgcgcgcaccgcgagatcctggaccacgagcgcaagcggcgggtggagctcaagtgc
atggagctgcaggagatgatggaggagcaggggtattcggaggaggagattcggcagaaa
gtggggacattccggcagatgctgatggagaaggagggagtgctcaccagggaggaccgg
cctgggggccacatccgggtagcagcccgcagacttgcggggctaggtcaggccccctgc
gccgagaaaaggggtgaagaaaagtcgtcccgagactggtgtgtggcggagaccccgcgg
ctgaccgagggcgctgagccgggcctggagtacgcgccctttgacgatgacgacggccca
gtggactgtgactgcccggcctcctgctaccgcggccaccgcgggtacaggaccaagcat
tggtctagcagctcggcatcgccccctcccaagaaaaagaagaaaaagaaaggcggccac
cggagaagccgctgtgggagctcctcacccctccgcaagaagaagaagagtgtgaagaag
catcgccgagacagatctcgaagctccaagtgcaaaagaaaagagaagaacaaagagaag
aagaggctgagccccaagcaccgagacgaagggcgaaagacgggcagccagcggtccagc
ggaagccggtcgccttccccgtcgggcggcagcggatgggggtcgccccagcggaacggc
ggcagcgggcagcggagcggagcgcacgggggccgccccggctcggcgcacagcccgccc
gatgtacgtacgcttcgctttgcggagggttcccgcgccgcgggctgcgcccccccggga
cttcggtcaccccgctggccttcagggccctttcgggcaaaaggcagtgacagaggagcc
agtgcggggcctcctggccttcagatcctggaggaagttctggccaagaagcccagctcg
ccctcgcccagggtccgtgacaaggcggcggccgccgcacccacgccgcccgcgcggggg
aaggagagcccgagcccgcgctcggcgccgtcgtcccaaggtcgcggaggccgcgcggcg
ggcggggcgggcaggcggcggcggcggcggcgtaggcggcggcgctcgcggtcctcggcg
tccgcgccccgccgcaggggtcgccggcgcccccggcccgcgcccccccggggctcgtcg
cgctcgctcagcagggcccgctccagcagcgactccggcagcggccgcggcgcccccggc
cccgggcccgagcccggctctgagcgaggccacggcggacacgggaaacgggccaaggag
cggcccccgcgcgcgcggcccgccagcacctctccgtccccgggcgcgcacggccggcgc
ggcggcccagaagggaagagctcgtcgcgcagccccggcccgcacccccgctcctggagc
tccagccgctcgccctccaaatctcgctcgcgctctgcggagaagcggccccacagcccc
agccgctcgccgtcgcccaagaagcccctcagccgggacaaggacggcgagggccgcgca
aggcactctgaggccgaggccacccgcgcccggcgccgctcccgcagctactcgcccatc
cgcaagcggcgccgggactcgccaagcttcatggagccgcggcgcatcaccagcgcccgc
aagcgtcctattccatactaccggcccagcccctcttcctcctccagctgcttgagcagc
gactactcgacccggagccacagccgcagccccagccccggccacagccacgggagctac
agcagtcgcagccatgggacccgcagccggacacgcagcccctcgaggacccccagtccc
agctaccacagccggagcagctctgagagcgggggcttctga

>gi568815591r:76229580_76458808|GENSCAN_predicted_peptide_2|205_aa
MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPP
AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEI
TGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEIT
IPVTFESRAQLGGPEAAKSDETAAK

>gi568815591r:76229580_76458808|GENSCAN_predicted_CDS_2|618_bp
atgaccgagcgccgcgtccccttctcgctcctgcggggccccagctgggaccccttccgc
gactggtacccgcatagccgcctcttcgaccaggccttcgggctgccccggctgccggag
gagtggtcgcagtggttaggcggcagcagctggccaggctacgtgcgccccctgcccccc
gccgccatcgagagccccgcagtggccgcgcccgcctacagccgcgcgctcagccggcaa
ctcagcagcggggtctcggagatccggcacactgcggaccgctggcgcgtgtccctggat
gtcaaccacttcgccccggacgagctgacggtcaagaccaaggatggcgtggtggagatc
accggcaagcacgaggagcggcaggacgagcatggctacatctcccggtgcttcacgcgg
aaatacacgctgccccccggtgtggaccccacccaagtttcctcctccctgtcccctgag
ggcacactgaccgtggaggcccccatgcccaagctagccacgcagtccaacgagatcacc
atcccagtcaccttcgagtcgcgggcccagcttgggggcccagaagctgcaaaatccgat
gagactgccgccaagtaa

>gi568815591r:76229580_76458808|GENSCAN_predicted_peptide_3|336_aa
MAMNLLAMKRFGKCYSRSFNGNLAWPAEEPRSVVIGAKKNVLTNQRSRVTPLGFLQQFVQ
MEEMPQLPGLVASTFPEQLSFLRRPSPAKMVDREQLVQKARLAEQAERYDDMAAAMKNVT
ELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEK
ELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSE
KAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTL
NEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGEGNN

>gi568815591r:76229580_76458808|GENSCAN_predicted_CDS_3|1011_bp
atggccatgaaccttttggctatgaaacggtttgggaagtgctattccaggtccttcaac
ggaaacttagcctggcctgcagaagaaccacggagcgttgtgattggagcaaagaagaat
gtgctaacgaatcagagaagccgggtcaccccgctgggctttctgcagcagtttgtgcag
atggaagagatgccccagctacctggcctggtggcctccaccttccctgagcagctgtct
ttcttgcgcagacccagccccgcgaagatggtggaccgcgagcaactggtgcagaaagcc
cggctggccgagcaggcggagcgctacgacgacatggccgcggccatgaagaacgtgaca
gagctgaatgagccactgtcgaatgaggaacgaaaccttctgtctgtggcctacaagaac
gttgtgggggcacgccgctcttcctggagggtcatcagtagcattgagcagaagacatct
gcagacggcaatgagaagaagattgagatggtccgtgcgtaccgggagaagatagagaag
gagttggaggctgtgtgccaggatgtgctgagcctgctggataactacctgatcaagaat
tgcagcgagacccagtacgagagcaaagtgttctacctgaagatgaaaggggactactac
cgctacctggctgaagtggccaccggagagaaaagggcgacggtggtggagtcctccgag
aaggcctacagcgaagcccacgagatcagcaaagagcacatgcagcccacccaccccatc
cgattaggcctggctcttaactactccgtcttctactatgagatccagaacgccccagag
caagcgtgccacttggccaagaccgcgttcgacgacgccatcgccgagcttgacaccctc
aacgaggactcctacaaggactccacgctcatcatgcagctcctccgcgacaacctcacg
ctctggacgagcgaccagcaggacgacgatggcggcgaaggcaacaattaa

>gi568815591r:76229580_76458808|GENSCAN_predicted_peptide_4|583_aa
MIRAPISQLSPVQAEGGQKVIIPLGAVLGPMNGVLKSLCLHPDRLSSSPQPDFVHQGTEL
RLVGGPSRCRGRLEVMHGGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAFGQGRG
PILLDNVECRGQEAALSECGSRGWGVHNCFHYEDVAVLCDEFLPTQPPTRKMLTSRAPPT
TLPNGKSEGSVRLVGGANLCQGRVEILHSGLWGTVCDDDWGLPDAAVVCRQLGCGAAMAA
TTNAFFGYGTGHILLDNVHCEGGEPRLAACQSLGWGVHNCGHHEDAGALCAGLGPPTLTA
LPSSATREDWAWQTDPSATGVGPQPSRETALLTTAAWAAGKKSGRLRLVGGPGPCRGRVE
VLHAGGWGTVCDDDWDFADARVACREAGCGPALGATGLGHFGYGRGPVLLDNVGCAGTEA
RLSDCFHLGWGQHNCGHHEDAGALCAGEADSEGPEELGLQVQQDGSETTRVPTPRPRDGH
LRLVNGAHRCEGRVELYLGQRWGTVCDDAWDLRAAGVLCRQLGCGQALAAPGEAHFGPGR
GPILLDNVKCRGEESALLLCSHIRWDAHNCDHSEDASVLCQPS

>gi568815591r:76229580_76458808|GENSCAN_predicted_CDS_4|1752_bp
atgataagggctcccatctcccagctgtccccagtccaggcagaaggaggacaaaaggtg
attattccactgggggctgtcctgggccccatgaatggggtgttgaaatccctgtgtctg
catccagataggctttcatcttctccccaaccagactttgtacaccagggcacagagctg
aggctggtggggggccccagccgctgccggggccgcctggaagtcatgcacggtggctcc
tggggcagcgtctgtgatgacgactgggacgtggtggacgccaacgtagtgtgtcgccag
ctgggctgtggcctggcactgcccgtgccacggccccttgcctttggccaaggccgaggc
cccatcctgctggacaacgtggagtgccgcgggcaggaagctgcgctgagcgagtgcggc
agccgcggctggggcgtccacaattgctttcactacgaggatgtggctgtcctgtgtgat
gaattcttgccaacgcagcccccaacaaggaagatgttaaccagtagagcacctcctacg
acactgccgaatggaaaaagtgagggcagcgtacgcctggtagggggcgcgaacctgtgt
cagggccgagtggagatcctgcacagtggcctgtggggcaccgtgtgtgacgacgactgg
gggctgccggatgccgctgtggtctgtcgtcagctgggctgcggggcggccatggccgcc
accaccaacgccttcttcggctatggcaccggacacatcctgctggacaacgtgcactgc
gaaggcggcgagccccgcctggcagcctgccagagcctgggctggggtgtgcacaactgc
ggccaccacgaggacgcgggcgcgctctgcgcaggcctgggtcccccaacgctcacagca
ctgccatcctcagccacaagagaggactgggcttggcagacagatccgtccgctacagga
gttggcccccagccttcccgggagacagcactgctcaccaccgccgcctgggccgcgggg
aagaaaagtggacggctgcgactggtgggcggcccgggtccgtgccgcggccgcgtggag
gtgttgcacgccgggggctggggcaccgtgtgcgacgatgactgggactttgcggacgcg
cgcgtggcctgccgcgaagcgggctgcgggcctgcgctgggcgctacgggactgggccac
ttcggctacggccgcggccccgtgctgctggacaacgtgggctgcgccggcaccgaggct
cgcctgagcgactgcttccacctgggctggggccagcacaactgcggccaccacgaggac
gcgggagcgctctgcgcaggtgaggctgacagcgaaggcccagaggagctgggactgcaa
gtccagcaggatggttctgagaccacgcgggtgcccactcctcggcccagggacgggcat
ctacgtctggtcaatggagcccaccgatgcgagggacgtgtagagctctacctagggcaa
cggtggggcactgtctgtgatgatgcttgggacctgcgggcagccggtgtcctgtgccgc
cagctgggctgtggccaggccctcgcagcccctggcgaggctcactttggcccaggccga
ggccccattctcctggacaatgtcaagtgccgtggggaagaaagtgctctgctgctctgc
tctcatatccgctgggatgcccacaactgtgaccacagcgaggatgccagtgtcctgtgc
cagccttcatga

>gi568815591r:76229580_76458808|GENSCAN_predicted_peptide_5|414_aa
MGIYIRDRACRLCWAKHVKGGASHPETSVQPVLVECQEATLMVMVSKDLFGTGKLIRAAD
LTLGPEACEPLVSMDTEDVVRFEVGLHECGNSMQVTDDALVYSTFLLHDPRPVGNLSIVR
TNRAEIPIECRYPRQGNVSSQAILPTWLPFRTTVFSEEKLTFSLRLMEENWNAEKRSPTF
HLGDAAHLQAEIHTGSHVPLRLFVDHCVATPTPDQNASPYHTIVDFHGCLVDGLTDASSA
FKVPRPGPDTLQFTVDVFHFANDSRNMIYITCHLKVTLAEQDPDELNKACSFSKPSNSWF
PVEGSADICQCCNKGDCGTPSHSRRQPHVMSQWSRSASRNRRHVTEEADVTVGPLIFLDR
RGDHEVEQWALPSDTSVVLLGVGLAVVVSLTLTAVILVLTRRCRTASHPVSASE

>gi568815591r:76229580_76458808|GENSCAN_predicted_CDS_5|1245_bp
atgggaatttacatcagggatagggcatgccggctgtgctgggcaaagcacgtgaagggt
ggagccagccatcctgagacgtccgtacagcccgtactggtggagtgtcaggaggccact
ctgatggtcatggtcagcaaagacctttttggcaccgggaagctcatcagggctgctgac
ctcaccttgggcccagaggcctgtgagcctctggtctccatggacacagaagatgtggtc
aggtttgaggttggactccacgagtgtggcaacagcatgcaggtaactgacgatgccctg
gtgtacagcaccttcctgctccatgacccccgccccgtgggaaacctgtccatcgtgagg
actaaccgcgcagagattcccatcgagtgccgctaccccaggcagggcaatgtgagcagc
caggccatcctgcccacctggttgcccttcaggaccacggtgttctcagaggagaagctg
actttctctctgcgtctgatggaggagaactggaacgctgagaagaggtcccccaccttc
cacctgggagatgcagcccacctccaggcagaaatccacactggcagccacgtgccactg
cggttgtttgtggaccactgcgtggccacaccgacaccagaccagaatgcctccccttat
cacaccatcgtggacttccatggctgtcttgtcgacggtctcactgatgcctcttctgca
ttcaaagttcctcgacccgggccagatacactccagttcacagtggatgtcttccacttt
gctaatgactccagaaacatgatatacatcacctgccacctgaaggtcaccctagctgag
caggacccagatgaactcaacaaggcctgttccttcagcaagccttccaacagctggttc
ccagtggaaggctcggctgacatctgtcaatgctgtaacaaaggtgactgtggcactcca
agccattccaggaggcagcctcatgtcatgagccagtggtccaggtctgcttcccgtaac
cgcaggcatgtgacagaagaagcagatgtcaccgtggggccactgatcttcctggacagg
aggggtgaccatgaagtagagcagtgggctttgccttctgacacctcagtggtgctgctg
ggcgtaggcctggctgtggtggtgtccctgactctgactgctgttatcctggttctcacc
aggaggtgtcgcactgcctcccaccctgtgtctgcttccgaataa

>gi568815591r:76229580_76458808|GENSCAN_predicted_peptide_6|44_aa
XSHLGPELAPSPETPGDVHSSEIMSKAAVASNQPIPPGCQMEAN

>gi568815591r:76229580_76458808|GENSCAN_predicted_CDS_6|135_bp
nngtcacacctgggtcctgagctggcgccatcaccggagacgccaggtgatgtccattca
tcagaaataatgagcaaagcagctgtggcttctaatcagcccatccctccagggtgtcag
atggaggccaattag