GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:13:05

Sequence gi568815590r:102550135_102752398 : 202264 bp : 46.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1594   1913  320  0  2   82   37    98 0.086   0.91
 1.02 Term +  10318  10750  433  1  1  115   39   280 0.983  20.57
 1.03 PlyA +  13453  13458    6                               1.05

 2.00 Prom +  20590  20629   40                              -2.36
 2.01 Init +  26004  26030   27  2  0   70   91    12 0.120  -0.54
 2.02 Term +  37806  37943  138  2  0  109   53    87 0.711   5.26
 2.03 PlyA +  38439  38444    6                               1.05

 3.00 Prom +  66758  66797   40                              -2.16
 3.01 Init +  72561  72629   69  2  0   63   77    77 0.169   5.15
 3.02 Term +  77503  77610  108  0  0   67   55    76 0.111   0.71
 3.03 PlyA +  79092  79097    6                               1.05

 4.06 PlyA -  82112  82107    6                               1.05
 4.05 Term -  84246  84163   84  0  0  132   48    42 0.179   2.25
 4.04 Intr - 100257 100052  206  1  2  104   55   120 0.178   9.22
 4.03 Intr - 101860 101015  846  2  0   23   81   337 0.273  17.85
 4.02 Intr - 105619 105432  188  0  2   40  115   176 0.900  14.83
 4.01 Init - 110754 110567  188  0  2   86  100    53 0.436   4.83
 4.00 Prom - 116279 116240   40                              -5.26

 5.00 Prom + 138092 138131   40                              -0.66
 5.01 Init + 138853 138922   70  0  1   96   78    49 0.771   5.92
 5.02 Intr + 162381 162466   86  1  2   81   40    59 0.517  -0.06
 5.03 Intr + 162771 162866   96  2  0   81  100    55 0.792   6.21
 5.04 Term + 165112 165228  117  0  0  108   43    29 0.550  -1.06
 5.05 PlyA + 166020 166025    6                               1.05

 6.04 PlyA - 166072 166067    6                               1.05
 6.03 Term - 166335 166213  123  0  0   27   41   132 0.183   0.78
 6.02 Intr - 166587 166537   51  0  0   39  131    28 0.137   1.30
 6.01 Init - 183317 183258   60  2  0   82   73   158 0.471  12.97
 6.00 Prom - 184164 184125   40                              -7.26

 7.06 PlyA - 185622 185617    6                               1.05
 7.05 Term - 187034 187027    8  0  2  130   44     0 0.138  -2.17
 7.04 Intr - 188275 188110  166  1  1   96   45    58 0.147   1.83
 7.03 Intr - 189561 189425  137  1  2   55   58    86 0.103   2.59
 7.02 Intr - 197597 197464  134  1  2  115  103    -2 0.274   4.29
 7.01 Init - 200328 200294   35  0  2   71   65    52 0.142   0.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_1|250_aa
MAALSCLLDSVRRDIKKVDRELRQLRCIDEFSTRCLCDLYMHPYCCCDLHPYPYCLCYSK
RSRSCGLCDLYPCCLCDYKLYCLRPSLRSLERKAIRAIEDEKRELAKLRRTTNRILASSC
CSSNILGSVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPC
VDEKDVTYSYGLGSCVKIESPCYPCTSPCSPCSPCSPCNPCSPCNPCSPYDPCNPCYPCG
SRFSCRKMIL

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_1|753_bp
atggctgcactgagttgtctcttggacagtgtcagaagggacataaagaaggtggacaga
gaactaaggcaactgagatgcatcgacgaatttagcacacggtgcctgtgcgacttgtat
atgcacccctattgctgctgtgacttgcacccatatccgtactgcttgtgctattccaag
cgatcacgctcttgcggcctgtgtgatctctacccatgttgcctgtgtgattataagctt
tactgtctgcgaccatctctcagaagtttggagaggaaagccatcagagccatagaagat
gagaagcgagagcttgccaaactgagaagaacaacaaatagaattctggcttcctcctgc
tgtagcagtaacattttaggatcggtgaatgtatgcggttttgaacccgatcaagtcaaa
gttcgagtgaaggatggaaaggtatgtgtgtcggctgagcgggagaacaggtacgactgc
cttggatcgaaaaagtacagctacatgaacatctgcaaagagttcagcttgccgccctgt
gtggatgagaaggatgtaacatactcctatgggctcggcagctgtgtcaagatcgagtct
ccttgctacccttgcacttctccttgcagcccctgcagcccctgcagcccctgcaacccc
tgcagcccctgcaacccgtgcagcccatatgatccttgcaacccgtgttatccctgtgga
agccgattttcctgtaggaagatgattttgtaa

>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_2|54_aa
MGTRNALVMDSPSKNFYKRDKMLKGLEEAKVNFVWRTNEGFLEEVALDLAHPDL

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_2|165_bp
atgggcactaggaatgcactggtgatggactcaccctccaaaaatttctataaaagggat
aaaatgctcaagggtttagaggaggctaaggttaattttgtctggagaaccaatgagggc
ttcctggaggaggtagcattggatctagctcatccagatctctga

>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_3|58_aa
MSGTLAGVKSFRPRAAIQKLLTLLTPQVVTVKHADSQRLHLTKFFPEGFEARAVSLPG

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_3|177_bp
atgtctgggacactggctggtgtaaagagcttcagaccaagagctgccatccagaagctc
ctcaccttgctgacaccccaggtggtcaccgtgaagcatgcagattctcagaggctgcat
ctcaccaagttcttccccgaagggtttgaggccagggcagtgtctctcccaggctga

>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_4|503_aa
MVEGEEAQSTSKSRENHLIKPSDLMRTYSLSREQHGGNCPDDPVAFHLIPNSTSGDYGDY
NSRLSGYLNGEGADGAERGGGGSGVECLRAPVCGQAASSLAASQLAAGGQAANHAQLRCL
SPADCAPSTVHFKSLSDTAKPHIAAPFKEEEKSPVSAPKLPKAQATSVIRHTADAQLCNH
QTCPMKAASILNYQNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCERNTVADVDEKASAA
LYDFSVPSSETVICRSQPAPVSPQQKSVLVSPPAVSAGGVPPMPVICQMVPLPANNPVVT
TVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQPVVQSSKPPVVSPNGTRLSPIAPA
PGFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCE
RRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSDHLTKHARRHLSAKKLPNWQMEASAG
TDWPDLGGVGETAHEWGYPQDAG

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_4|1512_bp
atggtggaaggggaagaggcacagagcacaagcaagagcagggaaaaccaccttataaaa
ccatcagatctcatgagaacttactcactatcacgagaacagcatgggggaaactgcccc
gatgatccagtcgccttccacctgatccccaactcgacaagtggggattatggggattac
aattcaaggctgagcggctacctgaatggggagggggcagacggcgctgagcgcggcggc
ggcgggagcggcgtcgagtgtctccgtgcgcccgtctgtggccaagcagccagcagccta
gcagccagtcagcttgccgccggcggccaagcagccaaccatgctcaacttcggtgcctc
tctccagcagactgcgcgccatctactgtacacttcaagtcactctcagatactgccaaa
cctcacattgccgcacctttcaaagaggaagaaaagagcccagtatctgcccccaaactc
cccaaagctcaggcaacaagtgtgattcgtcatacagctgatgcccagctatgtaaccac
cagacctgcccaatgaaagcagccagcatcctcaactatcagaacaattcttttagaaga
agaacccacctaaatgttgaggctgcaagaaagaacataccatgtgccgctgtgtcacca
aacagatccaaatgtgagagaaacacagtggcagatgttgatgagaaagcaagtgctgca
ctttatgacttttctgtgccttcctcagagacggtcatctgcaggtctcagccagcccct
gtgtccccacaacagaagtcagtgttggtctctccacctgcagtatctgcagggggagtg
ccacctatgccggtcatctgccagatggttccccttcctgccaacaaccctgttgtgaca
acagtcgttcccagcactcctcccagccagccaccagccgtttgcccccctgttgtgttc
atgggcacacaagtccccaaaggcgctgtcatgtttgtggtaccccagcccgttgtgcag
agttcaaagcctccggtggtgagcccgaatggcaccagactctctcccattgcccctgct
cctgggttttccccttcagcagcaaaagtcactcctcagattgattcatcaaggataagg
agtcacatctgtagccacccaggatgtggcaagacatactttaaaagttcccatctgaag
gcccacacgaggacgcacacaggagaaaagcctttcagctgtagctggaaaggttgtgaa
aggaggtttgcccgttctgatgaactgtccagacacaggcgaacccacacgggtgagaag
aaatttgcgtgccccatgtgtgaccggcggttcatgaggagtgaccatttgaccaagcat
gcccggcgccatctatcagccaagaagctaccaaactggcagatggaagcctctgctggt
acagactggccagatttaggtggagtgggagagacagcccatgaatggggatacccgcaa
gatgcaggctga

>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_5|122_aa
MASDALAEQAQQAEVAWDSGCWRGPFVVARWLPETVGIILSTSMRKEKTLDWLAAFYILV
PNSKKPESSEVDPGLLKHWEVIVKTKLPFTCLRSHLITLGLKIMTSFHKLFLAPCLGIPG
PR

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_5|369_bp
atggcctcagacgccctggcagagcaggcccagcaagcagaggttgcctgggacagcggc
tgctggagagggccctttgtggttgcaagatggctaccagagacagttggcattatcttg
tccacatctatgaggaaagagaagacgcttgactggttggctgcattctacattctggtg
cctaattccaagaaacctgagagttctgaggttgatcctggccttctaaagcactgggaa
gtcattgtcaagacaaagctaccttttacctgtctccggtcacatctgatcacactgggc
ttaaaaatcatgaccagtttccacaagctcttcctggctccttgcctgggcatcccaggc
cctcggtga

>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_6|77_aa
MLLLLLLLLLLGCFHLGQWNSLKLTLLALGHPTAIAPECEVCYTRAEPAQCYGRLGPDQQ
ESCPAEEVELVLVPECS

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_6|234_bp
atgctgctgctcctgctgctgctgctgctgcttggctgttttcatctgggccagtggaat
tctttgaaactcaccttgctggctttgggacaccccacggcgatcgctccggagtgtgag
gtgtgctacaccagggctgaacctgcccagtgctacgggcgtctgggacctgaccaacag
gagagctgcccggctgaggaagtagaactggtgctggttccagagtgttcatga

>gi568815590r:102550135_102752398|GENSCAN_predicted_peptide_7|159_aa
MAVESFNDEPQSPGQPYIRIGFHLGGVRTPRVLGQEGGGQVQTQAAGKVRLMERAAEGAF
AVQGTEPVAMPSSDLCDVTRLAPIGIGAFDCCYRTEVLNILKPWCSHSPATSSWMEGWMD
RPTPSPGFHDTALSHISRFVTAHFLLTGIAFSQLLTVEQ

>gi568815590r:102550135_102752398|GENSCAN_predicted_CDS_7|480_bp
atggcagttgagagcttcaatgatgagccccagagcccgggccagccttacattaggatt
gggtttcaccttggtggcgtcaggacccccagagtccttggtcaggagggtggggggcag
gtgcagacccaggcagcaggaaaggtgcggctcatggagcgggcagcagaaggagcattt
gctgtccagggcactgagcctgtggccatgccctcatctgacctctgtgatgtcacccgt
ctggcccctataggcattggggcttttgactgttgctacagaacagaagttcttaacatt
ttgaagccctggtgctcccacagcccagccacctcttcctggatggagggatggatggac
cgacctactccctcccctggtttccatgacactgcactttcccacatctccaggtttgtg
acagctcatttcctcctcactggcatcgccttctcccagcttctcaccgtggaacagtaa