GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:44:21

Sequence gi568815581f:69405778_69641750 : 235973 bp : 40.51% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6130   6192   63  0  0  105   82    19 0.713   4.20
 1.02 Intr +   6457   6559  103  0  1   36   69    58 0.607  -2.47
 1.03 Term +   7679   7776   98  0  2  123   42    79 0.412   3.95
 1.04 PlyA +   7850   7855    6                               1.05

 2.10 PlyA -   7951   7946    6                              -1.75
 2.09 Term -   9144   8800  345  0  0   65   53   192 0.167   6.91
 2.08 Intr -  16996  16871  126  1  0   47  110    23 0.064   0.36
 2.07 Intr -  18461  18356  106  1  1  100    8    94 0.075   1.90
 2.06 Intr -  36151  35990  162  0  0   53   92    76 0.080   2.67
 2.05 Intr -  36669  36450  220  1  1   26   93   156 0.235   6.34
 2.04 Intr -  46648  46591   58  1  1   87  102     8 0.106  -0.36
 2.03 Intr -  51741  51575  167  1  2   41   99   145 0.960   9.66
 2.02 Intr -  55675  55547  129  2  0   54  109   150 0.728  13.45
 2.01 Init -  65004  64947   58  0  1   55   99    25 0.126   1.82
 2.00 Prom -  65545  65506   40                              -6.95

 3.03 PlyA -  66611  66606    6                               1.05
 3.02 Term -  71773  71566  208  0  1   85   47   197 0.309  11.13
 3.01 Init -  79526  79471   56  2  2   59   84    34 0.433   0.91
 3.00 Prom -  86504  86465   40                              -2.05

 4.00 Prom +  87612  87651   40                              -5.85
 4.01 Init +  91400  91511  112  1  1   88   63    74 0.493   5.32
 4.02 Intr + 100003 100069   67  2  1  133  113    47 0.970   8.74
 4.03 Intr + 111078 111126   49  0  1   97  110    24 0.995   3.26
 4.04 Intr + 111723 111836  114  2  0  121   75   123 0.930  14.02
 4.05 Intr + 113536 113655  120  0  0   45   92   149 0.875  10.77
 4.06 Intr + 114493 114609  117  0  0   51   65    92 0.884   2.94
 4.07 Intr + 115272 115323   52  2  1  124   99     6 0.916   2.86
 4.08 Intr + 117737 117864  128  0  2   92   97   113 0.987  12.08
 4.09 Intr + 120793 120932  140  0  2  111   83    67 0.524   6.84
 4.10 Intr + 130338 130383   46  0  1   74  101    41 0.202   1.49
 4.11 Intr + 133883 134084  202  1  1   61  111    72 0.364   4.74
 4.12 Intr + 154117 154258  142  2  1   37   60   113 0.422   1.89
 4.13 Term + 155251 155401  151  1  1   54   44   139 0.936   2.50
 4.14 PlyA + 155853 155858    6                               1.05

 5.00 Prom + 159690 159729   40                              -4.25
 5.01 Init + 160102 160189   88  0  1   48  100    16 0.655  -0.35
 5.02 Term + 161525 161625  101  0  2   67   48   124 0.760   3.61
 5.03 PlyA + 161743 161748    6                               1.05

 6.05 PlyA - 162581 162576    6                               1.05
 6.04 Term - 164371 164199  173  2  2   19   37   166 0.894   1.61
 6.03 Intr - 165021 164937   85  0  1   75   94    57 0.711   3.47
 6.02 Intr - 169567 169399  169  0  1   10  101   117 0.162   4.23
 6.01 Init - 181932 181778  155  0  2   81   89    72 0.226   6.10
 6.00 Prom - 182582 182543   40                              -4.75

 7.03 PlyA - 183000 182995    6                               1.05
 7.02 Term - 190577 190383  195  2  0   24   48   202 0.628   6.23
 7.01 Init - 194652 194590   63  0  0   86   87     7 0.366   1.60
 7.00 Prom - 195528 195489   40                              -1.45

 8.03 PlyA - 195825 195820    6                               1.05
 8.02 Term - 203457 203355  103  2  1   74   54    95 0.818   1.47
 8.01 Init - 207881 206824 1058  2  2   82   53   272 0.565  16.84
 8.00 Prom - 208005 207966   40                             -10.15

 9.03 PlyA - 208153 208148    6                               1.05
 9.02 Term - 210062 209039 1024  1  1   23   37   292 0.101   8.19
 9.01 Init - 210928 210501  428  1  2   59   42   286 0.091  16.92
 9.00 Prom - 212584 212545   40                              -6.05

10.00 Prom + 216309 216348   40                              -4.85
10.01 Init + 218909 218975   67  1  1   91  101    63 0.827   9.19
10.02 Term + 229526 229620   95  0  2   86   49    89 0.580   1.81
10.03 PlyA + 232706 232711    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_1|87_aa
MGRILLLVPMIPRRLAGRRAQLLNILLVLWENELQIDFQATIHLPAVDSARLCREMNCAK
HLWLPCEKGDAVLHQGAVYPLCVSGTE

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_1|264_bp
atggggaggattctcctcctagtaccaatgataccacgaagactggcaggaagaagagca
cagctgctgaacatattgttggtgctatgggaaaatgaattgcagattgactttcaagct
acaatccatttgccagctgtggactccgcacgcctatgcagagaaatgaattgtgctaag
catctctggcttccttgtgaaaaaggtgatgccgttctccatcagggtgctgtgtaccca
ctatgtgtgagcggtacagaatga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_2|456_aa
MCEEVVSSSRQTAPGNKNRELAAEIGRNKSPLKEKRMKTGPVTALILSIASGPRAAGYVH
RAGCWSASPGTILGVASPQGRTDFNKKRIPYENSNLSSYVHSDIHTNTNCGPNTEDFQLS
GNELWIQYSDIQGRNREVIKYEVVADEVRSVFQGGRPSGLRIQGEARSREQDLEVAIMRG
KIQRSGNSEVLLEQQHTSREKPLWEASTFGSQRTVSGGLGGSLKHPHLSVTGSPFSPGAN
RGPVENLDVYTHLAVRRQHPLSATRPSIKTFSPKYTQYPRCKRLCEHKEYSSSKENCPPG
PWANWLTTIDFLTRKLRIITPTLSIVFMGHPKAYYMKSNWLRLVLQQRCKLQACNLHASG
VSLDRCSRWTFRESRWKCTPCKTDWKVIFPPVATLGKAVLQLHDGPGLAAKSSKLGTEYL
SAQTSFLRRARRPLGNVVLRRSPRGSDLRKRGRPGR

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_2|1371_bp
atgtgtgaggaggtagtgtcaagttctaggcagacagcaccaggaaacaaaaacagagag
ttggctgcagaaattggaagaaataaatctccgctgaaggagaaaaggatgaagacaggg
ccagtcactgccctcattctttccattgcatcgggaccacgtgctgctggctatgttcac
agggcaggctgctggtctgcaagtccagggaccatacttggagtagcaagcccccaggga
aggacagactttaataagaagaggatcccctatgaaaattccaacttgagctcctatgtt
cattcagacattcatacaaataccaactgtgggccaaacactgaagatttccagctatct
ggtaatgaattgtggattcaatactcagacatccaaggcaggaacagagaagttatcaag
tatgaagtggtggcagatgaagtcagaagtgtctttcaaggagggagaccatcaggatta
aggatccaaggagaggcaagatctagggagcaagatctggaagttgccatcatgagaggt
aaaatccagaggtctggaaacagtgaagtgctcttagagcaacagcatacctcaagagaa
aagccactctgggaagcgtccacatttggaagccagagaactgtcagtggaggcctagga
ggaagcctgaagcacccccacctatcagtaacagggagtcccttctctccaggtgccaac
agaggccccgtggagaatctagatgtctacacccacctggcagtaaggaggcagcacccc
ctttcagccaccagaccctctatcaaaaccttctctcctaaatatacccaatatccacga
tgtaagcgactctgtgagcacaaagaatattcgtcctcaaaagaaaattgcccacccggg
ccatgggcaaattggttaacaacaattgatttcctcactcgtaaattaaggataataaca
ccaactttgtccatagtgtttatgggacatcctaaagcatactatatgaaaagtaactgg
cttaggctagttttgcaacaaagatgcaagctgcaggcgtgcaatcttcatgcaagtgga
gtttctcttgaccgatgcagcagatggactttcagggaatcaagatggaaatgcacacct
tgcaaaacagactggaaagtgatttttcccccagttgcaacgttagggaaggctgtgctg
cagctacatgatgggccagggctggcagctaaaagctccaaacttggaactgagtatctt
agtgcgcagacgtccttcctgcgaagggcgcgaaggccgctgggtaatgtagttctccgg
cggagtccacggggctctgatttaaggaaacgtggtcgccccggtcgctga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_3|87_aa
MTQKWFPSQELPTSLSGHIPRCSLPIQQRFQPTSKQVQLDGTSFLAVPDAFYLWTPALRL
LRHLKKASGTADMHNLGAKTCGTSCDQ

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_3|264_bp
atgactcagaagtggttcccatctcaagaactacccacgagtctcagtggacacattccc
cgatgcagccttccaatccagcagaggttccaaccaacttccaaacaggtgcaacttgat
ggcacctcatttttggctgtaccagatgccttctatctctggactcctgccctcagactt
ctccgacacctgaagaaagcttctgggacagctgacatgcacaacctgggagctaaaaca
tgtgggaccagctgtgaccaatga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_4|479_aa
MGPDFKGLAFLVEDMDEQMGSLNQHRKVQGTVATQRKGKKRNPGLKIPKEAFEQPQTSST
PPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV
NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQ
TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV
AKTIDAGCKPYMAIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQC
LKKNSKERPTYPELMTQATSTELIATSRTKGKVGLAGVGSSHQDNLRFGMSCFDSKKLLS
TLKDFQMSRGCGKANKHDGRVLVLMLFEKLYTVLKLAFSILVHQRCSIIAITWELINNTE
KNLEFNTIPRMTLQTGRRRVVLRQELAKPLDLSTAAELFIRSMPSLLALAIWQPEKSSQ

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_4|1440_bp
atgggccctgacttcaaagggcttgcatttttagtggaagacatggatgaacagatgggt
tcacttaatcagcataggaaggttcagggtactgtggcaacacagaggaaaggcaagaag
cgaaaccctggccttaaaattccaaaagaagcatttgaacaacctcagaccagttccaca
ccacctcgagatttagactccaaggcttgcatttctattggaaatcagaactttgaggtg
aaggcagatgacctggagcctataatggaactgggacgaggtgcgtacggggtggtggag
aagatgcggcacgtgcccagcgggcagatcatggcagtgaagcggatccgagccacagta
aatagccaggaacagaaacggctactgatggatttggatatttccatgaggacggtggac
tgtccattcactgtcaccttttatggcgcactgtttcgggagggtgatgtgtggatctgc
atggagctcatggatacatcactagataaattctacaaacaagttattgataaaggccag
acaattccagaggacatcttagggaaaatagcagtttctattgtaaaagcattagaacat
ttacatagtaagctgtctgtcattcacagagacgtcaagccttctaatgtactcatcaat
gctctcggtcaagtgaagatgtgcgattttggaatcagtggctacttggtggactctgtt
gctaaaacaattgatgcaggttgcaaaccatacatggccattgagttggccatccttcga
tttccctatgattcatggggaactccatttcagcagctcaaacaggtggtagaggagcca
tcgccacaactcccagcagacaagttctctgcagagtttgttgactttacctcacagtgc
ttaaagaagaattccaaagaacggcctacatacccagagctaatgactcaggcaacatct
actgagctaatagccactagcagaacaaaaggcaaggtggggctggcaggtgttggaagc
agtcaccaagataatctgaggtttggcatgtcctgttttgatagtaaaaagcttttaagt
acattaaaagatttccaaatgtccagaggatgtgggaaagctaataagcatgatggtaga
gtccttgtcctcatgttgtttgagaagctctacacggtcctgaaacttgccttctccatc
cttgtacatcaacgctgcagcatcattgcaatcacctgggagctcattaacaatacagag
aagaatctggagttcaacaccatccccagaatgaccctgcagactggaaggcgaagagtt
gttcttagacaagaacttgctaaaccacttgacctttcaacagctgcagaactgtttatc
aggagcatgccatctctcttggctcttgcaatttggcagccagaaaagtcaagccagtga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_5|62_aa
MQSVGQEDWEKEISGHVFLPFGNSLRNVKAWWTCVLSINASGLTGAEWTALDSIQIKVAV
GV

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_5|189_bp
atgcaaagtgtaggacaagaggattgggaaaaagagatctctggccatgtgttcctccct
tttgggaactccttaagaaatgtgaaagcctggtggacctgtgttctttccatcaatgca
agcggcctcactggtgctgaatggacagctctggatagcattcagatcaaggtggccgtg
ggtgtctag

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_6|193_aa
MGMVAWILDDTWKDEITKYVYMTGVDQALSRFSYLKDITNMIVTEKFLTTHSKDLNSRHE
TEGIVRRPEIEHYSNTGKKHEIPPNLTTHRTFTYQYENTSSTVKGFENTRMTLDDVGDTQ
ISAHEFKVCCLGEIFPATYRISLILQVKKLRHLKAKKSARACTVSHQESLTIKSRFDQYP
GLFPVEQCLIIDK

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_6|582_bp
atgggaatggtagcatggattctggacgatacatggaaggatgaaataacaaaatatgtg
tatatgactggagttgatcaagcactttctcgcttttcttacctcaaggatatcactaat
atgattgtgactgaaaaatttctaaccactcacagtaaggatttaaacagtagacatgaa
acagaaggaatagtcagaaggcctgaaattgagcactattcaaacacaggtaaaaagcat
gaaataccaccaaatctgaccacccatcgtacattcacttatcaatatgaaaacacttca
tccacggtaaagggctttgaaaatacaaggatgacactcgatgatgtaggagatacacaa
ataagtgctcatgagtttaaggtatgttgccttggagagatttttccagcaacctataga
attagcctcatcttacaagtgaagaaactaagacatctaaaggcgaagaaatctgcccga
gcttgtacagtttcacaccaagaaagcctgacaataaaatccaggttcgaccagtaccct
ggactcttccctgtggaacagtgcctgataattgataagtga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_7|85_aa
MRSNNKTMTTRAKVSRILAKKEHAPCRPRGNARVGVLVTREAPEGMLQSSLSSAVHGRQR
VISSVDSLTRCVGQLPSTSENKEPV

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_7|258_bp
atgaggtcaaacaacaaaacaatgacaaccagagcaaaggtatctaggatactggcaaaa
aaagagcatgctccatgcaggccccgtggcaatgccagggtgggggtgcttgtgacccgt
gaagccccagagggcatgttacaatcctctcttagctctgccgtccatggacggcagcgt
gttatcagctcagtagattccttgactcgttgtgtagggcagctgccctccaccagtgaa
aacaaagagccagtgtga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_8|386_aa
MKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMTF
FTELEKTTLKFIWNQKRARIAKSILSQKNKAGGIMLPDFKLYYKATVTKTAWYWYQNRDI
DQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPY
TKINSRWIKDLNVRPKTIKTLEENLGITIQDIGIGKDFMSKTPKAMATKDKIDKWDLIKL
KSFCTAKETTIRVNRQPTEWEKIFTTYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDM
NSHFSKEDIYAAKRHMKKCPSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRKLMGVAR
SYPRTQIGFVVSCGIWLAESEETTRS

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_8|1161_bp
atgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggataca
aacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatggcc
atactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttc
ttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagctcgcatc
gccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gatcaatggaacagaacagagccctcagaaataacgccgcatatctacaactatctgatc
tttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgc
tgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttat
acaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccataaaaacc
ctagaagaaaacctaggcattaccattcaggacataggcattggcaaagacttcatgtct
aaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgg
gagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctacaatgaa
ctcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaaggacatg
aacagtcacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaatgccca
tcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacacca
gttagaatggcaatcattaaaaagtcaggaaacaacagaaagctaatgggtgttgcacgc
agttatccaagaacacaaattggctttgtggtttcttgtggcatttggctagctgaatca
gaggaaacaactagaagctga

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_9|483_aa
MEVEMNKMKREGKFREKRIKRNEQSLQEIWDYVKRPNLHLIGVRESDRENGTKLENTLQD
IIQENFPNLARQANNQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
THKGKPIRLTADLSAETLQARREDPHRLKIKGWRKIYQANGKQKKAGVAILVSDKTDFKP
TKIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIVGDF
NTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLQPKSTEYTFFSAPHHTYSKIDH
ILGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWVHNEM
KAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKTDTLTSQLKELEK
QEQTHSKASRRQEITKIRAELKETDTQKTLQNINECRSWFFERINKIDRLLARLIKKKER
RIK

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_9|1452_bp
atggaagttgaaatgaataaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaacgaacaaagccttcaagaaatatgggactatgtgaaaagaccaaatctacatctg
attggtgtacgtgaaagtgacagggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacaatcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
acccacaaagggaagcccatcagactaacagcggatctctcggcagaaactctacaagcc
agaagagaagacccacataggctcaaaataaaaggatggaggaagatctaccaagcaaat
ggaaaacaaaaaaaggcaggggttgcaatcctagtctctgataaaacagactttaaacca
acaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaa
gaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaag
caagtcctgagtgacctacaaagagacttagactcccacacattaatagtgggagacttt
aacaccccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccag
gaattgaactcagctctgcaccaagcggacctaatagacatctacagaactctccagccc
aaatcaacagaatatacatttttttcagcaccacaccacacctattccaaaattgaccac
atacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactgt
ctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaaccgc
tcaactacatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatg
aaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacgtaccagaat
ctctgggacgcattcaaagcagtgtgtagagggaaattcatagcactaaatgcccacaag
agaaagcaggaaagatccaaaactgacaccctaacatcacaattaaaagaactagaaaag
caagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaa
ctgaaggaaacagacacacaaaaaacccttcaaaacattaatgaatgcaggagctggttt
tttgaaaggatcaacaaaattgatagactgctagcaagattaataaagaaaaaagagaga
agaatcaaatag

>gi568815581f:69405778_69641750|GENSCAN_predicted_peptide_10|53_aa
MDQPITSIKVLYPLADDEYLQDASSGQNYRTTRSKNLATSSAKVTKTFPNKST

>gi568815581f:69405778_69641750|GENSCAN_predicted_CDS_10|162_bp
atggaccaaccaataacttcaataaaagtgctgtatcccctggcagatgatgagtatctt
caagatgccagttctggtcagaactacaggacaaccaggtcgaaaaatctggcaacttct
tcagcaaaagtgacaaaaacatttccaaataagagcacatga