GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:55:47

Sequence gi568815589f:122934567_123135613 : 201047 bp : 39.50% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    109    104    6                               1.05
 1.03 Term -   6369   6136  234  0  0   99   52   187 0.645  11.54
 1.02 Intr -   7347   7136  212  1  2   45   69   140 0.300   5.51
 1.01 Init -  16782  16728   55  0  1   68  100     4 0.177   1.10
 1.00 Prom -  19563  19524   40                              -3.85

 2.00 Prom +  21253  21292   40                              -8.05
 2.01 Init +  22494  22643  150  2  0   44   93   143 0.981  10.49
 2.02 Intr +  49919  50153  235  1  1   66   50   262 0.900  16.54
 2.03 Intr +  51649  51853  205  2  1   94   78   166 0.998  13.54
 2.04 Intr +  54731  54905  175  2  1  106   87   168 0.999  17.52
 2.05 Intr +  55490  55647  158  1  2   85   63   131 0.628   8.19
 2.06 Intr +  61475  61585  111  2  0   46  121   114 0.631   9.08
 2.07 Intr +  61973  62039   67  2  1   83   91    68 0.971   4.59
 2.08 Intr +  62693  62795  103  1  1  101   54    67 0.999   3.43
 2.09 Intr +  64031  64200  170  0  2  103   84   113 0.988  11.14
 2.10 Intr +  75788  75962  175  1  1   67   92   125 0.984   9.39
 2.11 Intr +  80977  81070   94  2  1   87  115    74 0.999   8.10
 2.12 Intr +  85743  85893  151  0  1   74  116   189 0.999  19.54
 2.13 Intr +  99078  99176   99  2  0  100   92    59 0.777   6.89
 2.14 Term + 100310 101050  741  1  0    4   45   443 0.088  24.07
 2.15 PlyA + 101341 101346    6                               1.05

 3.00 Prom + 112853 112892   40                              -6.65
 3.01 Init + 120270 120297   28  2  1   69   88    43 0.302   2.21
 3.02 Intr + 121962 122002   41  1  2   97   82    24 0.289  -0.28
 3.03 Intr + 130782 130895  114  2  0  130   63    89 0.996  10.32
 3.04 Intr + 135784 135858   75  0  0   99   84    66 0.985   6.09
 3.05 Intr + 138986 139111  126  1  0   89   98   105 0.999  11.56
 3.06 Intr + 142068 142196  129  2  0   61   93   113 0.989   9.07
 3.07 Intr + 146474 146538   65  1  2  108   -7    93 0.111  -1.60
 3.08 Intr + 146681 146802  122  2  2   34  100    82 0.080   3.22
 3.09 Intr + 152036 152112   77  0  2   36   89    61 0.705  -0.68
 3.10 Intr + 155192 155284   93  1  0  101   68   149 0.990  13.44
 3.11 Intr + 155709 155819  111  2  0   91  111   195 0.997  21.76
 3.12 Intr + 157318 157419  102  0  0   96   85     5 0.543   0.45
 3.13 Intr + 163175 163279  105  1  0   50  110   219 0.997  19.79
 3.14 Intr + 164149 164232   84  0  0   70   96    96 0.995   7.70
 3.15 Intr + 164912 164983   72  1  0   49   94   102 0.893   5.58
 3.16 Intr + 167000 167197  198  1  0   61   92   289 0.998  25.23
 3.17 Term + 168525 168647  123  2  0  106   54   130 0.997   8.80
 3.18 PlyA + 169852 169857    6                              -0.45

 4.00 Prom + 171704 171743   40                              -2.05
 4.01 Init + 172958 173112  155  1  2   90   -8   100 0.733   0.11
 4.02 Intr + 173803 173889   87  1  0  109    7   132 0.904   5.37
 4.03 Intr + 174256 174564  309  1  0   -9   64   267 0.182   9.10
 4.04 Intr + 177832 178135  304  1  1   51   20   290 0.714  14.17
 4.05 Intr + 178976 179165  190  1  1   65  110    45 0.609   2.64
 4.06 Intr + 179770 180121  352  2  1   85   21   167 0.572   3.16
 4.07 Intr + 180603 180730  128  0  2   98   63    60 0.463   3.90
 4.08 Intr + 185014 185149  136  2  1   16   95   138 0.072   6.01
 4.09 Intr + 186407 186664  258  2  0   33   87   119 0.527   1.96
 4.10 Intr + 188507 188746  240  2  0   21   87   132 0.526   2.14
 4.11 Intr + 193154 193223   70  2  1  106   55    36 0.304   0.37
 4.12 Term + 193692 193814  123  2  0   49   42   152 0.445   4.10
 4.13 PlyA + 196678 196683    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  23686  23742   57  0  0   83   54    77 0.915   0.51
S.002 Intr + 184991 185149  159  2  0   82   95   137 0.851  11.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:122934567_123135613|GENSCAN_predicted_peptide_1|166_aa
MQWHGFANVQLAEAKPPPRHLFPKKNSRVTKGMQMRETQEQMINSLDAEEQRPKYYQAMD
SELLEVLRLSFGSTRKTLRVRIIKRHSDEVCDHDERPYWPNTGKRGGASSSPSPTWAFSP
PQDCAPARSALAVSWTWAVLCIWSWTANYVTAAGTGDDGSGLGSTC

>gi568815589f:122934567_123135613|GENSCAN_predicted_CDS_1|501_bp
atgcagtggcatggatttgctaatgtgcaattagcagaggcaaaaccacctcccagacat
ttgtttccaaaaaagaattctcgagtaaccaaaggtatgcagatgcgtgaaacgcaggag
cagatgataaacagtctggatgcagaagagcagagaccaaagtactaccaggcaatggac
agcgaactcctggaagtcttgaggttatcctttggctcaacacgtaaaaccctaagggtg
cggataatcaaaagacacagcgatgaggtctgcgaccatgacgagcgaccctattggccc
aataccgggaagcgaggcggagcttcctcttctccgagccccacctgggctttcagcccg
cctcaggactgtgcgcctgcgcgaagtgcactggctgtgagctggacctgggctgtcttg
tgtatttggagttggacagccaactacgtgactgcagccgggactggggacgatggaagc
ggactgggtagtacctgttga

>gi568815589f:122934567_123135613|GENSCAN_predicted_peptide_2|877_aa
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QKELADVLMDPPMDDQPGEKELVKRSQLDGEGDGPLSNQLSASSTINPVPLVGLQKPEMS
LPVKPGQGDSEASSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQI
SLDVTLSVPNVSEGIVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATAAPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSPGKDVRNS
DMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVLFMTTAVDLVITEVQE
PVRFLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQRERKNNTDTLYEVVCLESE
SERERRKTTASPSVRLPQSGSQSSVIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGELLSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKFC
STRVEAHSCFARLSAKDVLWLLFGLQHAELQIFGFVVSVLKSVSMASLACISIDRYIAIT
KPLTYNTLVTPWRLRLCIFLIWLYSTLVFLPSFFHWGKPGYHGDVFQWCAESWHTDSYFT
LFIVMMLYAPAALIVCFTYFNIFRICQQHTKDISERQARFSSQSGETGEVQACPDKRYAM
VLFRITSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCNCVIYSLSNSVFQ
RGLKRLSGAMCTSCASQTTANDPYTVRSKGPLNGCHI

>gi568815589f:122934567_123135613|GENSCAN_predicted_CDS_2|2634_bp
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcagtatctactctt
aatagtgaagattttgtcttggtttccaggcaaggagatgagacaccatctacaaataat
ggaagtgatgatgagaaaacaggactcaagattgtagggaatggaagtgaacagcagctg
caaaaagagctagcagatgtactgatggatcctccaatggacgaccagccaggggaaaag
gagcttgtgaaaaggtcacaactggatggtgaaggagatgggcctctttctaatcagctc
tccgcttcatccaccattaaccctgtgccattagtagggctccaaaaaccagagatgagc
ctaccagtgaaacctggacaaggagattctgaagcttcaagtcctttcacaccagtggcc
gatgaggacagcgtagttttcagtaaactgacttacttaggctgtgcctcggtaaatgct
cccaggagtgaagtggaagccttaaggatgatgtccatcttaagaagccagtgtcagatt
tcactagatgttaccctttcagtgccgaatgtgtctgaaggaattgtgagactcttagat
cctcagacaaacactgaaatagcaaactaccctatctacaaaatcctcttctgtgtcaga
gggcatgatggaactcctgagagtgactgttttgctttcactgaaagtcattacaatgca
gagctcttcagaatacacgtcttccggtgtgaaatacaagaagctgtaagccggatactt
tacagttttgccactgccttccgccgttctgccaagcagaccccactttcagccactgct
gcaccccagactcctgacagtgacatctttaccttctctgtgtctttagaaataaaagaa
gatgatggtaaaggttattttagtgcagttcccaaagataaggacagacagtgctttaaa
ctacgccaaggaattgataagaagattgtcatctatgtgcagcaaacaactaataaagaa
cttgccattgaaaggtgttttggtcttctccttagtccaggaaaagatgtacgaaatagt
gacatgcacttattagatttggaatctatgggcaaaagttcagatggaaagtcgtatgtt
attacggggagctggaatccaaaatccccacattttcaagttgtaaatgaagaaactcct
aaagataaagtcctgtttatgaccacagctgtagatttggtaataacagaagtacaggag
cctgttcgatttctcctggagacaaaagtccgcgtttgctcacctaatgaaagattattc
tggcccttcagcaaacgtagtactactgaaaatttctttttgaaactaaaacagataaag
caaagggagagaaagaataatactgacactttatatgaagttgtatgcttggaaagtgaa
tcagaaagagagaggaggaaaactacagccagtccttcagttcgcctgccacagtctgga
tcgcaaagttcagtgataccttctcctccagaagatgatgaagaggaagataatgatgaa
cctctcctgagtggatctggtgatgtatccaaagaatgtgcagaaaaaattcttgaaaca
tggggagaactgttgtcaaaatggcatctcaacttgaatgtgagaccgaagcagttgtca
tccttagtaagaaacggtgtccctgaagctcttcgaggagaagtctggcagctgctagca
ggctgtcataacaatgaccacctggtagagaaataccgcattcttatcacaaagttctgc
agtacgcgggttgaagcacattcctgctttgcaaggctttctgctaaggatgtattgtgg
cttttgtttggattgcagcatgcagaattacagatatttggttttgtagtatcagttctg
aagagcgtctccatggcttctctggcctgtatcagcattgatagatacattgccattact
aaacctttaacctataatactctggttacaccctggagactacgcctgtgtattttcctg
atttggctatactcgaccctggtcttcctgccttcctttttccactggggcaaacctgga
tatcatggagatgtgtttcagtggtgtgcggagtcctggcacaccgactcctacttcacc
ctgttcatcgtgatgatgttatatgccccagcagcccttattgtctgcttcacctatttc
aacatcttccgcatctgccaacagcacacaaaggatatcagcgaaaggcaagcccgcttc
agcagccagagtggggagactggggaagtgcaggcctgtcctgataagcgctatgccatg
gtcctgtttcgaatcactagtgtattttacatcctctggttgccatatatcatctacttc
ttgttggaaagctccactggccacagcaaccgcttcgcatccttcttgaccacctggctt
gctattagtaacagtttctgcaactgtgtaatttatagtctctccaacagtgtattccaa
agaggactaaagcgcctctcaggggctatgtgtacttcttgtgcaagtcagactacagcc
aacgacccttacacagttagaagcaaaggccctcttaatggatgtcatatctga

>gi568815589f:122934567_123135613|GENSCAN_predicted_peptide_3|554_aa
MNFEEEEHREWDLAGSWDNSGGKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKIC
KAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKF
YQLERLMQTSKDDLLLTDFEGALKFFRVQLPKRYRSEENAKKLMELACNMKPTHHEDNQD
EDLYDDPLPLSEYKPLVSKFWGSQKLHVDFQVRRASVPLTRVVQGLTVLPDNQATHAAKV
SISREPMRSYGVFIDFVFVISQKKLKKYEKEYHTMREQQAQQEDPIERFERENRRLQEAN
MRLEQENDDLAHELVTSKIALRKDLDNKHYMGHSLPVRVFLPSEWREAGVHGAGTTEAGP
EAEEKADALNKELLMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIG
DYKQICSQLSERLEKQQTANKVEIEKIRQKVDDCERCREFFNKEGRVKGISSTKEVLDED
TDEEKETLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLS
SIKTATGVQGKETC

>gi568815589f:122934567_123135613|GENSCAN_predicted_CDS_3|1665_bp
atgaattttgaggaggaagaacacagagagtgggatttggcagggtcatgggacaatagt
ggagggaaggagtctccccaggacagtgctatcacccgggatattaaccgaacattccca
gcccatgactactttaaggacacaggaggagatggacaagattccttatataaaatatgc
aaggcttattctgtgtatgatgaagagattggttattgccagggccagtcatttcttgct
gctgtgctccttctccatatgcctgaagaacaggcattcagtgttctggtcaagatcatg
tttgactatgggctcagggaacttttcaagcaaaacttcgaagatttgcattgcaaattt
taccagttggagcgcctcatgcagacttcgaaagatgacctgctgttgacagactttgaa
ggtgccttgaagttctttagggttcagcttcctaagagataccgctcagaagaaaatgca
aaaaaactaatggaattagcctgcaacatgaagcctacccatcatgaggacaaccaggat
gaagacctttatgatgatccacttccacttagtgaatataagccattagtaagtaaattc
tgggggagtcagaagttacacgtggattttcaggtgcgcagggcgtcagtgcccctaact
cgtgttgttcaagggttaactgtacttcctgataatcaagccacccatgctgcaaaagtc
agcatcagccgtgaacccatgagaagctatggtgtttttattgattttgtgtttgtgatt
agtcagaagaagttgaaaaaatacgagaaagaatatcacaccatgagggaacagcaggcc
cagcaagaagaccccatcgagcgatttgagcgggagaataggcgtctacaagaagctaac
atgaggttggaacaggaaaacgatgacttagcccatgagctggtgaccagcaagattgca
ctacggaaggacctggataacaaacactatatgggtcattctctccctgttcgggtattt
ctgcctagtgagtggagggaggcaggtgtacatggagcagggactactgaagcagggcca
gaggctgaggaaaaggcagatgctctgaataaggagctgctgatgaccaaacagaagttg
attgatgcagaagaagagaaaagacggctggaagaagagtctgctcagttaaaagaaatg
tgccgtcgggaactcgacaaggcagaatctgagattaaaaaaaacagttctatcattggt
gactataagcagatttgttctcagttgagtgaaagattggagaagcagcagacagccaat
aaggtggaaattgagaaaattcggcaaaaagtggatgactgtgagcggtgccgggaattt
ttcaacaaagaagggcgtgtaaaaggcataagctcaaccaaggaggttttagatgaggac
acggatgaagagaaagagacgctcaagaaccagctgagagaaatggagctagaactggca
cagaccaaactccagctggtggaggccgagtgtaagatacaggacttggaacaccattta
gggcttgccctcaatgaggtgcaggcagccaagaagacgtggtttaaccgaacactgagc
tccataaagacagcaaccggggttcaagggaaagagacttgctga

>gi568815589f:122934567_123135613|GENSCAN_predicted_peptide_4|783_aa
MQHRLSGPSLAGPAANQADFQGLDNSQWGGSGSDRMAGAISPKVSAPLLNSNHQNTPEFS
DVIPKFESEGEKSACDHTIGEQQQQQQPLARFPTRTLPWATGPSSSSSFQVDWDYIVVLS
SQLLGQLNCRSLAEKQAAGRRALALGSNCCRPLEARHHWAGSFNPEPRFPICIVCLGITD
PANSPSRPFAADTVLLSTHGSASYSHLLFTSDWQQLTSLAPLRCSERQLPSTCLETPLRG
KTMLSRKRYKHPNYTEHSSMQPPRLIHLSPLRLTSGPAQSSPPPGPPALLFQCPTCHSKP
KFHMGRNYIVLCIEPVLTRRRCSGSLCGEVDGSRQWMGRKFPVMIKPKELGKECPRLPMG
YRLCSTDAESNKLQPLLRLKMNTNGLTFCQAKGLSMNNHPVPVTPGWRAQPGGNSERVKM
LIGHKPLPTANGDARVLQHNGVWPTKAPFPSPVEMALAPFYLLCTLKALHTPQVGTLSLC
MHARPASDSPPGDPVWLSGKPIALGKLLTWQQLTPISTKEPTQLHPEQAMHLPLQHLLAE
PCPPHVHPHLGQPWIFVIGPIPTTRRLSELKCFHWSQPLFTCTQKRTWYLIGTGLFQQDW
IALSTSQLYLIQPFIDAKATLNVHTDSAWKKTRVVPATLKPRHRNCHFKPDNLMVLEVRE
EILRAQVNNKWCDAQRLAIGAVNEKTTYSGEKSREAKLHVNLRQFGEAKSFIYISLLFQL
ANDTHLLQPQSKVMEKNEGYKFEPSAKKKKADQSKTQGNHHWPNSQAPPAQHPGPGGLLP
DVG

>gi568815589f:122934567_123135613|GENSCAN_predicted_CDS_4|2352_bp
atgcagcacaggctgagtggaccttctttggcaggccctgctgcaaaccaagctgatttc
cagggccttgataattctcagtggggaggcagcggctcagaccgaatggcaggagctatc
agccccaaagtgtctgcacctcttctgaattccaatcatcagaacacccctgagttcagt
gatgttattcccaaatttgaaagtgaaggtgaaaagtctgcctgtgaccacaccatcggg
gagcagcagcagcagcagcagcccctggcccgattccccaccaggacacttccctgggct
accggaccttcttcatcctcgtccttccaagtggactgggactacattgtggtcttgagc
tctcagttactagggcagctcaactgcagaagccttgcagaaaagcaggcagcaggaaga
agagccttagctttgggttccaattgctgccgccctctagaagctcgacaccattgggca
gggtcctttaaccctgagcctcggtttccgatctgtattgtctgtctgggtattactgac
cccgcgaacagccctagccgccccttcgcagcggacactgtgctcctatcaacgcacggc
agcgccagctattcccaccttctgttcacgtcagactggcagcagctcacgtccctggca
cctctccgatgctctgaacggcagctcccttcaacgtgcctagaaacccctctgagagga
aagaccatgctcagcagaaagcgctacaaacaccccaactacactgagcattcctcaatg
cagccaccacgtctgattcacctcagtcccctacgcctgacgtcgggcccggcccagagc
agtccacccccagggccacctgctctcctcttccaatgtcccacgtgtcactcaaaacct
aagttccatatgggcaggaactacatcgtcctgtgcattgagccagtgctcacacggagg
agatgctcaggaagcctttgtggggaggtggatggatccaggcagtggatgggaaggaag
tttccagtcatgattaagccaaaggaacttgggaaagaatgtccacgtcttcccatgggc
tacagactgtgttccacagatgctgaatccaacaagctccaacccttgcttaggttaaaa
atgaacacaaatggattaactttttgccaagcaaaaggcctcagcatgaacaaccacccg
gtacctgtgactcctggctggagagcccagcccggcggaaactcagaaagggtgaagatg
ctgataggtcacaagcccctccccactgccaatggagatgccagagtgctccagcacaat
ggagtgtggcccaccaaagccccatttcctagcccggtggagatggccctcgctccattc
tacctcctctgtaccctcaaggcccttcacactccccaagtgggcacactctctctgtgc
atgcatgccaggcccgcctctgactcccctcctggggatcccgtctggctcagtgggaag
cctatcgctcttggtaaattactcacctggcagcagctgacgcctatcagcaccaaggaa
ccgacacagctccaccctgagcaggccatgcacctgcctctccaacacctgttggcagag
ccttgccctcctcacgttcatcctcacctcggccaaccatggatatttgtaataggccca
attccaacaacaaggagactgtcagaattaaaatgcttccactggtcacagcctctgttc
acttgtacccagaagaggacctggtacctaataggcactgggctgtttcagcaggactgg
atcgcactcagtactagtcagctatacctcatacaaccttttatagatgccaaagccaca
ttaaatgtacatacagattctgcatggaaaaaaacaagagttgttccagcaactttaaaa
ccaagacatagaaattgccatttcaagccagacaacctgatggttctagaagtcagagaa
gaaatcttgagggcccaagtgaataataaatggtgcgacgctcagaggctggcaataggg
gctgtcaatgaaaaaaccacctacagtggagaaaagagcagagaagcaaaacttcatgtt
aatctcaggcaatttggtgaagccaagagcttcatttatatttctctgctctttcagctg
gccaatgatacccatttacttcaaccccaaagcaaagttatggaaaagaatgaaggctac
aaatttgaacctagtgcaaagaagaagaaggcagatcagtccaagacccagggcaatcat
cactggcccaattcacaagcaccacctgctcagcaccctgggcccggaggacttcttcca
gatgttggatga