GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:10:37

Sequence gi568815586r:102302510_102580381 : 277872 bp : 40.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    101     96    6                               1.05
 1.03 Term -   2445   2119  327  0  0   46   44   257 0.819  10.82
 1.02 Intr -   2960   2727  234  2  0   36   93   101 0.461   2.36
 1.01 Init -   3142   3089   54  1  0   82   47    56 0.512   2.23
 1.00 Prom -   5752   5713   40                              -3.65

 2.03 PlyA -   6268   6263    6                               1.05
 2.02 Term -   8711   8218  494  0  2   39   39   221 0.227   6.08
 2.01 Init -  10370  10070  301  2  1   88   -8   323 0.554  20.16
 2.00 Prom -  14249  14210   40                              -4.85

 3.00 Prom +  22920  22959   40                              -5.65
 3.01 Init +  30069  30300  232  2  1   46   86   166 0.821  10.67
 3.02 Intr +  47992  48068   77  2  2   77   42    65 0.007  -0.88
 3.03 Term +  59142  59348  207  2  0   36   42   249 0.231  11.46
 3.04 PlyA +  60191  60196    6                               1.05

 4.00 Prom +  60519  60558   40                             -11.14
 4.01 Init +  60724  60959  236  0  2   82   96   106 0.310   8.46
 4.02 Term +  61695  61866  172  0  1   98   43   136 0.991   6.42
 4.03 PlyA +  62958  62963    6                               1.05

 5.04 PlyA -  63436  63431    6                               1.05
 5.03 Term -  67546  67385  162  1  0   52   55    72 0.170  -2.75
 5.02 Intr -  67870  67680  191  2  2  -60   75   199 0.364   2.18
 5.01 Init -  68054  67976   79  2  1   75   88    68 0.496   6.77
 5.00 Prom -  68856  68817   40                              -4.15

 6.04 PlyA -  69014  69009    6                               1.05
 6.03 Term -  82324  81932  393  1  0   93   42   236 0.982  13.55
 6.02 Intr - 100693 100601   93  1  0   25   47   120 0.009   0.84
 6.01 Init - 117209 117000  210  2  0   77  121   147 0.905  15.73
 6.00 Prom - 118870 118831   40                              -6.45

 7.00 Prom + 119092 119131   40                              -5.85
 7.01 Init + 130152 130268  117  2  0  104   19    69 0.273   1.85
 7.02 Intr + 135749 136017  269  1  2   63   39   183 0.388   6.31
 7.03 Intr + 137755 137988  234  1  0   65   72   142 0.224   6.18
 7.04 Term + 145216 145528  313  1  1   48   34   148 0.264  -1.11
 7.05 PlyA + 146178 146183    6                               1.05

 8.04 PlyA - 146600 146595    6                               1.05
 8.03 Term - 147954 147668  287  1  2    3   48   265 0.023   8.58
 8.02 Intr - 173290 173134  157  1  1  111   89   147 0.439  15.76
 8.01 Init - 188740 188138  603  1  0   70   92   242 0.204  18.21
 8.00 Prom - 192076 192037   40                              -9.35

 9.09 PlyA - 192157 192152    6                               1.05
 9.08 Term - 193362 193120  243  0  0   20   32   204 0.249   2.92
 9.07 Intr - 198933 198856   78  0  0  106   95    33 0.396   4.63
 9.06 Intr - 210480 210324  157  2  1  104   89    81 0.928   8.89
 9.05 Intr - 216866 216813   54  1  0   82  108    67 0.103   5.28
 9.04 Intr - 217556 217502   55  0  1  104   80    -4 0.047  -2.48
 9.03 Intr - 220692 220639   54  1  0   93   89    20 0.231   0.63
 9.02 Intr - 221825 221696  130  2  1   73   36    92 0.166   1.85
 9.01 Init - 232462 232373   90  1  0   81   72   130 0.611  11.24
 9.00 Prom - 241599 241560   40                              -6.45

10.03 PlyA - 241913 241908    6                               1.05
10.02 Term - 254894 254671  224  0  2   86   38   149 0.846   5.80
10.01 Init - 259493 259277  217  2  1   76   61    95 0.392   4.50
10.00 Prom - 277176 277137   40                              -3.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  90669  90848  180  2  0   54   41   177 0.820   4.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_1|204_aa
MVALSNRKDEKQKGEREKSHQLSSFPFWGRKKLSVSHDPNSVTHSCQQRVQGRLFQRKQQ
LTSRSANPVLSQKGLYQEPSFVNVLQCIVVHSERSTFLSDPVRCKRPLTGSKPVNSRIKS
VPGPSPVSVTTPNPVWIRNLPKETQRAQNTNPWSSKIQEGTYPRCPAALRDQWTQVGPAG
TLRVYSALLGVTRSSTLDPASDII

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_1|615_bp
atggttgccctgagtaacagaaaagatgaaaaacagaaaggagagagagaaaagtcccat
cagctttcaagttttcccttttgggggaggaaaaagctctccgtgtcccacgatcctaat
tctgtcacccatagttgtcagcaaagagtgcaaggcagattattccaaagaaaacagcag
ttgacatcccgtagtgccaaccctgttcttagccaaaagggactttaccaagagccctca
tttgtaaatgtacttcagtgcattgttgttcattcggaacgttccactttcctttctgac
ccagtcagatgtaagaggcctctaactggatccaagccagttaattcccggatcaaatct
gttcctggacccagtccagtttctgtcacaactccaaacccagtttggatcagaaatttg
cccaaagaaactcagagagctcaaaacacaaatccgtggagctccaaaatccaagaggga
acttacccacgatgcccagctgctctgagagatcaatggacacaagtgggtcctgcaggt
accttgcgtgtttactcagcactcctgggggtcactagaagctccactttggatcctgct
tctgacattatctga

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_2|264_aa
MGKKQKRKTGNSKKQSASPPPKKRSSSPATEQSWMENDFDELREEVFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELPPHHTYSKIDHTVGSKALPS
KCKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFFE
ANENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTYSKAS
RRQEITKIRAELKEIETQKTLQKN

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_2|795_bp
atggggaaaaaacagaaaagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaagaaacgcagttcctcaccagcaacagaacaaagctggatggagaatgactttgac
gagctgagagaagaagtcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
ccaccacaccacacctattccaaaattgaccacacagttggaagtaaagctctccccagc
aaatgtaaaagaacagagattataacaaactatctctcagaccacagtgcaatcaaacta
gaactcaggattaagaatctcactcaaaaccgctcaactacatggaaactgaacaacctg
ctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgag
gccaacgagaacaaagacacaacataccagaatctctgggacgcattcaaagcagtgtgt
agagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgac
accctaacatcacaattaaaagaactagaaaagcaagagcaaacatattcaaaagctagc
agaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacc
cttcaaaaaaattaa

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_3|171_aa
MKKYSEENTKGVPGLSFNEELMGLYKQQHCQFKLKEMQKGLKEGRLLDSSGFVGEKMKES
FGCEHVLSFNKRKNDPKDSTLLKGERSKEGQSINASIGHFLHLEASHRWERERERERKKK
EEGRRSRNRRRKEEAEEEEEEEEEEDGAEENDEGRKEKKEKKGEERANFFK

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_3|516_bp
atgaaaaagtattcagaagagaacaccaagggtgtgcctggactgtcattcaatgaagag
cttatgggactatataagcagcaacattgccagtttaaactgaaggagatgcagaaagga
ctaaaggaaggaaggttattagactcatcaggatttgtgggggaaaagatgaaagagtct
tttggctgtgaacatgtgctatccttcaataagaggaaaaatgaccctaaagactccaca
ctcttaaaaggagagagaagcaaagaaggacagtcaatcaatgccagcattggtcatttt
ctgcaccttgaagcatcacacaggtgggagagagagagagaaagagagaggaagaagaag
gaagaaggaagaagaagcagaaacagaagaagaaaagaagaagcagaagaagaagaagaa
gaggaggaggaggaggacggagcagaagaaaacgacgaaggaaggaaggagaagaaggag
aagaaaggagaggagagggctaatttttttaaataa

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_4|135_aa
MTCVPAMRPETEYVQPDHGNPRLAVFVLKPALNQIVEFNSVYGQHRETPVPSAGPFGELM
PSLLQGAMFPRFHYQLVFRLYCWRKKPSSNTNKHKHKDKTGMDAELQGSHRSIEVMSGSN
SITSNFKGQQWLQGN

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_4|408_bp
atgacttgtgttccagccatgagacctgagacagagtacgtccagcctgaccatggcaac
cccaggcttgcagtattcgtgctgaagcctgctctgaatcagatagttgagttcaatagt
gtttatgggcaacatagagagactcctgtgccttctgctggaccctttggagagctaatg
ccatctctgttgcagggagctatgtttcccaggttccattaccaactggttttcagactt
tactgttggagaaaaaagccttccagtaatacaaataaacacaaacacaaagacaaaaca
gggatggatgcagaacttcaaggatcacatagatctattgaagtgatgagtggcagcaac
agcattacttcaaatttcaagggacagcaatggctgcagggcaattag

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_5|143_aa
MLIVIWTTKSRVISDGDEKILGNYSKEEISKWQNIREKAQHKSLENLQADNTIEKKNPFS
GEKFKPAGEICLSNKVQNVNHQDNGENVSRQLQLQPWLKGTKVQLGSWLHKVQAPSLGSF
HMVLSLQVHRSQELRFGNLCLDF

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_5|432_bp
atgctgatagtgatatggacaacaaagtccagggtgatctcagatggagatgagaaaatt
cttgggaactacagcaaagaagaaatttctaagtggcaaaacattcgagagaaagcacag
cataaaagtttggaaaatttgcaggctgacaatacgatagaaaagaaaaacccattttct
ggggagaaattcaagcctgctggagaaatttgcctaagtaacaaggtgcagaacgttaat
caccaagataacggggaaaatgtctccaggcagcttcagctccagccatggctaaaaggg
accaaggtacagcttggatcatggcttcataaagtgcaagctccaagccttggcagcttc
catatggtgttgagcctgcaggtgcacagaagtcaagaattgaggtttggaaatctctgc
ctagatttctga

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_6|231_aa
MRPLCLICADKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARSVRAQ
RHTDMPKTQKFIDEETETQEIATHTSLHSQKIEKLRVELSPLTPHYKGLTYLIHHIQLPK
NYKPYQKTKTSFEKTEQASEPNMAGILELSDQEFKTTVINMPRALMDKGDSIQEHMDNVS
KQMEILRKNEIEMLDIKNTITEIKNDFDGLLSRLDTVEERISEHEDTAIET

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_6|696_bp
atgaggccactctgtttgatttgtgcagacaagcccacagggtatggctccagcagtcgg
agggcgcctcagacaggcatcgtggatgagtgctgcttccggagctgtgatctaaggagg
ctggagatgtattgcgcacccctcaagcctgccaagtcagctcgctctgtccgtgcccag
cgccacaccgacatgcccaagacccagaagtttatagatgaagaaacggaaacacaagag
attgccactcatacaagtttacacagccagaaaatagaaaagctacgagttgagctcagc
ccacttaccccacactacaaggggcttacttacctgatacatcacatccaactgccaaaa
aattataaaccataccaaaagacaaaaacatcatttgaaaagacagagcaagcatcagaa
ccaaatatggcagggatattggaattatcagaccaggaatttaaaacaactgtgattaac
atgccaagggctctaatggataaaggagatagcatccaagaacacatggacaatgtaagc
aaacagatggaaatcctaagaaagaatgaaatagaaatgctagatatcaaaaacaccata
acagaaataaagaatgactttgatgggcttcttagtagactggacacagttgaggaaaga
atctctgagcatgaggatacagcaatagaaacttaa

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_7|310_aa
MGRNQDLSLASKGFLSRSKTKENEIDDKGLWSLNFENHQRHRRLACTLAAGDLESHPKCQ
ILCQRTPKDPRDLFSSAFTKELFKKFRAKSLGNGCKRYLILQSLKVHQPIQDGRGTAYSS
STVKKSVSCPHRERTALVLMGLPKYWDGPASPSCVGLEDVDSVGDSRFLQESWNVRAARH
FRANPDPSPCYSNQETENLEDQMILSRKLKLDRFLTSYTKINSRWIKDFNVRPKTIKTLE
ENLGNTIQDIGMDKHFLTKTPIAMARKAKTDKWDVIELKSFCTAKETIIRVNRQPTEWEK
IFSIYPSDKG

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_7|933_bp
atggggcgtaaccaagacttgagtttggcatccaaaggttttctaagtagaagtaaaacc
aaggaaaatgaaattgatgacaagggactctggtctctcaactttgaaaatcaccaaaga
catcgacgactggcctgcacattggctgctggtgatttggaatcacatcccaaatgccaa
atcctatgtcaaaggacacctaaggatccaagagatcttttcagctcagcattcaccaaa
gagttgttcaagaagttccgtgcaaaaagcttaggaaacggctgtaaacgttatcttatt
ttgcagagtcttaaagttcaccagcctattcaagatggtcgaggaacagcctattcaagt
tccacagtgaagaaatctgtttcatgcccccacagagagaggacagctttggtcctgatg
ggcctccccaaatactgggatgggcctgcttctccatcttgtgtgggattggaagatgtg
gattcagttggagatagccgatttctccaagaatcatggaatgtcagagctgcaagacat
ttcagagcgaatccagacccatctccttgctactcaaatcaggaaactgagaacttggaa
gaccaaatgattctctccagaaaattgaaactggaccgcttccttacatcttatacaaaa
attaactcaagatggattaaagactttaatgtaagacctaaaaccataaaaactctagaa
gaaaacctaggcaataccattcaggacataggcatggacaaacacttcctgactaaaaca
ccaatagcaatggcaagaaaagccaaaactgacaaatgggatgtaattgaactaaagagc
ttctgcacagcaaaagaaactatcatcagagtgaacaggcaacctacagaatgggagaaa
attttttcaatctatccatctgacaaagggtaa

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_8|348_aa
MDKLLDTYTLPRLNQEEVESLNKPITSTEIEAVINSLPTKKISGPDGFTAKFFQRYKEEL
VPFLLKLYQTREKEGLLPNSFYEASIILIPKPGTDTTKKENFRPISLMNVNAKILNKILA
NRIQQHIKKLIHDDQVSFIPGMQGWFSICKPINIIHHINRTDDKNHMIISRDAEKSFNKI
QQPFMLKTLNKLGISGTYLKIVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
ALQFVCGDRGFYFMEQCTMAVSIRGRELLGPSEQEMLHKESGKQRQKANTIPVTSKIVHL
ALYATLLLFVMEQFLGESHKSREIFSFEQQISELGKESMKFSEEKEKE

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_8|1047_bp
atggataaattgctggacacatacaccctgccaagactaaaccaggaagaagtcgaatcc
ctgaataaaccaataacaagtactgaaattgaggcagtaattaatagcctaccaactaaa
aaaatctcaggaccagatggattcacagccaaattcttccagaggtacaaagaggagctg
gtaccattccttctgaaactataccaaacaagagaaaaagagggactcctccctaactca
ttttatgaagccagcatcattctgataccaaaacctggcacagacacaacaaaaaaagaa
aatttcaggccaatatccctgatgaacgtcaatgcaaaaatcctcaataaaatactagca
aaccgaatccagcagcacatcaaaaagcttatccatgatgaccaagtcagcttcatccct
gggatgcaaggctggttcagcatatgcaaaccaataaacataatccatcacataaacaga
accgatgacaaaaaccacatgattatctcaagagatgcagaaaagtccttcaataaaatt
caacagcccttcatgctaaaaactctcaataaactaggtatcagtggaacatatctcaaa
atagtgaagatgcacaccatgtcctcctcgcatctcttctacctggcgctgtgcctgctc
accttcaccagctctgccacggctggaccggagacgctctgcggggctgagctggtggat
gctcttcagttcgtgtgtggagacaggggcttttatttcatggagcagtgtacgatggct
gtttccattcgtggcagagagctgctggggccatcggagcaagagatgcttcacaaagaa
agtggaaagcagcgccaaaaggcaaatacaattcctgtcacatccaaaatagttcattta
gctctttatgctactctcttactctttgtcatggagcaatttctaggagagtcgcataaa
agtagggagatttttagctttgagcagcaaataagtgaactgggcaaggagagcatgaaa
tttagtgaggaaaaagaaaaagaatga

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_9|286_aa
MWDELTKPTRESNESNGSWTSIGSQTMERGPLTLGTVWAEMRNGDEHFARHRTSPTTGIY
PAPNVNNAKVENPDLSGHDVRQTIYFTKIMTVRWVRWDRSNVTIWVHTLSPRELFQAHGN
IGVKLRTKIRVLVLISVSVLGAMLPAEQAVLLWIYLHTFPSKLFPLPIPLPLPTAANTQM
SFTKALWRHQINMPKSLSTLNEKAFPLPLDVFAFQSSGVNLITLAPRREAHQSRMWDCYL
DGNPSWERACQWVGSALTPARSKSEVTIFLVKSQGCEAREQLIKGN

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_9|861_bp
atgtgggatgaattaactaagccaaccagggaaagcaacgaaagcaacggcagttggact
tcaatcggttcccagacaatggagcgtgggcctcttactcttggtactgtgtgggcagag
atgaggaatggtgatgaacattttgcaaggcacaggacatcccccacaacaggtatttat
ccagccccaaatgtgaataatgccaaggttgaaaatccagatctatcaggacacgatgtt
aggcagacaatttattttactaagataatgacagtcagatgggttaggtgggaccgatca
aatgtcacaatttgggttcacacactcagtccacgagaacttttccaggcacatggaaat
attggcgtcaaattaagaaccaaaatcagggtcctggtccttatctcagtctctgtgctt
ggggccatgctccctgctgaacaggcagtccttctctggatctacctccacaccttccca
tcaaagctttttccattgccaattccactacctttgcccacagcagccaacacccagatg
agcttcactaaagctctttggcgtcatcaaataaacatgcccaaatctctttcaacttta
aatgaaaaggctttccctttgcctctggatgtcttcgctttccaaagcagtggagtgaat
ttaataactttggcacctcgcagagaagctcaccagtccaggatgtgggattgctacctc
gatgggaacccaagctgggaaagagcctgccagtgggttggcagtgctctgacgcctgca
agatccaaatctgaagtcaccattttccttgtgaagagtcagggatgtgaagccagagag
cagttgattaaagggaactag

>gi568815586r:102302510_102580381|GENSCAN_predicted_peptide_10|146_aa
MPISCYGGAGKVEAQALENSELQPLNVDSKGCISNLNMDLEQVQTKRMKLLFNKDLSTQR
EDFCVKISEIWPDASFQLQRVLNCSAVLELNEKLSANPVPSFSPHRRADTTRFEDSGWLW
VRSGFGLVVWHELQKMRNEHTDVNPY

>gi568815586r:102302510_102580381|GENSCAN_predicted_CDS_10|441_bp
atgcctatttcctgctatggtggtgcagggaaggtagaagcacaggctctagagaattca
gaattgcaacctttaaatgtagatagcaaaggctgcatttcgaatctaaatatggacctt
gagcaagtacagacaaagagaatgaagcttctttttaataaggatcttagtacccagaga
gaagacttttgtgtgaaaatatcagagatttggccagatgcctccttccaactccaaagg
gtgctcaactgctcagcagttctagaacttaatgagaaactctctgctaaccctgtccca
agtttttctccccaccgcagagcagatacaacccgctttgaagactcgggttggctctgg
gttagaagtgggtttggattggttgtgtggcatgagctgcagaagatgaggaatgagcat
actgacgtgaacccatattag