GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:11:34

Sequence gi568815587r:68057691_68290076 : 232386 bp : 45.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 Intr -   8204   8096  109  1  1   94   91   143 0.976  15.49
 1.09 Intr -   8826   8739   88  1  1   87   84    82 0.899   6.73
 1.08 Intr -  11247  11189   59  2  2   73  116   -31 0.835  -3.27
 1.07 Intr -  12603  12499  105  2  0   55  105    45 0.788   2.23
 1.06 Intr -  13167  13034  134  0  2  120  106   119 0.963  16.34
 1.05 Intr -  17140  17027  114  1  0   92  111    75 0.920  10.84
 1.04 Intr -  18893  18738  156  2  0   81   46    58 0.356   1.11
 1.03 Intr -  23767  23714   54  1  0   67  108    18 0.239   0.88
 1.02 Intr -  39440  39329  112  1  1   64  101   101 0.155   9.38
 1.01 Init -  63487  63138  350  1  2   57   67   567 0.447  46.16
 1.00 Prom -  64738  64699   40                              -4.06

 2.13 PlyA -  80216  80211    6                               1.05
 2.12 Term -  84616  84526   91  0  1   87   54   108 0.689   4.49
 2.11 Intr -  90737  90605  133  0  1  102   83    52 0.933   5.80
 2.10 Intr -  95692  95547  146  0  2  100   72    82 0.978   7.73
 2.09 Intr - 101481 100080 1402  1  1   89   23   668 0.005  48.70
 2.08 Intr - 109488 109292  197  2  2  127  108   102 0.945  15.16
 2.07 Intr - 113461 113325  137  1  2   43  116   118 0.908   9.47
 2.06 Intr - 113561 113542   20  0  2   65  121   -11 0.776  -3.77
 2.05 Intr - 114019 113853  167  0  2   39  103   118 0.865   8.00
 2.04 Intr - 116223 116114  110  0  2  107   38    24 0.862  -1.62
 2.03 Intr - 117493 117328  166  0  1   98  103    96 0.981  12.06
 2.02 Intr - 128238 128091  148  1  1  122   59    67 0.943   6.49
 2.01 Init - 132359 132227  133  2  1   79   42    66 0.678   1.40
 2.00 Prom - 147715 147676   40                              -4.26

 3.00 Prom + 149656 149695   40                              -3.86
 3.01 Init + 155654 155947  294  1  0   71  105   190 0.536  14.19
 3.02 Term + 199926 200129  204  2  0   40   52   211 0.775  10.07
 3.03 PlyA + 201529 201534    6                              -0.45

 4.04 PlyA - 203671 203666    6                              -1.75
 4.03 Term - 205228 203955 1274  2  2   73   55   769 0.518  63.86
 4.02 Intr - 214370 214167  204  0  0  104   90   134 0.804  14.37
 4.01 Init - 225501 225495    7  0  1   84   99     0 0.147   1.73
 4.00 Prom - 227057 227018   40                              -2.06


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  72489  72597  109  0  1   79   52   132 0.894   6.68
S.002 Init + 175671 175719   49  2  1   89   58    47 0.801   0.92
S.003 Term + 180100 180230  131  2  2   71   55   111 0.903   4.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:68057691_68290076|GENSCAN_predicted_peptide_1|427_aa
MKTKFCTGGEAEPSPLGLLLSCGSGSAAPAPGVGQQRDAASDLESKQLGGQQPPLALPPP
PPLPLPLPLPQPPPPQPPADEQPEPRTRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGL
SNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQHEGGGGDH
SLQSTRTVLPPGEQGSIMSKQRLGGGFADPCLNAPDTFCDVGLGGAEAMVLESVMFAILA
ERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKW
LFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQ
EGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRK
YPTKKQQ

>gi568815587r:68057691_68290076|GENSCAN_predicted_CDS_1|1281_bp
atgaaaaccaaattctgcaccgggggcgaggcggagccctcgccgctcgggctgctgctg
agctgcggtagcggcagcgcggccccggcgcccggcgtggggcagcagcgcgacgccgcc
agcgacctcgagtccaagcagctgggcggccaacagccgccgctcgcgctgccccctccg
ccgccgctgccgctgccgctgccgctgccccagcccccgccgccgcagccgcccgcagac
gagcagccggagccccggacgcggcgcagggcctatctgtggtgcaaggagttcctgccc
ggcgcctggcggggcctccgcgaggacgagttccacatcagtgtcatcagaggcggcctt
agcaacatgctgttccagtgctccctacctgacaccacagccacccttggtgatgagcct
cggaaagtgctcctgcggctgtatggagcgattttgcagatgaggtcctgtaataaagag
ggatccgaacaagctcagaaagaaaatgaatttcaacatgagggtggtggtggggaccac
agtcttcagagcaccaggaccgtgctgccccctggggagcaggggagcataatgtctaag
cagagacttggaggaggctttgcagacccttgcttaaatgccccggatactttctgtgat
gttgggcttggaggggctgaggccatggttctggagagcgttatgtttgccattctcgca
gagaggtcacttgggccaaaactctatggcatctttccccaaggccgactggagcagttc
atcccgagccggcgattagatactgaagaattaagtttgccagatatttctgcagaaatc
gccgagaaaatggctacatttcatggtatgaaaatgccattcaataaggaaccaaaatgg
ctttttggcacaatggaaaagtatctaaaggaagtgctgagaattaaatttactgaggaa
tccagaattaaaaagctccacaaattgctcagttacaatctgcccttggaactggaaaac
ctgagatcattgcttgaatctactccatctccagttgtattttgtcataatgactgtcaa
gaaggtaatatcttgttgctggaaggccgagagaattctgaaaaacagaaactgatgctc
attgatttcgaatacagcagttacaattacaggggattcgacattggaaatcacttctgt
gagtggatgtatgattatagctatgaaaaatacccttttttcagagcaaacatccggaag
tatcccaccaagaaacaacag

>gi568815587r:68057691_68290076|GENSCAN_predicted_peptide_2|949_aa
MVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGFEGQSRYVPS
SGMSAKELCENDDLATSLVLDPYLGFQTHKMNTRFRPIKGRQEELKEVIERFKKDEHLEK
AFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSSEQNGAKI
VATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMYSTRKNCAQLWLGPAAFIN
HDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGAF
KSRVGLPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDSQSVSSNTDADTTQEKNNAT
SNRKSSVGVKKNSKSRTLTRQSMSRIPASSNSTSSKLTHINNSRVPKKLKKPAKPLLSKI
KLRNHCKRLEQKNASRKLEMGNLVLKEPKVVLYKNLPIKKDKEPEGPAQAAVASGCLTRH
AAREHRQNPVRGAHSQGESSPCTYITRRSVRTRTNLKEASDIKLEPNTLNGYKSSVTEPC
PDSGEQLQPAPVLQEEELAHETAQKGEAKCHKSDTGMSKKKSRQGKLVKQFAKIEESTPV
HDSPGKDDAVPDLMGPHSDQGEHSGTVGVPVSYTDCAPSPVGCSVVTSDSFKTKDSFRTA
KSKKKRRITRYDAQLILENNSGIPKLTLRRRHDSSSKTNDQENDGMNSSKISIKLSKDHD
NDNNLYVAKLNNGFNSGSGSSSTKLKIQLKRDEENRGSYTEGLHENGVCCSDPLSLLESR
MEVDDYSQYEEESTDDSSSSEGDEEEDDYDDDFEDDFIPLPPAKRLRPLSLTHIHGNCCK
AANLEDRRQTQARRDCFGNVLKKPDLLPDPASSLPGKHTRTSVKCGNCQDACVEEAWQED
QGECPLFLLGNQAKQASWRRKWKERLIGHRRRHWACVSPMSPWFISTSP

>gi568815587r:68057691_68290076|GENSCAN_predicted_CDS_2|2850_bp
atggtggtgaatggcaggagaaatggaggcaagttgtctaatgaccatcagcagaatcaa
tcaaaattacagcacacggggaaggacaccctgaaggctggcaaaaatgcagtcgagagg
aggtcgaacagatgtaatggtaactcgggatttgaaggacagagtcgctatgtaccatcc
tctggaatgtccgccaaggaactctgtgaaaatgatgacctagcaaccagtttggttctt
gatccctatttaggttttcaaacacacaaaatgaatactagatttaggcctattaaagga
aggcaggaagaactaaaggaagtaattgaacgttttaagaaagatgaacacttggagaaa
gccttcaaatgtttgacttcaggcgaatgggcacggcactattttctcaacaagaataaa
atgcaggagaaattattcaaagaacatgtatttatttatttgcgaatgtttgcaactgac
agtggatttgaaatattgccatgtaatagatactcatcagaacaaaatggagccaaaata
gttgcaacaaaagagtggaaacgaaatgacaaaatagaattactggtgggttgtattgcc
gaactttcagaaattgaggagaacatgctacttagacatggagaaaacgacttcagtgtc
atgtactccacaaggaaaaactgtgctcaactctggctgggtcctgctgcgtttataaac
catgattgcagacctaattgtaagtttgtgtcaactggtcgagatacagcatgtgtgaag
gctctaagagacattgaacctggagaagaaatttcttgttattatggagatgggttcttt
ggagaaaataatgagttctgcgagtgttacacttgcgaaagacggggcactggtgctttt
aaatccagagtgggactgcctgcgcctgctcctgttatcaatagcaaatatggactcaga
gaaacagataaacgtttaaataggcttaaaaagttaggtgacagcagcaaaaattcagac
agtcaatctgtcagctctaacactgatgcagataccactcaggaaaaaaacaatgcaact
tctaaccgaaaatcttcagttggcgtaaaaaagaatagcaagagcagaacgttaacgagg
caatctatgtcaagaattccagcttcttccaactctacctcatctaagctaactcatata
aataattccagggtaccaaagaaactgaagaagcctgcaaagcctttactttcaaagata
aaattgagaaatcattgcaagcggctggagcaaaagaatgcttcaagaaaactcgaaatg
ggaaacttagtactgaaagagcctaaagtagttctgtataaaaatttgcccattaaaaaa
gataaggagccagagggaccagcccaagccgcagttgccagcgggtgcttgactagacac
gcggcgagagaacacagacagaatcctgtgagaggtgctcattcgcagggggagagctcg
ccctgcacctacataactcggcggtcagtgaggacaagaacaaatctgaaggaggcctct
gacatcaagcttgaaccaaatacgttgaatggctataaaagcagtgtgacggaaccttgc
cccgacagtggtgaacagctgcagccagctcctgtgctgcaggaggaagaactggctcat
gagactgcacaaaaaggggaggcaaagtgtcataagagtgacacaggcatgtccaaaaag
aagtcacgacaaggaaaacttgtgaaacagtttgcaaaaatagaggaatctactccagtg
cacgattctcctggaaaagacgacgcggtaccagatttgatgggtccccattctgaccag
ggtgagcacagtggcactgtgggcgtgcctgtgagctacacagactgtgctccttcaccc
gtcggttgttcagttgtgacatcagatagcttcaaaacaaaagacagctttagaactgca
aaaagtaaaaagaagaggcgaatcacaaggtatgatgcacagttaatcctagaaaataac
tctgggattcccaaattgactcttcgtaggcgtcatgatagcagcagcaaaacaaatgac
caagagaatgatggaatgaactcttccaaaataagcatcaagttaagcaaagaccatgac
aacgataacaatctctatgtagcaaagcttaataatggatttaactcaggatcaggcagt
agttctacaaaattaaaaatccagctaaaacgagatgaggaaaatagggggtcttataca
gaggggcttcatgaaaatggggtgtgctgcagtgatcctctttctctcttggagtctcga
atggaggtggatgactatagtcagtatgaggaagaaagtacagatgattcctcctcttct
gagggcgatgaagaggaggatgactatgatgatgactttgaagacgattttattcctctt
cctccagctaagcgcttgaggccgttaagcttaacacatattcatggaaactgttgtaaa
gctgctaatctggaggacagaagacagacgcaggcccgtagagattgctttggtaatgtt
ctgaaaaagccagatctgttgccagatcccgcgtcctccttgccagggaaacacacacga
acatcagtaaaatgtggtaattgccaggatgcatgtgtggaagaagcgtggcaggaggac
caaggagagtgccccctgtttctgctggggaaccaagcaaagcaggcttcatggaggagg
aaatggaaagagcgcctcatcggccatcgccgcaggcactgggcttgtgtgtccccgatg
tcgccctggtttatctccacgtccccatga

>gi568815587r:68057691_68290076|GENSCAN_predicted_peptide_3|165_aa
MSPRSVRAPRPQPAAAAAVAPPAPPASARCAPGARPRAPPPGASPRLAHGRPYENRPPAS
GLRVPGPCAARCRLRFPGVLTSSPRCPAARTAAASPPPRNWLARGHALSSSRPCPAGALK
ALEEPLLPTAVVCSATPNICRQIRCECSALTALEEPLLPVAIVCS

>gi568815587r:68057691_68290076|GENSCAN_predicted_CDS_3|498_bp
atgagtccccgcagcgtccgagccccccgcccccaaccggccgccgccgccgccgtcgcg
ccccccgcgcccccggcctcggctcgctgcgcccccggcgcccgcccccgcgccccgcca
cccggggcctcacctcgcctcgcgcacggccgcccgtacgaaaaccgtccgccggcttca
ggactccgcgtcccaggtccgtgcgccgcgcggtgccgcctccggttcccgggcgtcctc
acctcatcgccccgctgccctgccgcccgcaccgccgccgcgtcgccgcccccgagaaac
tggctggctcgaggccatgccctgtcgagctcgaggccatgccctgccggggctctcaag
gctttggaggagcctctgctccctacggccgtggtgtgctcagccacgcccaacatttgc
agacagatccggtgtgaatgctcagctctcacggctttggaggagcctctgctccctgtg
gccatcgtgtgctcctga

>gi568815587r:68057691_68290076|GENSCAN_predicted_peptide_4|494_aa
MPGPAAAALRPGQQARPALRDVISGVWAGPGQGALPGAAWVALPATSPRRASGSFLLSEG
HQAAGGLLRPGNFVPNKMWKGLVKRNASVETVDNKTSEDVTMAAASPVTLTKGTSAAHLN
SMEVTTEDTSRTDVSEPATSGGAADGVTSIAPTAVASSTTAASITTAASSMTVASSAPTT
AASSTTVASIAPTTAASSMTAASSTPMTLALPAPTSTSTGRTPSTTATGHPSLSTALAQV
PKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQAQG
PISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVPHTSPIP
EMEAMSPTTQPSPMPYTQRAAGPGTSQAPEQVETEATPGTDSTGPTPRSSGGTKMPATDS
CQPSTQGQYMVVTTEPLTQAVVDKTLLLVVLLLGVTLFITVLVLFALQAYESYKKKDYTQ
VDYLINGMYADSEM

>gi568815587r:68057691_68290076|GENSCAN_predicted_CDS_4|1485_bp
atgccaggccccgccgcagccgctcttcgccccggccagcaggcccgccccgccctccgt
gacgtcatttccggcgtttgggcggggcccgggcagggcgcgctgcccggagctgcctgg
gttgcgctgccggccacgtccccgcgccgggcctcaggctccttcctactgtccgagggc
caccaggccgccgggggcctgctgcgcccgggcaactttgtccctaacaaaatgtggaag
ggattagtcaagaggaatgcatctgtggaaacagttgataataaaacgtctgaggatgta
accatggcagcagcttctcctgtcacattgaccaaagggacttcggcagcccacctcaac
tctatggaagtcacaacagaggacacaagcaggacagatgtgagtgaaccagcaacttca
ggaggtgcagctgatggtgtgacctccattgctcccacggctgtggcctccagtacgact
gcggcctccattacgactgcggcctccagtatgactgtggcctccagtgctcccacgact
gcagcctccagtacaactgtggcctccattgctcccacgactgcagcctccagtatgact
gcggcctccagcactcccatgacacttgcactccccgcgcccacgtccacttccacaggg
cggaccccgtccactaccgccactgggcatccatctctcagcacagccctcgcacaagtg
ccaaagagcagcgcgttgccaagaacagcaaccctggccacattggccacacgtgctcag
actgtagcgaccacagcaaacacaagcagccccatgagcactcgtccaagtccttccaag
cacatgcccagtgacaccgcggcaagccctgtaccccctatgcgtccccaagcacaaggt
cccattagccaggtgtcagtggaccagcctgtggttaacacaacaaataaatccacaccc
atgccctcaaacacaaccccagagcccgcccccacccccacagtggtgaccaccaccaag
gcacaagccagggagccaactgccagcccagtgccagtacctcacaccagcccaatccct
gagatggaggccatgtcccccacgacacagccaagccccatgccatatacccagagggcc
gctgggccaggcacatcccaggcaccggagcaggtagagactgaagccacaccaggtact
gattccactgggccaacacccaggagctcagggggcactaagatgccagccacggactcg
tgccagcccagcacccaaggccagtacatggtggtcaccactgagcccctcacccaggcc
gtggtagacaaaactctccttctggtggtgctgttactcggggtgacccttttcatcaca
gtcttggttttgtttgccctgcaggcctatgagagctacaagaagaaggactacacccag
gtggactacttaatcaacgggatgtatgcggactcagaaatgtga