GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:13:01

Sequence gi568815591f:77437547_77739277 : 301731 bp : 40.39% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5044   5098   55  0  1   90   30    92 0.838   5.10
 1.02 Intr +  10125  10256  132  1  0   57   68    70 0.703   1.60
 1.03 Term +  10440  10543  104  1  2  129   43   119 0.997   8.96
 1.04 PlyA +  10575  10580    6                               1.05

 2.05 PlyA -  12429  12424    6                               1.05
 2.04 Term -  18104  17937  168  2  0   70   54   199 0.158  11.60
 2.03 Intr -  24563  24425  139  1  1   15   94   122 0.093   5.05
 2.02 Intr -  28674  28598   77  0  2   97   67    40 0.088   0.19
 2.01 Init -  34273  34124  150  1  0  103   77    50 0.329   5.49
 2.00 Prom -  36252  36213   40                              -8.75

 3.00 Prom +  38750  38789   40                              -6.55
 3.01 Init +  48462  48613  152  2  2   62   65   104 0.717   5.06
 3.02 Intr +  52197  52375  179  0  2  -36   33   248 0.007   5.54
 3.03 Term +  69299  69486  188  0  2  123   38   128 0.416   7.97
 3.04 PlyA +  69910  69915    6                              -0.45

 4.07 PlyA -  70022  70017    6                               1.05
 4.06 Term -  72637  72543   95  2  2   85   49    80 0.249   0.81
 4.05 Intr -  92116  92038   79  1  1   68  110    64 0.574   4.81
 4.04 Intr -  99844  99544  301  0  1   93  -51   302 0.974  12.61
 4.03 Intr - 100190 100064  127  0  1   97   25   101 0.940   3.52
 4.02 Intr - 100774 100700   75  2  0   42   65   116 0.640   3.27
 4.01 Init - 107839 107761   79  1  1   60   87    42 0.707   2.57
 4.00 Prom - 117738 117699   40                              -5.75

 5.00 Prom + 131811 131850   40                              -3.25
 5.01 Init + 136518 136685  168  2  0   35  110    56 0.255   2.08
 5.02 Intr + 139217 139444  228  1  0   61   62   122 0.450   4.04
 5.03 Intr + 146009 146104   96  1  0   72  103    64 0.770   5.59
 5.04 Intr + 163118 163260  143  1  2   69   87    78 0.366   4.03
 5.05 Intr + 169689 169755   67  0  1   41   78    48 0.225  -2.91
 5.06 Intr + 173402 173500   99  1  0  104   66   158 0.999  14.59
 5.07 Intr + 180934 181019   86  0  2   98   72   122 0.974   9.30
 5.08 Intr + 189159 190129  971  0  2   82   85   759 0.984  64.71
 5.09 Intr + 198185 198303  119  0  2    6  100   100 0.528   2.26
 5.10 Intr + 216313 216451  139  0  1   12   81   122 0.005   3.02
 5.11 Intr + 225384 225645  262  1  1  -86  106   201 0.053   0.12
 5.12 Term + 235026 235122   97  0  1   42   48   143 0.130   2.16
 5.13 PlyA + 236545 236550    6                               1.05

 6.00 Prom + 246413 246452   40                              -4.85
 6.01 Init + 258924 259509  586  2  1   94   90   504 0.900  44.61
 6.02 Intr + 260184 260289  106  1  1  102   56    80 0.877   4.55
 6.03 Intr + 265385 265493  109  2  1   42   80    78 0.581   1.77
 6.04 Intr + 273438 273549  112  2  1   40   28    57 0.001  -6.07
 6.05 Intr + 298864 298980  117  2  0  128  106    84 0.058  13.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  24431  24605  175  2  1   51   48   136 0.803   2.15
S.002 Term + 201673 201747   75  0  0   93   43    98 0.886   2.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:77437547_77739277|GENSCAN_predicted_peptide_1|96_aa
MDEIKEEIDSQTYIGQETVLRKDIIKPGEQPNLPNSSHISGDINHNPLPFTPGHLLRDRN
RMDCNVNVLQEKGPNPDPKRGFLDLAQEIIQGKSIE

>gi568815591f:77437547_77739277|GENSCAN_predicted_CDS_1|291_bp
atggatgaaatcaaagaagaaattgattcacaaacatatatcggacaagagactgtgctc
aggaaagacatcatcaaacctggtgagcagccaaatctccccaactcatcccacatcagt
ggggacataaaccacaaccctcttcccttcacaccagggcatcttcttagggacagaaac
aggatggactgcaatgtgaacgtgttacaggaaaagggtccgaatccagaccccaagaga
gggttcttggatcttgcgcaagaaataattcagggcaagtccatagagtaa

>gi568815591f:77437547_77739277|GENSCAN_predicted_peptide_2|177_aa
MESEQAEVRGKKVFQVDGSVCVKAERWERAQSIRGTKIPHGFPPIKLKRVSILMEEDETG
NVPIWGSTESLWCNFLCSSKHWMAKRSPPVSGLLANKWCLHSVQFKVPAPKRHTERTWAL
LQLLLGTWCSQADESSVDFGSGLVTQSIRDDAESALARATAAIAAASGSQWQQTQLF

>gi568815591f:77437547_77739277|GENSCAN_predicted_CDS_2|534_bp
atggagagtgaacaggcagaggtaaggggaaaaaaagtattccaggtagatgggtcagta
tgtgtgaaggccgaaaggtgggagagagcacagtctattcgaggaactaaaattccacat
ggctttcccccaataaagctgaagagagtgtccatactgatggaagaagatgagacaggg
aatgttcctatttggggctccactgaaagcctctggtgcaatttcctatgctcatctaaa
cactggatggcaaagaggtcaccacccgtgtcaggcttattggcaaacaaatggtgcttg
cacagtgtccagttcaaggtgccagctccgaaaaggcacactgagcgcacatgggcccta
ctgcagctgcttttggggacttggtgcagccaagcagatgaatcctctgttgactttggt
tcggggctggtgactcagagcatcagggatgatgcagaatccgctctggccagggccaca
gcagcaatagcagctgcatctggttcccagtggcagcagacacagctgttctga

>gi568815591f:77437547_77739277|GENSCAN_predicted_peptide_3|172_aa
MWWIVYGKRKDELPDYKDEKHWNQLLREREFVESVSWKKWLSHRKKFFDRSKLEEVDIKE
AFNIDNEPPVVHSLTNGEIAEIVLDQDDHNNSDDEDDVINTKEKVPIEDMGKQSMAVHGN
RLYKRADGSFAPDYSFLPSDRLEYGCDGWSSPAETRGDLGNGSYKSTRPPQL

>gi568815591f:77437547_77739277|GENSCAN_predicted_CDS_3|519_bp
atgtggtggattgtatatggtaaacgcaaagatgaacttcctgattataaggatgagaaa
cactggaaccagctccttagagagagggagtttgtagaatctgtatcctggaagaagtgg
ctctctcacaggaaaaagttctttgatagaagtaagctggaagaagtagatatcaaagaa
gcttttaacattgataatgagcctccagttgttcattcattgaccaatggtgaaatagct
gaaattgttctggatcaagatgatcacaataatagtgacgatgaagatgatgtcattaac
accaaagaaaaggtgcctatagaagacatgggtaagcaaagtatggcagttcatggaaac
cgtctttataagagagctgatgggtcctttgcccccgattattcttttcttccttcagac
agactggaatatggttgtgatggctggagtagcccagctgaaacaagaggtgaccttggg
aatggaagctacaagagtaccaggccacctcagctctag

>gi568815591f:77437547_77739277|GENSCAN_predicted_peptide_4|251_aa
MLPVQPTSPDCTTSMVSISLQMLPLEITRTPRPPQTWASGEEKRDAGKWKLEVHKALAAR
PGEAAMGSGAGKKTRQRGERLTMKSRAKLSSPLWRRLRRHRLGSRHHNFQEQPPLSHSTR
RAAALAPTPTPSLLHPPSPPSSSVGDAAAAAAAAAASGTQLALRSPCPPFPVPPPPHPPP
AAAAAAAAASPHGRNRAVIKSVGSEVREMKVQKPVPFLVQDTATIRFLNLFPTFPAFLFH
KAAIVILARSQ

>gi568815591f:77437547_77739277|GENSCAN_predicted_CDS_4|756_bp
atgcttccagtgcagcccacatctcctgattgtacaaccagtatggtttccattagccta
cagatgctgccacttgaaatcacacggaccccaagaccacctcaaacctgggcctcagga
gaggagaagcgggacgcgggtaaatggaaattagaggtacacaaagcactggcggcccgg
ccgggagaggcggcgatgggctccggcgccggcaagaaaacgcgacagcgaggggagaga
ctcaccatgaagtcccgggcgaagttgtcctccccattgtggcggcggctgcggcggcac
cggctgggctcccgacaccacaacttccaggagcagccgccgctctcccacagtaccagg
cgagccgctgcgctagcgccaaccccaacccccagcttgctccatcctccttccccgccc
tcctcctccgtcggagacgccgccgccgccgccgccgccgccgccgcctcaggaacacag
ctagctctccgctcgccctgcccccccttcccggttcctcctcccccccaccccccgcca
gcagccgcagccgcagccgcagccgcctctccccacgggcgcaatagggcagtaataaag
agcgtgggctctgaagtcagagaaatgaaggttcaaaaacctgttccatttcttgttcag
gacacggcaaccatccgatttctcaatcttttccccacctttcccgcctttctattccac
aaagccgccattgtcatcctggcccgttctcaatga

>gi568815591f:77437547_77739277|GENSCAN_predicted_peptide_5|824_aa
MQQKTNWQKSLPLWSLYVSQGDGRYILTYMVCHVVVISVIESVVRMRDREKAENRRFPAL
CRVLMVAQNHGCCGFLPKVSQELRVPLNKLQKMQAGEGHPVCCGSGMWQKSQLGGRGAIL
EGLADPTIEQGLGVYGPKAYVATQGPLANTVIDFWRMIWEYNVVESRRLYQFHYVNWPDH
DVPSSFDSILDMISLMRKYQEHEDVPICIHCSAGCGRTGAICAIDYTWNLLKAGEQYELV
HRAIAQLFEKQLQLYEIHGAQKIADGVNEINTENMVSSIEPEKQDSPPPKPPRTRSCLVE
GDAKEEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPKPVLHMVSSEQHSADLN
RNYSKSTELPGKNESTIEQIDKKLERNLSFEIKKVPLQEGPKSFDGNTLLNRGHAIKIKS
ASPCIADKISKPQELSSDLNVGDTSQNSCVDCSVTQSNKVSVTPPEESQNSDTPPRPDRL
PLDEKGHVTWSFHGPENAIPIPDLSEGNSSDINYQTRKTVSLTPSPTTQVETPDLVDHDN
TSPLFRTPLSFTNPLHSDDSDSDERNSDGAVTQNKTNISTASATVSAATSTESISTRKVL
PMSIARHNIAGTTHSGAEKEISEIQGVNNNKISFFSDTPVRSEWSELQSQERSEQKKSES
LGVLLACKEAQAKPWTDERPRGEIPNKSQPTSHGRKSYSSALMQNEKKEKGRKEGRKEGT
KEGDREREEGERGRKEGRKETERGKKEREEGRRERKEGEKKEGERKKEGKKEKERKEKEK
EKERKKKEEERRNKHAEILAKTAVDETAKGEPTIMVGVKLDELK

>gi568815591f:77437547_77739277|GENSCAN_predicted_CDS_5|2475_bp
atgcaacaaaaaacaaactggcaaaaatccctgcccttgtggagcttatatgttagtcaa
ggtgatggacgatacatattaacatatatggtctgtcatgtggtggtaattagtgttatt
gagagtgtggttcgaatgagggatagggagaaagcagagaatagaaggttcccggcgctt
tgccgggtgttaatggtggcccaaaatcatgggtgctgtggctttctccctaaggtgtca
caggagctaagggtgccacttaacaaactgcagaagatgcaggcaggtgaaggacaccca
gtctgctgtggcagtggaatgtggcagaaaagccagctgggagggcggggagcaatcctg
gaaggcctggctgaccccacaattgaacagggtttgggcgtctatgggccaaaagcatat
gtagcaactcaaggacctttagcaaatacagtaatagatttttggaggatgatatgggag
tataatgttgtggaatctcgtaggctgtatcagtttcattatgtgaactggccagaccat
gatgttccttcatcatttgattctattctggacatgataagcttaatgaggaaatatcaa
gaacatgaagatgttcctatttgtattcattgcagtgcaggctgtggaagaacaggtgcc
atttgtgccatagattatacgtggaatttactaaaagctggggagcaatatgaacttgtt
catagagctattgcccaactgtttgaaaaacagctacaactatatgaaattcatggagct
cagaaaattgctgatggagtgaatgaaattaacactgaaaacatggtcagctccatagag
cctgaaaaacaagattctcctcctccaaaaccaccaaggacccgcagttgccttgttgaa
ggggatgctaaagaagaaatactgcagccaccggaacctcatccagtgccacccatcttg
acaccttctcccccttcagcttttccaacagtcactactgtgtggcaggacaatgataga
taccatccaaagccagtgttgcatatggtttcatcagaacaacattcagcagacctcaac
agaaactatagtaaatcaacagaacttccagggaaaaatgaatcaacaattgaacagata
gataaaaaattggaacgaaatttaagttttgagattaagaaggtccctctccaagaggga
ccaaaaagttttgatgggaacacacttttgaataggggacatgcaattaaaattaaatct
gcttcaccttgtatagctgataaaatctctaagccacaggaattaagttcagatctaaat
gtcggtgatacttcccagaattcttgtgtggactgcagtgtaacacaatcaaacaaagtt
tcagttactccaccagaagaatcccagaattcagacacacctccaaggccagaccgcttg
cctcttgatgagaaaggacatgtaacgtggtcatttcatggacctgaaaatgccataccc
atacctgatttatctgaaggcaattcctcagatatcaactatcaaactaggaaaactgtg
agtttaacaccaagtcctacaacacaagttgaaacacctgatcttgtggatcatgataac
acttcaccactcttcagaacacccctcagttttactaatccacttcactctgatgactca
gactcagatgaaagaaactctgatggtgctgtgacccagaataaaactaatatttcaaca
gcaagtgccacagtttctgctgccactagtactgaaagcatttctactaggaaagtattg
ccaatgtccattgctagacataatatagcaggaacaacacattcaggtgctgaaaaagaa
atttcagaaattcaaggtgttaataacaataagatttcatttttctcagatacacctgta
agatcggaatggagtgaacttcaaagtcaggaacgatctgaacaaaaaaagtctgaatct
cttggggtcctgctggcatgtaaagaagctcaggctaagccatggacggatgagagacca
cgtggggagattcccaacaagtcccaacccacatcacatggaagaaagtcatacagcagc
gccctcatgcagaatgaaaagaaagaaaaaggaaggaaggaaggaaggaaggaaggaacg
aaggaaggagacagagagagggaagaaggagagagaggaaggaaggagggaaggaaggag
acagagagaggaaagaaggagagagaggaaggaaggagagagaggaaagaaggagagaag
aaggagggagagagaaagaaagaaggaaagaaagaaaaagaaagaaaagaaaaagagaaa
gaaaaagaaagaaagaaaaaagaggaagaaagaagaaacaaacatgcggaaatactggca
aagacagctgtagatgaaacagccaagggagagccaacaattatggttggtgttaagttg
gatgaattgaaataa

>gi568815591f:77437547_77739277|GENSCAN_predicted_peptide_6|344_aa
MAEPPSPVHCVAAAAPTATVSEKEPFGKLQLSSRDPPGSLSAKKVRTEEKKAPRRVNGEG
GSGGNSRQLQPPAAPSPQSYGSPASWSFAPLSAAPSPSSSRSSFSFSAGTAVPSSASASL
SQPVPRKLLVPPTLLHAQPHHLLLPAAAAAASANAKSRRPKEKREKERRRHGLGGAREAG
GASREENGEVKPLPRANDKTRSFDDFSPDQAAAECLSIRKRRILKGSCQTGYLRKALFSD
TVTLGIKASTYGFWGGMIQSIVKGLAETFNFWIHIWELNDLQYISALFACSEEMPDYHLE
KQLADKIKDKIKERDKEKEREKKKHKVMNEIKKENGEVKILLKX

>gi568815591f:77437547_77739277|GENSCAN_predicted_CDS_6|1032_bp
atggcggaaccgccgagccccgtgcactgtgtcgctgccgcggcccccaccgccaccgtc
tcggagaaagaaccgtttggcaagctgcaactctcctcccgggaccctccgggttctctg
tccgccaagaaggtccggactgaggagaagaaggcaccgcggagagtgaacggagaaggg
ggcagcggcgggaacagcaggcagctgcagccgccggcagcaccttcgcctcagagctat
ggcagccccgcgtcttggagctttgcccctctgtctgctgctccctccccgtcctcttct
cggagcagtttctctttctccgctggcacggccgttccctcctcagcctccgcttccttg
tctcagccggtgccgcgcaaactgctggtccctcctacgctgctgcacgctcagcctcac
catctcctcctgcccgccgccgccgccgctgcctcggctaacgccaagtcgcgcagacct
aaggagaagcgggagaaggagaggaggaggcacggtctcggtggggcccgagaggccggc
ggggcctcccgggaggagaacggggaggtgaagccgctgccccgagcaaatgataaaacc
aggagctttgacgatttttcgccagatcaagcggctgcagaatgtttgagcattagaaaa
aggcgaattcttaagggttcttgtcagacaggttacctccgaaaagccttattttcagat
acagtcacattgggcattaaggcttcaacatatggattttggggaggcatgattcagtcc
atagtgaagggcttggcagagaccttcaacttctggatacatatttgggaactgaatgac
ttgcagtatatttcagccctttttgcctgctcagaagagatgcccgattatcatttagaa
aaacaattggctgataaaatcaaagacaaaattaaagagagagacaaagaaaaagaaaga
gaaaaaaagaaacataaagtaatgaatgagatcaagaaagagaatggagaagtaaagatt
ttgctgaaaann