GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:20:13

Sequence gi568815581r:57905750_58107137 : 201388 bp : 45.43% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6293   6487  195  0  0   64   77    93 0.453   5.19
 1.02 Intr +   7729   7809   81  2  0   28  108    54 0.513   1.01
 1.03 Term +   7936   8000   65  2  2   73   37    58 0.600  -2.75
 1.04 PlyA +   9125   9130    6                               1.05

 2.00 Prom +  12670  12709   40                              -1.56
 2.01 Init +  13831  13883   53  0  2   88   92    36 0.926   4.63
 2.02 Intr +  20476  20586  111  1  0   45   86    84 0.303   3.39
 2.03 Intr +  28228  28275   48  1  0   93   81    27 0.034   0.30
 2.04 Intr +  34744  34859  116  1  2  102   -7    91 0.054   1.09
 2.05 Intr +  48096  48298  203  1  2   87   81    42 0.875   2.40
 2.06 Intr +  48421  48492   72  0  0   76   75    95 0.944   6.60
 2.07 Intr +  51644  51724   81  1  0   99   76     6 0.527   0.33
 2.08 Term +  54196  54417  222  0  0   65   44   145 0.906   4.72
 2.09 PlyA +  54929  54934    6                               1.05

 3.07 PlyA -  55850  55845    6                               1.05
 3.06 Term -  57083  57019   65  0  2   93   47    50 0.619  -0.55
 3.05 Intr -  59679  59572  108  1  0   49   94    68 0.448   3.76
 3.04 Intr -  73564  73403  162  2  0   46  116   198 0.986  18.35
 3.03 Intr -  75037  74854  184  1  1   69   56    74 0.907   1.66
 3.02 Intr -  77644  77018  627  1  0   60   56   485 0.900  34.91
 3.01 Init -  82362  82330   33  0  0  112   84    43 0.006   5.44
 3.00 Prom -  83631  83592   40                              -4.66

 4.00 Prom +  95993  96032   40                              -0.96
 4.01 Sngl +  99626  99829  204  1  0   79   40   320 0.978  21.49
 4.02 PlyA +  99919  99924    6                              -3.74

 5.04 PlyA -  99957  99952    6                              -5.80
 5.03 Term - 100224  99998  227  1  2   26   42   132 0.234  -0.66
 5.02 Intr - 100778 100594  185  1  2   86  105   188 0.710  19.73
 5.01 Init - 101388 101195  194  0  2   92   77   408 0.975  38.54
 5.00 Prom - 132423 132384   40                              -0.56

 6.08 PlyA - 137690 137685    6                               1.05
 6.07 Term - 142239 142129  111  0  0  108   50    59 0.749   2.66
 6.06 Intr - 147636 147460  177  0  0   22   81    95 0.368   2.32
 6.05 Intr - 152015 151931   85  1  1   57   70    28 0.075  -2.28
 6.04 Intr - 153809 153711   99  1  0  119   99    14 0.409   4.83
 6.03 Intr - 155055 154874  182  0  2  113   81    39 0.420   4.37
 6.02 Intr - 162138 162019  120  0  0  128   90     6 0.729   5.49
 6.01 Init - 162728 162678   51  2  0   65   52    30 0.283  -2.58
 6.00 Prom - 164227 164188   40                              -5.26

 7.00 Prom + 170775 170814   40                              -2.36
 7.01 Init + 173248 173369  122  0  2   54   93    40 0.204   0.76
 7.02 Intr + 175305 175391   87  0  0  103   52    43 0.202   1.29
 7.03 Intr + 177907 177941   35  1  2  110   64    67 0.252   4.37
 7.04 Intr + 178136 178567  432  0  0   70   28   247 0.504  10.52
 7.05 Intr + 178923 179005   83  1  2   31   99    48 0.855  -0.44
 7.06 Intr + 181333 181473  141  0  0   81   75   278 0.991  26.35
 7.07 Term + 183393 183530  138  2  0  121   43    78 0.889   4.56
 7.08 PlyA + 183833 183838    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  46758  46806   49  2  1   72   95    28 0.834   3.10
S.002 Init -  79510  79505    6  1  0   68   92     5 0.969  -0.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_1|113_aa
XAKNYNSMNGRSLQKVLCEDPSQPQPNAPTPGPGDRYTHTTLAPVAGAGACQQAHTVAVT
PSCNHEKGPCVFVNSTESEFPEVHPNPIPKIPRISSEEISSFSSELTSPPGTC

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_1|342_bp
naggccaagaattacaacagcatgaatggcagaagcctacagaaggtgctctgtgaggat
ccctcccaaccgcagcccaacgcccccacccctggccctggagaccgctacacacacaca
accttggccccagttgcaggtgctggtgcctgccaacaagcacacacagttgcagtcaca
ccctcgtgtaaccatgaaaaaggcccatgtgtctttgtcaattctactgaatcagaattt
cctgaggtgcacccaaaccccatccccaagatcccaaggatttctagcgaggaaatatca
tccttctcgtctgaactgaccagtcctccagggacctgctga

>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_2|301_aa
MIKGLSSHTDKPTKPCTYKELKFTITKGASAWPPAAGILLRHWRGPKKAHTKPKRQGKEE
CSVKKEYLKPSNLEGPIFQMMWLQMEVHCLTYKTFHEQKINLDGVKPLGSAESGQRVSHP
ALLHTLQLPGDPSQVSPSSTSPSQRWHHIQTEVPVALTPNNREDPASHLIQQGPNHMVAQ
VLRDHPGKAHSSRYKTLTADQTPPPTPTTASEPPGLQPLTPAAYRGPPTECEGDGSLLLS
LWLYEAQIAGAYGIIYCENEADGEPLGSGLEMVSSDRTVGKTGHFPSEGPPAQGKCQGMN
G

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_2|906_bp
atgatcaaaggcttaagctcccacaccgacaaacccactaagccatgcacatacaaggag
ctcaagttcaccatcaccaaaggtgcctctgcatggcctcctgctgctggcattttgctg
agacactggagaggaccgaaaaaggcccacaccaagccaaaaagacaaggcaaagaggaa
tgcagtgtcaagaaagaatatttaaagccaagtaaccttgaaggccctatattccagatg
atgtggctacagatggaggtgcactgcctgacctacaagactttccacgagcaaaaaata
aacctagatggtgtcaagcccctgggatctgcagaaagtggacagcgggtttcacaccca
gccctgctgcacacgctccagcttcctggagacccgagccaggtttctcccagcagcacc
tctccatcccagagatggcaccatattcaaactgaggtaccagtggcactgacccccaac
aacagagaggacccagcttcacacttgatccagcaggggcccaaccacatggtggctcag
gtgctgcgggatcacccagggaaggctcattcctctcgctacaagacgctgactgcggat
cagacacctccacccactcccaccactgcctctgagcccccagggctccagcccctcaca
ccagccgcctacagagggccacctactgaatgtgaaggtgatggaagccttttgctaagt
ctgtggctgtatgaagctcagatcgctggagcatatggcattatctactgtgagaatgag
gctgatggagagccactgggctcaggcttggaaatggtgagctctgatcggaccgtgggg
aaaacaggacatttcccttctgaaggtcccccagcccagggcaaatgccagggcatgaat
ggttga

>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_3|392_aa
MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLK
DAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIA
GDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHTCTAAFATKDRLRTHMVRHE
GKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQ
QQQQQQQQQQHVTSWPGKQVETLRLWEEAVKARKKGMAESVRLLYRISKSQLYESMGPGL
WELWGLRFAYPVGDVPLYATISCCASQPATIM

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_3|1179_bp
atggaggccaactggaccgcgttcctgttccaggcccatgaagcttcccatcaccaacag
caggcagcacagaacagcttgctgcccctcctgagctctgccgtggagccccctgatcag
aaaccattgcttccaataccaataactcagaaacctcagggtgcaccagaaacattaaag
gatgccattgggattaaaaaagaaaaacccaaaacttcatttgtgtgcacttactgcagt
aaagctttcagggacagctatcacctgaggcgccacgaatcctgccacacagggatcaag
ttggtgtcccggccaaagaaaacccccaccacggtggttccccttatctctaccatcgct
ggggacagcagccgaacttcgttggtctcgaccattgcaggcatcttgtcaacagtcact
acatcttcctcgggcaccaaccccagtagcagtgccagcaccacagctatgccagtgacc
cagtctgtcaagaaacccagtaagcctgtcaagaagaaccatgcttgtgagatgtgtggg
aaggccttccgagatgtgtaccatctcaatcgacacaagctctcccattcagatgagaaa
ccctttgagtgtcctatttgtaatcagcgcttcaagaggaaggaccggatgacttaccat
acgtgcactgctgcctttgccaccaaagacagactgcggacacacatggtgcgccatgaa
ggcaaggtatcatgtaacatctgtgggaagctcctgagtgcagcatacatcaccagccac
ttaaagactcatgggcagagccaaagtatcaactgtaatacatgtaaacaaggcatcagt
aaaacatgcatgagtgaagagaccagtaaccaaaagcagcagcagcagcagcagcagcag
cagcagcagcagcaacaacaacaacaacaacatgtgacaagctggccagggaagcaagta
gaaacactgagactgtgggaagaagctgttaaagcaaggaagaaagggatggctgaatct
gtccgtttattgtatcgcatatccaaatcacagctgtacgagtcaatgggaccaggctta
tgggaactgtgggggctgcgttttgcatacccagtgggagatgtgcccctctatgctacc
atctcctgctgtgcttctcaacctgccacgataatgtga

>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_4|67_aa
MGSTKSVTNHLMYESEICYDGENSVVILCFSLGSNCDSCCCFCYGFCYDYGFEIEIFHNL
DFWAHQL

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_4|204_bp
atgggttctacaaaaagtgtcaccaatcatcttatgtacgagagcgagatctgctatgac
ggggagaatagcgtggtgatcctctgcttctccttggggagtaactgcgactcctgctgt
tgcttctgctacggcttctgctacgactacggcttcgagatcgagatcttccataacttg
gacttctgggcccatcaactttaa

>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_5|201_aa
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEVGYTRILFFDQNWIQWS

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_5|606_bp
atgtcgggaggtggtgtgattcgtggccccgcagggaacaacgattgccgcatctacgtg
ggtaacttacctccagacatccgaaccaaggacattgaggacgtgttctacaaatacggc
gctatccgcgacatcgacctcaagaatcgccgcgggggaccgcccttcgccttcgttgag
ttcgaggacccgcgagacgcggaagacgcggtgtatggtcgcgacggctatgattacgat
gggtaccgtctgcgggtggagtttcctcgaagcggccgtggaacaggccgaggcggcggc
gggggtggaggtggcggagctccccgaggtcgctatggccccccatccaggcggtctgaa
aacagagtggttgtctctggactgcctccaagtggaagttggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcatgaggtaggttatacacgtattcttttctttgaccagaattggatacagtgg
tcttaa

>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_6|274_aa
MLFTVPGTLLPLFACLKEGQTALALLPGKHPGVYPTFSARAILRILAGDEHLKSGVECTV
ALFSCQLGSSSLLLLSTPPREKGEESALIAWRTVQQIHVRASLGMSPKLPRLLVRRKRSL
SPRCETDPKTPCNFLLKISTKKHSHSHSSSWSSRTSGKEHLPTWIWQPKPSKPPEHHVQY
ADGNDPVEMENLMLQMREWIIAGVMLFNKQEKKGSSVREEGLASDRHMDDSFIMRGGKQN
EDQMFSGVAPSSSFIRSTNMHHAIMLYCSGQSFC

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_6|825_bp
atgctgttcactgtgcctggaacactcttgcccctcttcgcctgcttaaaggaaggacaa
acagcactggctctcctcccaggaaagcaccctggcgtttaccccacattttcagcaaga
gccatattgaggattcttgctggagatgagcatcttaagagtggggtggagtgcacagtc
gctctgttctcctgccaacttggcagctcatcgctgctgttactatcaacacctccaagg
gaaaagggagaggagtcagctctgatcgcctggcgcactgtgcagcaaattcatgtcaga
gccagccttggaatgtctcccaagctcccaaggctcctggtgaggaggaaaaggagcctt
tctcccagatgtgaaactgatcctaagaccccctgtaatttcctgctgaaaatctccacc
aagaaacacagccacagccacagttcttcctggagttcaagaacctcaggcaaagaacac
ctgcccacatggatctggcagcccaagccctctaagcccccagagcatcatgttcaatat
gctgatgggaatgatccagttgagatggaaaatttgatgctgcagatgagagagtggata
attgctggagtgatgctttttaacaagcaagagaagaagggatccagtgtgcgagaggag
gggctggcctcagacagacacatggacgattcattcatcatgagaggaggaaagcaaaat
gaggaccagatgttctctggtgttgctcccagctcttcattcattcgctccacaaatatg
caccatgctatcatgctctactgctctgggcagtcattctgctag

>gi568815581r:57905750_58107137|GENSCAN_predicted_peptide_7|345_aa
MSYKVTQEISKELRWISAVLVTWDLRGETGTRVCIAMGVSRMQYSIMAKIVGSGNNLELN
PAADKLDNLGAQCGLASVKVSARAAPPFAPATLVALLEARAAELPLPPPPGVSLRCVEAP
DVRGRGRGGGEGSGVTRLLLPPPPPSGASFLQRGRPVTPALFQAGWGRAADRPGPADLAG
GAGGRSGGRRMLPRSPGAALRDRSALEDGIVEGYGPLGEPEEGSRSSFLESKVAFNYCNK
VAPLDFGNEAVEQCHTMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKK
EFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG

>gi568815581r:57905750_58107137|GENSCAN_predicted_CDS_7|1038_bp
atgtcttacaaggtcacccaagaaatcagcaaagaattgaggtggatttcagcagttcta
gtcacatgggacttgagaggggagactggcaccagggtctgcattgcaatgggagtgtca
aggatgcagtatagtataatggctaagattgtaggcagtggaaacaatctggagttgaat
cctgccgctgacaaactggataatcttggggcccagtgcggactcgcctccgtgaaggtg
agcgcccgggctgcgccaccctttgccccggccaccctcgtggcgctgctggaggcccgg
gctgcggagctgccgctgcccccgcccccgggagtctctctgcgctgcgtggaggcccct
gatgtcaggggccggggaagagggggtggagagggctcgggcgtgacgcggctcctcctg
ccgccaccgccaccctctggggcgtccttcctgcagcgaggacgcccagtcactccggcg
ctgttccaggccgggtgggggagggcggccgaccggccggggcctgcggacctggccggc
ggcgcgggcgggaggtcggggggaaggaggatgcttcctcgttccccaggtgctgccctt
cgggaccgcagcgctctggaggatgggatagtggagggatacggcccacttggagagccc
gaagagggaagtagaagctctttcctggagagtaaggtggcttttaattactgtaacaaa
gttgctcctttggactttgggaatgaggcagtggagcagtgtcacaccatgtctgaccgg
aaggcagtgatcaagaacgcagacatgtctgaggacatgcaacaggatgccgttgactgc
gccacgcaggccatggagaagtacaatatagagaaggacattgctgcctatatcaagaag
gaatttgacaagaaatataaccctacctggcattgtatcgtgggccgaaattttggcagc
tacgtcacacacgagacaaagcacttcatctatttttacttgggtcaagttgcaatcctc
ctcttcaagtcaggctag