Result of FASTA (ccds) for pF1KB4445
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4445, 149 aa
  1>>>pF1KB4445 149 - 149 aa - 149 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5815+/-0.00106; mu= 11.2883+/- 0.064
 mean_var=113.1007+/-22.111, 0's: 0 Z-trim(107.2): 133  B-trim: 5 in 1/50
 Lambda= 0.120598
 statistics sampled from 9265 (9430) to 9265 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.29), width:  16
 Scan time:  1.490

The best scores are:                                      opt bits E(32554)
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2            ( 149)  959 177.1 3.5e-45
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19          ( 149)  959 177.1 3.5e-45
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14           ( 149)  959 177.1 3.5e-45
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10          ( 149)  855 159.0 9.9e-40
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20         ( 160)  532 102.8 8.6e-23
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3           ( 161)  512 99.4 9.6e-22
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18         ( 172)  502 97.6 3.4e-21
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX          ( 172)  496 96.6 6.9e-21
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10        ( 146)  494 96.2 7.9e-21
CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1       ( 181)  440 86.9 6.2e-18
CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1       ( 164)  436 86.1 9.3e-18
CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12          ( 151)  435 85.9   1e-17
CCDS10226.2 CALML4 gene_id:91860|Hs108|chr15       ( 196)  434 85.9 1.3e-17
CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12           ( 151)  428 84.7 2.3e-17
CCDS12709.1 CABP5 gene_id:56344|Hs108|chr19        ( 173)  422 83.7 5.2e-17
CCDS9204.1 CABP1 gene_id:9478|Hs108|chr12          ( 167)  418 83.0 8.3e-17
CCDS9205.1 CABP1 gene_id:9478|Hs108|chr12          ( 227)  418 83.2   1e-16
CCDS31913.1 CABP1 gene_id:9478|Hs108|chr12         ( 370)  418 83.4 1.4e-16
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20         ( 172)  411 81.8   2e-16
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18      ( 172)  407 81.1 3.2e-16
CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12        ( 208)  406 81.0 4.1e-16
CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2            ( 150)  402 80.2 5.3e-16
CCDS8170.1 CABP2 gene_id:51475|Hs108|chr11         ( 220)  403 80.5 6.1e-16
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18       ( 171)  401 80.1 6.5e-16
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18       ( 177)  401 80.1 6.7e-16
CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11        ( 170)  398 79.5 9.4e-16
CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11         ( 275)  398 79.8 1.3e-15
CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2            ( 194)  395 79.1 1.5e-15
CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5           ( 167)  385 77.3 4.4e-15
CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3            ( 195)  382 76.8 7.1e-15
CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17          ( 197)  360 73.0   1e-13
CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5          ( 191)  342 69.9 8.7e-13
CCDS66808.1 CALML4 gene_id:91860|Hs108|chr15       ( 120)  338 68.9   1e-12
CCDS31082.1 EFCAB2 gene_id:84288|Hs108|chr1        ( 162)  322 66.3 8.7e-12
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12          ( 166)  318 65.6 1.4e-11
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4           ( 173)  314 64.9 2.4e-11
CCDS42052.1 CALML4 gene_id:91860|Hs108|chr15       ( 149)  306 63.5 5.6e-11
CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2         ( 170)  302 62.8   1e-10


>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2                 (149 aa)
 initn: 959 init1: 959 opt: 959  Z-score: 924.5  bits: 177.1 E(32554): 3.5e-45
Smith-Waterman score: 959; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)

               10        20        30        40        50        60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS18 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
               70        80        90       100       110       120

              130       140         
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
       :::::::::::::::::::::::::::::
CCDS18 EVDEMIREADIDGDGQVNYEEFVQMMTAK
              130       140         

>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19               (149 aa)
 initn: 959 init1: 959 opt: 959  Z-score: 924.5  bits: 177.1 E(32554): 3.5e-45
Smith-Waterman score: 959; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)

               10        20        30        40        50        60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
               70        80        90       100       110       120

              130       140         
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
       :::::::::::::::::::::::::::::
CCDS33 EVDEMIREADIDGDGQVNYEEFVQMMTAK
              130       140         

>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14                (149 aa)
 initn: 959 init1: 959 opt: 959  Z-score: 924.5  bits: 177.1 E(32554): 3.5e-45
Smith-Waterman score: 959; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)

               10        20        30        40        50        60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS98 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
               70        80        90       100       110       120

              130       140         
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
       :::::::::::::::::::::::::::::
CCDS98 EVDEMIREADIDGDGQVNYEEFVQMMTAK
              130       140         

>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10               (149 aa)
 initn: 1059 init1: 855 opt: 855  Z-score: 826.7  bits: 159.0 E(32554): 9.9e-40
Smith-Waterman score: 855; 84.6% identity (96.0% similar) in 149 aa overlap (1-149:1-149)

               10        20        30        40        50        60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
       :::::::::..::::::::::::::: :::.::::::::::::::::::.::..:.: ::
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
       :::.:::::: ::::::::::.:::::::::::::::::..:::::::::: :::::.::
CCDS70 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
               70        80        90       100       110       120

              130       140         
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
       ::::::: :: ::::::::::::.....:
CCDS70 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
              130       140         

>>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20              (160 aa)
 initn: 529 init1: 324 opt: 532  Z-score: 522.7  bits: 102.8 E(32554): 8.6e-23
Smith-Waterman score: 532; 53.1% identity (83.4% similar) in 145 aa overlap (5-146:12-156)

                      10        20        30        40        50   
pF1KB4        MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI
                  :.::.::::: ::..:: :: : :..:::::::: :::.::. ::. .:
CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII
               10        20        30        40        50        60

            60        70        80           90       100       110
pF1KB4 NEVDADGNGTIDFPEFLTMMARKMKDT---DSEEEIREAFRVFDKDGNGYISAAELRHVM
       .::: ::.::::: :::.::.:.::.     ::::. : ::.::....:::.  :: ...
CCDS13 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIF
               70        80        90       100       110       120

              120       130       140          
pF1KB4 TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 
          ::..::::.. .....: ..::.....::..::    
CCDS13 RASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ
              130       140       150       160

>>CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3                (161 aa)
 initn: 521 init1: 267 opt: 512  Z-score: 503.8  bits: 99.4 E(32554): 9.6e-22
Smith-Waterman score: 512; 52.0% identity (80.4% similar) in 148 aa overlap (3-146:10-157)

                      10        20         30        40        50  
pF1KB4        MADQLTEEQIAEFKEAFSLFDKDG-DGTITTKELGTVMRSLGQNPTEAELQDM
                .::::::  ::: ::..:   . :: :.::::: ::: ::::::  :::.:
CCDS28 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
               10        20        30        40        50        60

             60        70        80           90       100         
pF1KB4 INEVDADGNGTIDFPEFLTMMARKMKDTD---SEEEIREAFRVFDKDGNGYISAAELRHV
       :.::: ::.::.:: :::.::.: ::: .   ::::. . ::.:::...:::.  ::. .
CCDS28 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM
               70        80        90       100       110       120

     110       120       130       140          
pF1KB4 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 
       .   :: .:.....:.....: ..::...:.::...:    
CCDS28 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
              130       140       150       160 

>>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18              (172 aa)
 initn: 601 init1: 500 opt: 502  Z-score: 494.1  bits: 97.6 E(32554): 3.4e-21
Smith-Waterman score: 502; 54.5% identity (83.2% similar) in 143 aa overlap (4-146:24-166)

                                   10        20        30        40
pF1KB4                     MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
                              .:::.:  : .:::.::: ::.::: .::: ..::.:
CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL
               10        20        30        40        50        60

               50        60        70        80        90       100
pF1KB4 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
       : .: . :.. ::.::: .:.: :.: .::..:..::.. :..::: .:::.:: : .: 
CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK
               70        80        90       100       110       120

              110       120       130       140            
pF1KB4 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK   
       ::  .:..: ..:::.:::::..::: ::: ::::.:: :::...:      
CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY
              130       140       150       160       170  

>>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX               (172 aa)
 initn: 599 init1: 494 opt: 496  Z-score: 488.4  bits: 96.6 E(32554): 6.9e-21
Smith-Waterman score: 496; 52.4% identity (82.5% similar) in 143 aa overlap (4-146:24-166)

                                   10        20        30        40
pF1KB4                     MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL
                              .:::::  :..:::.::: :: ::: .::: ..::.:
CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
               10        20        30        40        50        60

               50        60        70        80        90       100
pF1KB4 GQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY
       : .: . :.. ::.:.: .:.: ..: .:::.:..::.. :..::: .::..:: : .: 
CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
               70        80        90       100       110       120

              110       120       130       140            
pF1KB4 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK   
       ::  .:..:  .:::.:::::..::: ::: ::::.:. .::...:      
CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
              130       140       150       160       170  

>>CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10             (146 aa)
 initn: 524 init1: 253 opt: 494  Z-score: 487.4  bits: 96.2 E(32554): 7.9e-21
Smith-Waterman score: 494; 51.4% identity (83.6% similar) in 146 aa overlap (1-146:1-143)

               10        20        30        40        50        60
pF1KB4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
       :: .:: :. :..:.:::  : ::.:::...:::..... :.: .::.:. .:.:::.::
CCDS70 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
       .: :.: ::::  :.: .   . :... :::.::.::.:.:.. :::..:..::. : .:
CCDS70 DGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
               70           80        90       100       110       

              130       140         
pF1KB4 EVDEMIREADIDGDGQVNYEEFVQMMTAK
       :.: ::::::.: ::.::::::..:.   
CCDS70 ELDAMIREADVDQDGRVNYEEFARMLAQE
       120       130       140      

>>CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1            (181 aa)
 initn: 415 init1: 228 opt: 440  Z-score: 435.5  bits: 86.9 E(32554): 6.2e-18
Smith-Waterman score: 440; 45.3% identity (75.3% similar) in 150 aa overlap (1-149:26-175)

                                        10        20        30     
pF1KB4                          MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT
                                :...:. ::: :.: .: .::..:.: . : ::  
CCDS30 MGLQQEISLQPWCHHPAESCQTTTDMTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEW
               10        20        30        40        50        60

          40        50        60        70         80        90    
pF1KB4 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA-RKMKDTDSEEEIREAFRVFD
       .:  :: :::..:: .: ..:: :..: ..   ::..:.  . :  ..: :.: ::::::
CCDS30 LMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALMGVYHEKAQNQESELRAAFRVFD
               70        80        90       100       110       120

          100       110       120       130       140              
pF1KB4 KDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK     
       :.:.:::.   :..:. : :: :.. :...:..::: :::  ..::::: :::..     
CCDS30 KEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESFKLI
              130       140       150       160       170       180

CCDS30 Q
        




149 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 15:02:38 2016 done: Thu Nov  3 15:02:38 2016
 Total Scan time:  1.490 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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