GENSCAN 1.0	Date run:  3-Nov-116	Time: 13:53:57

Sequence gi568815578r:36898762_37195928 : 297167 bp : 44.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -   1500   1495    6                              -0.45
 1.12 Term -   3378   3293   86  1  2   96   47    50 0.370  -0.48
 1.11 Intr -  12572  12457  116  1  2   42  110   100 0.963   7.69
 1.10 Intr -  13791  13700   92  0  2  103   64    82 0.988   6.09
 1.09 Intr -  18069  17961  109  2  1   76  121    64 0.998   8.79
 1.08 Intr -  18288  18188  101  0  2   82   85    21 0.979   0.11
 1.07 Intr -  20758  20603  156  1  0   64  111   107 0.907  10.81
 1.06 Intr -  28491  28421   71  1  2   60   92    23 0.833  -1.20
 1.05 Intr -  32114  31999  116  1  2   99  111    53 0.983   8.79
 1.04 Intr -  36428  36268  161  2  2   43   90   128 0.993   7.29
 1.03 Intr -  42350  42278   73  1  1   37  116    26 0.132  -0.29
 1.02 Intr -  48043  47977   67  2  1   93  116     8 0.160   2.06
 1.01 Init -  52882  52675  208  1  1   91   59   119 0.245   8.28
 1.00 Prom -  59664  59625   40                              -3.46

 2.00 Prom +  60688  60727   40                              -6.86
 2.01 Init +  61315  61378   64  0  1   94   53    46 0.451   3.01
 2.02 Intr +  64252  64285   34  2  1   81  110    59 0.589   4.68
 2.03 Intr +  85129  85198   70  1  1   94  100    24 0.294   3.38
 2.04 Intr +  94385  94762  378  1  0    4   47   199 0.114   2.56
 2.05 Intr +  95689  95805  117  0  0   69   54   114 0.744   6.76
 2.06 Term +  95939  96109  171  1  0   11   48    61 0.185  -7.77
 2.07 PlyA +  97021  97026    6                               1.05

 3.39 PlyA -  97621  97616    6                               1.05
 3.38 Term - 100168  99998  171  1  0   86   35   204 0.992  12.73
 3.37 Intr - 105030 104941   90  0  0   43  116    66 0.805   5.09
 3.36 Intr - 108798 108650  149  1  2   68   80    62 0.760   3.35
 3.35 Intr - 136747 136481  267  2  0   92   52   105 0.826   4.80
 3.34 Intr - 141524 141392  133  2  1   87   92    66 0.993   7.12
 3.33 Intr - 145489 145325  165  1  0  121   81    67 0.986   9.46
 3.32 Intr - 148429 148292  138  1  0  128  100    21 0.708   7.96
 3.31 Intr - 162508 162413   96  1  0   96   39    61 0.249   2.21
 3.30 Intr - 163509 163323  187  2  1   58   24   183 0.472   8.59
 3.29 Intr - 166712 166663   50  2  2   73   67    23 0.949  -3.82
 3.28 Intr - 168123 167963  161  1  2   65   79   142 0.992  10.71
 3.27 Intr - 168360 168232  129  1  0   69  116     9 0.820   2.47
 3.26 Intr - 173982 173835  148  0  1   64   19    73 0.001  -2.19
 3.25 Intr - 196478 196340  139  1  1   98   27    79 0.630   3.27
 3.24 Intr - 197264 196998  267  1  0   24   75   353 0.140  24.25
 3.23 Intr - 204074 203939  136  0  1   67   28   112 0.167   2.73
 3.22 Intr - 209903 209838   66  0  0   91  127    38 0.970   6.88
 3.21 Intr - 213685 213559  127  1  1   88   47    64 0.792   2.55
 3.20 Intr - 215384 215229  156  2  0   95   94   140 0.999  15.51
 3.19 Intr - 216576 216412  165  0  0   38   58   132 0.469   5.36
 3.18 Intr - 221857 221743  115  0  1   92   94    30 0.730   4.45
 3.17 Intr - 225038 224848  191  2  2  104   29   156 0.476   9.68
 3.16 Intr - 230406 230271  136  2  1   58   61    82 0.874   3.07
 3.15 Intr - 239209 239049  161  1  2  111   92    12 0.539   2.69
 3.14 Intr - 242553 242401  153  0  0   62   92    50 0.842   3.07
 3.13 Intr - 245080 244956  125  2  2   84   90    96 0.996   9.70
 3.12 Intr - 249148 249013  136  1  1   84   56    36 0.931   0.14
 3.11 Intr - 256406 256302  105  2  0   98  105    83 0.910  11.41
 3.10 Intr - 259194 259099   96  0  0   81   92    15 0.709   1.41
 3.09 Intr - 260275 260131  145  0  1   52   78    83 0.956   3.98
 3.08 Intr - 261415 261336   80  1  2  136   64    78 0.978   8.55
 3.07 Intr - 262905 262868   38  1  2   83  100    29 0.698   1.58
 3.06 Intr - 268779 268696   84  1  0   50   70    77 0.568   1.89
 3.05 Intr - 273296 273162  135  0  0   28   89   124 0.843   7.04
 3.04 Intr - 275355 275234  122  2  2  112   98    88 0.994  12.34
 3.03 Intr - 280702 280462  241  2  1  102   82    67 0.327   4.11
 3.02 Intr - 285374 285164  211  2  1   52   84    93 0.001   3.79
 3.01 Init - 293749 293705   45  1  0   63   96    43 0.068   3.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  42283  42278    6  1  0   63  116    10 0.812   1.61
S.002 Intr + 285419 285612  194  0  2   47  116   216 0.857  19.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:36898762_37195928|GENSCAN_predicted_peptide_1|451_aa
MQRADSEQPSKRPRCDDSPRTPSNTPSAEADWSPGLELHPDYKTWGPEQVCSFLRRGGFE
EPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQRLVQIHVDTMKVIND
PIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVH
ALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMM
FEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLESPVEDSLWPYKGRPENKSFLYEI
VSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLY
DMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYT
KLTELQPCFPPPAVFILMSNPTFGSYFQDKL

>gi568815578r:36898762_37195928|GENSCAN_predicted_CDS_1|1356_bp
atgcagcgagccgattccgagcagccctccaagcgtccccgttgcgatgacagcccgaga
accccctcaaacaccccttccgcagaggcagactggtccccgggcctggaactccatccc
gactacaagacatggggtccggagcaggtgtgctccttcctcaggcgcggtggctttgaa
gagccggtgctgctgaagaacatccgagaaaatgaaatcacaggcgcattactgccttgt
cttgatgagtctcgttttgaaaatcttggagtaagttccttgggggagaggaagaagctg
cttagttatatccagcgattggttcaaatccacgttgatacaatgaaggtaattaatgat
cctatccatggccacattgagctccaccctctcctcgtccgaatcattgatacacctcaa
tttcaacgtcttcgatacatcaaacagctgggaggtggttactatgtttttccaggagct
tcacacaatcgatttgagcatagtctaggggtggggtatctagcaggatgtctagttcac
gcactgggtgaaaaacaaccagagctgcagataagtgaacgagatgttctctgtgttcag
attgctggactttgtcatgatctcggtcatgggccattttctcacatgtttgatggacga
tttattccacttgctcgcccggaggtgaaatggacgcatgaacaaggctcagttatgatg
tttgagcaccttattaattctaatggaattaagcctgtcatggaacaatatggtctcatc
cctgaagaagatatttgctttataaaggaacaaattgtaggaccacttgaatcacctgtc
gaagattcattgtggccatataaagggcgtcctgaaaacaaaagcttcctttatgagata
gtatctaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgattacaagcgctttattaagtttgcccgtgtc
tgtgaagtagacaatgagttgcgtatttgtgctagagataaggaagttggaaatctgtat
gacatgttccacactcgcaactctttacaccgtagagcttatcaacacaaagttggcaac
attattgatacaatgattacagatgctttcctcaaagcagatgactacatagagattaca
ggtgctggaggaaaaaagtatcgcatttctacagcaattgacgacatggaagcctatact
aagctgacagaactccaaccatgcttcccacctccagctgtattcatcctcatgagtaac
ccaacctttggctcctatttccaagataaactatag

>gi568815578r:36898762_37195928|GENSCAN_predicted_peptide_2|277_aa
MRPIHTSAITGNILSIRRMPSHSLQQLQDFDHRPLESALPYTKPVSSPSRLCLLEEKWGA
AEKIPEYVEVTLELGNRQRLEQFGGSEEDRKMWDSFEFPRNLLNGFDQNADNNMDNEIQH
EVLLDGDKKLVVNWSKGDSCYVLADLLVAFCPCPRDLWNFELQRDDLRYLVEEISKQQSI
QEPGNLVPYVLAAPAVTEGVNVELGPWLQSMYASSLGSFHMCGKEMWGWSPHKESLLGHC
LVELREEGHCPPDPRMIDPLIACTVCLEKSQTLNTIL

>gi568815578r:36898762_37195928|GENSCAN_predicted_CDS_2|834_bp
atgaggccgattcacacttcagctatcacaggaaatatcctctccatacggcgtatgccg
agtcatagcttgcagcagctgcaagattttgaccacagacctttggaatcagccctgccc
tacacaaagcccgttagttctccctccaggctctgcttgttagaggaaaagtggggtgct
gctgaaaagatacctgaatatgtggaagtgactttggaactgggaaataggcagaggttg
gaacaatttggagggtcagaagaagacaggaaaatgtgggacagttttgaatttcctaga
aacttgctgaatggctttgatcaaaatgctgataataatatggacaatgaaattcagcat
gaagtgctcttagatggagataagaaacttgttgtgaactggagcaaaggtgactcttgt
tatgttttagcagatctactggtggcattttgcccctgccctagagatctgtggaacttt
gaacttcagagagatgatttaaggtatctggtggaagaaatttctaagcagcaaagcatt
caagagcctgggaacttggtgccctacgtcctagctgctccagccgtgactgaaggggtc
aatgtagagcttgggccatggcttcagagcatgtacgcctcaagccttggcagctttcac
atgtgtggaaaagagatgtggggttggagtccccacaaagagtcgctactggggcactgc
ctagtggagctgagagaagagggccactgtcctccagaccccagaatgatagatccactg
atagcttgcactgtgtgcctggaaaaatcgcagacactcaacaccatcctgtga

>gi568815578r:36898762_37195928|GENSCAN_predicted_peptide_3|1752_aa
MAALQCKIVAFLADRVLYTVPMMMHTKIWEPNHMGKGEGIQGFNLRRSLGKAGSLLFNWW
KDSPPSSLQASKAQALSYYSHLKDVWEGDPAWPALERRLVTSRGRQPSPQSHAQLLTRRR
HSSEQVPPESEPRADFRSGKWLQEPATGDARDSRQALRARMSSKHRICSQEEVVIPCAYD
SDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEPLSHSPRHLTQQDPLSEAIVE
KLIQSIQKVFNVPDSSRNCLGNLGYKDKEDKIPIYAAKQGKRNPLEAAETQKVLVQEERP
HSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTIKSIITLPSVRTLTQIQEIMP
NGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKHLVPWLQSVKDHERERATASM
AQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKVAEEAAEGIHSLLHITLRLKY
ITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIAQVFEGFLDSNELCQFIMTTF
DTLKTLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVICAQLSIISQPRVRQQIINTV
SLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELPSTTWILWRLLRKLQKCHNEP
AQEKMAYVAVAATDALYEVFLGNRLRAATFRLFPQLLMTLLIQIHHSIGLTMSDVDIPSG
LYTEQEVPSEVTPLCALLERNQLLAQKVMYLLVPLLNRGNDKHKLTSAGFFVEREDIKSL
LPYIVDSLRETDEKIVLSAIQILLQLVRTMDFTTLAAMMRTLFSLFGDVRSDVHRFSVTL
FGAAIKSVKNPDKKSIENQVLDSLVPLLLYSQDENDAVAEESRQVLTICAQFLKWKLPQE
VYSKDPWHIKPTEAGTICRFFVCLLSKYMDHNELRRMGTDWIEDDLRDLLCDPEPSLCII
ASQTLLLVQMARAEPKPKQRVNWLQKLMGRFSRALAQVVVGSAPGREKEVGGRGAQPAGP
EGMFEDKPHAEGAAVVAAAGEALQALCQELNLDEGSAAEALDDFTAIRGNYSLEVSGSRV
ELPVAVQQFDQSQCAHEADLSPTFPPPSEHRPDALHQCLALNKTNEIDPALRIHHFFTSL
HQQLQIQNLKQMYLIKDIRLYAFILASSKADLFSGNFRMIGDDLVNSYHLLLCCLDLIFA
NAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPPCIIAVLCELHDGLLVEAKGIKEHYF
KPYISKLFDRKILKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIG
TPRKFTRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASAT
QSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLNLQPFYFYKVIEVVIRSEEGL
SRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEEVIFPNNFETGNGGNVQG
HLPLMPMSPLMHPRVKEVRTDSGSLRRDMQPLSPISVHERYSSPTAGSAKRRLFGEDPPK
EMLMDKIITEGTKLKIAPSSSITAENVSILPGQTLLTMATAPVTGTTGHKVTIPLHDLED
ATKTPDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLANQDHMHSIYISPHKNGSGL
TPRSALLYKFNGSPSKSLKDINNMIRQGEQRTKKRVIAIDSDAESPAKRVCQENDDVLLK
RLQDVVSERANH

>gi568815578r:36898762_37195928|GENSCAN_predicted_CDS_3|5259_bp
atggcagcactccagtgcaagattgtggctttcttggcagacagggtgctatacacagtc
ccaatgatgatgcacaccaagatctgggaaccaaatcacatggggaagggcgagggaatc
caggggtttaacctgaggagaagccttgggaaggcagggagcctgctcttcaactggtgg
aaggacagtcctcccagcagcctccaagcatctaaagcacaggccttatcctactattcc
catctgaaagatgtctgggaaggggatcccgcctggccggctctcgagcggcgactagta
acctcccgcgggcgacagccctctccccaaagccacgcgcaactcctcacccggcggcgc
cattcctccgagcaggtcccgccggagtccgagccgcgggctgacttccgctcgggaaag
tggctccaagagcccgccacaggggacgccagggactcgcggcaggctctgcgggccagg
atgagttctaagcacaggatctgtagtcaggaagaagtagtgatcccctgtgcctatgac
agtgattcagaaagtgtggatttggagctgagcaacttagagattattaaaaaaggctca
agtagcattgaactgacagacttggacatccctgacatccctggactccattgtgagccc
ctgtcacatagccccagacacctgacccaacaggacccgctcagtgaggccattgttgag
aaactgatccagtccatccagaaggttttcaatgtgcctgacagttccaggaactgtctt
gggaatttgggctacaaagacaaagaagacaaaatccctatttatgcagccaagcaaggt
aagagaaatcctctagaagcagctgaaacacaaaaggtactggtacaagaggaacgcccg
cattctctgtccagttccatgcgccaggaggtctttgtcaccatcgctgatctcagttac
caagatgtccatttgctgttgggctctgaagatcgagctgagttgttcagtcttaccatc
aagagtataatcactctgccctctgtaaggacccttacccagatacaggaaatcatgccc
aatgggacctgcaacacagagtgtctttacaggcagacgtttcaggcattctctgagatg
ctccagagtttggtggtaaaagacccacatttggaaaatcttgacaccattattaagcac
ttggtcccctggttacagtcagtcaaagaccatgagcgggaacgggccacggccagcatg
gctcaagttctgaagtgcctatccaaacatctcaacttgaagcttccactgcgattccaa
agacttggacacctagtggctctgatggcactgctctgtggggacccacaggaaaaggtg
gctgaggaggctgcagagggcattcactccctgctgcatatcaccctgaggctgaagtat
atcactcatgacaagaaagatcagcaaaacttgaaaagagcattgacaaaatgtcgagaa
ttcctggagctccacagctctgccgctaaatgcttctacaactgtcccttcagaattgcc
caggtctttgaaggttttcttgattcaaatgagctctgccagtttataatgactacattt
gataccctgaaaaccctgaaacatccctgcatccagcgatcagcaggagaattactgcta
actttggcaaaaaatacagagtcccaatttgagaaggtgccagaaattatgggagttatc
tgtgcccagttatccataatcagccagcctagagtccgccaacaaatcataaataccgtg
agtttatttatatccagacccaagtacacagatatagtgctcagcttccttctgtgtcat
ccagtgccgtataacaggcacctggctgaggtgtggagaatgctgtcggtggagcttccc
agcacgacctggattctgtggaggctcctgaggaagctgcagaaatgccataatgagcct
gcacaggagaagatggcatatgtggctgtggctgcaacagatgccctttatgaggtgttt
ttgggaaacaggcttcgagcagctacgttccgactctttcctcagcttctcatgacactg
cttatccagattcatcacagcatcggcctcaccatgtctgatgtcgacatcccaagtggc
ctgtacacagaacaggaagtgccttcagaggtcacccctttgtgcgcattgctggaaaga
aatcagctccttgcacagaaggtcatgtacttattagtccctcttcttaaccgagggaat
gataaacataaactcacatctgcaggcttttttgtggagagagaagacatcaagagcctg
ttgccatacattgtagacagcttgcgtgaaaccgatgagaagatcgttctgtcagccatc
cagatactcctgcaacttgttagaacaatggatttcactaccctggctgccatgatgagg
accctgttctccttatttggtgatgtgagatctgatgttcatcgtttctccgtgactctc
tttggagccgccataaagtctgtaaaaaacccagataagaagagtatagagaaccaagtc
ctggacagcttggtcccactacttctgtattctcaggatgaaaatgatgcagtagctgag
gagagcaggcaagtcctaactatatgtgcccagttcctgaagtggaagctgccccaagaa
gtgtactccaaagatccctggcacatcaaacctactgaagcaggaacaatctgcagattc
tttgtatgccttttatcgaagtacatggatcacaatgagctcaggaggatgggtactgac
tggatagaggacgatctgagagacctgctgtgtgaccctgagccctcgctgtgcatcatc
gcttcccagactctgttactagtccagatggcgagggccgaaccaaaacctaagcagaga
gtgaactggttgcagaagctcatgggcagattttcgcgcgctttggcgcaggtggttgtg
ggtagcgcgcctgggagggagaaagaagtcgggggccgtggcgcgcagcccgcggggcct
gaagggatgttcgaggacaagccccacgctgagggggcggcggtggtcgccgcagccggg
gaggcgctacaggccctgtgccaggagctgaacctggacgaggggagcgcggccgaagcc
ctggacgactttactgccatccgaggcaactacagcctagaggtgagcggcagcagggtg
gagctgccggtcgctgtgcagcagtttgatcaaagccaatgtgcacacgaagctgatctc
agccctacgtttcctcctccgtcagagcatcgtcctgatgctttgcatcagtgtctggct
ctgaataaaacaaatgagattgatcctgctctaagaattcaccacttcttcacttctctg
caccagcagcttcagattcaaaatctcaagcagatgtatctgataaaggatatcagatta
tatgccttcatcctagcttccagtaaagctgatctgtttagtggtaattttcggatgatt
ggggatgacttagtaaactcttatcatttacttctatgctgcttggatctgatttttgcc
aatgcgattatgtgcccaaatagacaagacttgctaaatccatcatttaaaggtttacca
tctgattttcatactgctgactttacggcttctgaagagccaccctgcatcattgctgta
ctgtgtgaactgcatgatggacttctcgtagaagcaaaaggaataaaggagcactacttt
aagccatatatttcaaaactctttgacaggaagatattaaaaggagaatgcctcctggac
ctttcaagttttactgataatagcaaagcagtgaataaggagtatgaagagtatgttcta
actgttggtgattttgatgagaggatctttttgggagcagacgcagaagaggaaattgga
acacctcgaaagttcactcgtgacaccccattagggaaactgacagcacaggctaatgtg
gagtataaccttcaacagcactttgaaaaaaaaaggtcatttgcaccttctaccccactg
accggacggagatatttacgagaaaaagaagcagtcattactcctgttgcatcagccacc
caaagtgttcttttagagcaagatatatttcatcgttccttgatggcttgttgtttggaa
attgtgctctttgcctatagctcacctcgtacttttccttggattattgaagttctcaac
ttgcaaccattttacttttataaggttattgaggtggtgatccgctcagaagaggggctc
tcaagggacatggtgaaacacctaaacagcattgaagaacagattttggagagtttagca
tggagtcacgattctgcactgtgggaggctctccaggtttctgcaaacaaagttcctacc
tgtgaagaagttatattcccaaataactttgaaacaggaaatggaggaaatgtgcaggga
catcttcccctgatgccaatgtctcctctaatgcacccaagagtcaaggaagttcgaact
gacagtgggagtcttcgaagagatatgcaaccattgtctccaatttctgtccatgaacgc
tacagttctcctaccgcagggagtgctaagagaagactctttggagaggaccccccaaag
gaaatgcttatggacaagatcataacagaaggaacaaaattgaaaatcgctccttcttca
agcattactgctgaaaatgtatcaattttacctggtcaaactcttctaacaatggccaca
gccccagtaacaggaacaacaggacataaagttacaattccattacatgacttagaagat
gctacaaaaacacctgactgttccagtggaccagtgaaagaggaaagaggtgatcttata
aaattttacaatacaatatatgtaggaagagtgaagtcatttgcactgaaatacgacttg
gcgaatcaggaccatatgcactccatttatatttccccgcacaagaatgggtcaggcctt
acaccaagaagcgctctgctgtacaagttcaatggcagcccttctaagagtttgaaagat
atcaacaacatgataaggcaaggtgagcagagaaccaagaagcgagtaatagccatcgat
agtgatgcagaatcccctgccaaacgcgtctgtcaagaaaatgatgacgttttactgaaa
cgactacaggatgttgtcagtgaaagagcaaatcattaa