GENSCAN 1.0	Date run:  3-Nov-116	Time: 13:29:31

Sequence gi568815597f:116284013_116503976 : 219964 bp : 43.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  13966  14514  549  0  0   75   42   188 0.601   7.01
 1.02 PlyA +  15968  15973    6                               1.05

 2.00 Prom +  16731  16770   40                              -4.36
 2.01 Init +  25410  25468   59  2  2   66   92    32 0.450   2.19
 2.02 Intr +  33312  33402   91  0  1   59   75    68 0.216   2.60
 2.03 Intr +  42765  42849   85  2  1   62   69    67 0.089   1.59
 2.04 Intr +  51431  51475   45  0  0   65  100    50 0.072   2.28
 2.05 Intr +  75499  75622  124  2  1   40   19    94 0.018  -2.66
 2.06 Intr +  79711  79785   75  1  0   78   64   111 0.111   6.33
 2.07 Intr +  89463  89511   49  0  1   85   84    42 0.000   2.18
 2.08 Intr + 100002 100112  111  2  0  120  115   147 0.994  21.18
 2.09 Intr + 100771 100830   60  0  0  118   79    41 0.971   5.13
 2.10 Intr + 103276 103479  204  0  0   74   82    67 0.940   4.10
 2.11 Intr + 104119 104232  114  0  0  107   81    37 0.977   5.54
 2.12 Intr + 104626 104760  135  0  0   46   65   179 0.999  12.16
 2.13 Intr + 104890 105007  118  0  1   87  102    55 0.999   6.84
 2.14 Intr + 105427 105695  269  2  2   86  107   224 0.999  21.35
 2.15 Intr + 106201 106399  199  0  1   78   79   220 0.988  19.02
 2.16 Intr + 106770 106879  110  1  2   85   91   -22 0.959  -2.20
 2.17 Intr + 108842 108976  135  1  0   69   41   123 0.974   6.46
 2.18 Intr + 109519 109711  193  0  1   49   57   270 0.954  19.07
 2.19 Intr + 111098 111273  176  0  2   99   67   233 0.901  21.96
 2.20 Intr + 112586 112722  137  1  2   99  110   220 0.999  24.67
 2.21 Intr + 113876 114026  151  2  1   97   76   166 0.997  16.46
 2.22 Intr + 114609 114777  169  2  1   65  100   219 0.999  20.32
 2.23 Intr + 114918 115072  155  1  2   64  101    73 0.999   5.99
 2.24 Intr + 115408 115531  124  0  1   99   99   186 0.999  20.96
 2.25 Intr + 116849 116994  146  0  2   60   92   244 0.999  22.00
 2.26 Intr + 117118 117248  131  0  2   96  100   141 0.992  15.59
 2.27 Intr + 117542 117643  102  2  0   79  108    37 0.915   4.09
 2.28 Intr + 122223 122386  164  0  2   30  111    43 0.502   0.42
 2.29 Term + 122866 122903   38  2  2  108   54    34 0.291  -0.50
 2.30 PlyA + 123258 123263    6                               1.05

 3.00 Prom + 129748 129787   40                              -2.96
 3.01 Init + 134546 134634   89  1  2   53    9   178 0.592   4.52
 3.02 Term + 137481 137571   91  0  1   90   39    60 0.484  -1.51
 3.03 PlyA + 137752 137757    6                               1.05

 4.00 Prom + 144823 144862   40                              -2.16
 4.01 Init + 160527 160589   63  2  0   76   82    72 0.148   6.55
 4.02 Term + 161571 161636   66  2  0   80   41    51 0.069  -2.46
 4.03 PlyA + 163640 163645    6                               1.05

 5.03 PlyA - 164566 164561    6                               1.05
 5.02 Term - 174204 174103  102  0  0   31   48   162 0.487   4.78
 5.01 Init - 180982 180959   24  1  0   69  119     7 0.398   1.50
 5.00 Prom - 181162 181123   40                              -4.46

 6.03 PlyA - 181511 181506    6                               1.05
 6.02 Term - 183054 182916  139  2  1   75   42   166 0.620   8.14
 6.01 Init - 185273 185245   29  2  2   84   73    29 0.599   0.07
 6.00 Prom - 187690 187651   40                              -5.36

 7.07 PlyA - 189200 189195    6                               1.05
 7.06 Term - 189409 189258  152  2  2   80   47    62 0.087  -0.63
 7.05 Intr - 194160 194040  121  0  1  117  119    13 0.104   7.37
 7.04 Intr - 212344 212267   78  1  0  125   31    32 0.315   0.95
 7.03 Intr - 213721 213695   27  1  0  124   79     1 0.464   1.11
 7.02 Intr - 214891 214790  102  1  0   46   72    74 0.368   1.97
 7.01 Init - 216772 216755   18  1  0   46  100    44 0.530   1.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   2301   2230   72  0  0  142   37    34 0.876   1.61
S.002 Init -  89335  89038  298  1  1   65   41   238 0.916  12.20
S.003 Term -  93725  93559  167  0  2  107   48   140 0.977   9.98
S.004 Init -  95420  95357   64  2  1   84   83    39 0.953   4.45
S.005 Sngl - 156433 156290  144  1  0   34   54   169 0.835   2.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_1|182_aa
MPGSVGLGARSRGWGRSGRLGLRGNLGEKGERLGMAEHLGMAGCRSRAVPFREAAEAQRE
FKNCAGRPVVLGDLAHPLQLLAWVLSPSLPGASGMGWPLRVRGLPSLHPPTRNLLWPASA
VRSPGSCQCLSLHTSPQAEGASSSLGQPREGLPQCSGGLKGSSSAARVDTEAKEAQRVSE
GC

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_1|549_bp
atgccagggtcagtgggactgggtgcccggagcagggggtggggccggtcggggaggctg
gggctgcgtgggaacttgggggagaagggggagcgcttgggcatggcagagcacttgggt
atggcgggctgcaggtcccgagccgtgccctttagggaggcggctgaggcccagcgagaa
ttcaagaactgtgcaggtaggccagtagtgctgggagacctggcgcaccctctgcagctg
ctggcctgggtgctaagcccctcattgcctggggccagtggcatgggctggcctctccga
gtgcggggcctaccaagcctgcacccacccacccggaacttgctctggcccgcgagcgct
gtgcgcagccccggttcctgccagtgcctctccctccacacctccccacaagcagaggga
gccagctccagcctcggccagcccagagaggggctcccacagtgcagcggcgggctgaag
ggctcctcaagcgctgccagagtggacaccgaggccaaggaggcacagagagtgagcgag
ggctgctag

>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_2|1222_aa
MRELAAQADAKRLASSITLRKCKFSFTNENDQNGFDNEENVILHTLRSPKFWLATALSID
KEHHQCTANLGPKYTKQTAPECADSRLSSINITDNMYVHQLRLKRKVPTTLKTITGPGLP
KAAQETFSLEIWSFVFYGSQDGHGVELSNITQQPEEPLCSDRTRRRALSTATMGKGVGRD
KYEPAAVSEQGDKKGKKGKKDRDMDELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARA
AEILARDGPNALTPPPTTPEWIKFCRQLFGGFSMLLWIGAILCFLAYSIQAATEEEPQND
NLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVG
DLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTN
CVEGTARGIVVYTGDRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFI
LSLILEYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLG
STSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSRIAGLC
NRAVFQANQENLPILKRAVAGDASESALLKCIELCCGSVKEMRERYAKIVEIPFNSTNKY
QLSIHKNPNTSEPQHLLVMKGAPERILDRCSSILLHGKEQPLDEELKDAFQNAYLELGGL
GERVLGFCHLFLPDEQFPEGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVPDAVGKCRS
AGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS
DLKDMTSEQLDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA
DIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEIT
PFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNER
LISMAYGQIGMIQALGGFFTYFVILAENGFLPIHLLGLRVDWDDRWINDVEDSYGQQWTY
EQRKIVEFTCHTAFFVSIVVVQWADLVICKTRRNSVFQQGMKNKILIFGLFEETALAAFL
SYCPGMGVALRMYPLNSKKPWSSGKPWREQGKRKALNFTPDFPPEHFCPFLCDNPLNRKF
YSQTFDLGRAAPMNTSPPKLPG

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_2|3669_bp
atgagagagctggcagcacaggcagatgctaaaagacttgcctccagtattaccttaaga
aaatgtaaattttcatttacaaatgaaaatgatcaaaatggcttcgacaatgaggaaaat
gtcattttacacacgttaagaagtcccaagttctggttggctacagctctgagtattgac
aaagagcatcatcaatgtactgctaaccttgggccaaaatacaccaagcagacagctcct
gaatgtgctgacagcaggcttagcagcatcaatatcacggataacatgtacgttcatcag
ttgcggctgaaaagaaaagttcccaccaccctgaagaccatcactggccctggacttcct
aaagcagcccaagaaacattttctctggaaatctggtcttttgtcttctacgggagccaa
gatggccatggagtggagctgagcaacatcacccagcagcctgaggagcccctgtgcagc
gacaggacccggcgccgggcactgagcaccgccaccatggggaagggggttggacgtgat
aagtatgagcctgcagctgtttcagaacaaggtgataaaaagggcaaaaagggcaaaaaa
gacagggacatggatgaactgaagaaagaagtttctatggatgatcataaacttagcctt
gatgaacttcatcgtaaatatggaacagacttgagccggggattaacatctgctcgtgca
gctgagatcctggcgcgagatggtcccaacgccctcactccccctcccactactcctgaa
tggatcaagttttgtcggcagctctttggggggttctcaatgttactgtggattggagcg
attctttgtttcttggcttatagcatccaagctgctacagaagaggaacctcaaaacgat
aatctgtacctgggtgtggtgctatcagccgttgtaatcataactggttgcttctcctac
tatcaagaagctaaaagttcaaagatcatggaatccttcaaaaacatggtccctcagcaa
gcccttgtgattcgaaatggtgagaaaatgagcataaatgcggaggaagttgtggttggg
gatctggtggaagtaaaaggaggagaccgaattcctgctgacctcagaatcatatctgca
aatggctgcaaggtggataactcctcgctcactggtgaatcagaaccccagactaggtct
ccagatttcacaaatgaaaaccccctggagacgaggaacattgccttcttttcaaccaat
tgtgttgaaggcaccgcacgtggtattgttgtctacactggggatcgcactgtgatggga
agaattgccacacttgcttctgggctggaaggaggccagacccccattgctgcagaaatt
gaacattttatccacatcatcacgggtgtggctgtgttcctgggtgtgtctttcttcatc
ctttctctcatccttgagtacacctggcttgaggctgtcatcttcctcatcggtatcatc
gtagccaatgtgccggaaggtttgctggccactgtcacggtctgtctgacacttactgcc
aaacgcatggcaaggaaaaactgcttagtgaagaacttagaagctgtggagaccttgggg
tccacgtccaccatctgctctgataaaactggaactctgactcagaaccggatgacagtg
gcccacatgtggtttgacaatcaaatccatgaagctgatacgacagagaatcagagtggt
gtctcttttgacaagacttcagctacctggcttgctctgtccagaattgcaggtctttgt
aacagggcagtgtttcaggctaaccaggaaaacctacctattcttaagcgggcagttgca
ggagatgcctctgagtcagcactcttaaagtgcatagagctgtgctgtggttccgtgaag
gagatgagagaaagatacgccaaaatcgtcgagatacccttcaactccaccaacaagtac
cagttgtctattcataagaaccccaacacatcggagccccaacacctgttggtgatgaag
ggcgccccagaaaggatcctagaccgttgcagctctatcctcctccacggcaaggagcag
cccctggatgaggagctgaaagacgcctttcagaacgcctatttggagctggggggcctc
ggagaacgagtcctaggtttctgccacctctttctgccagatgaacagtttcctgaaggg
ttccagtttgacactgacgatgtgaatttccctatcgataatctgtgctttgttgggctc
atctccatgattgaccctccacgggcggccgttcctgatgccgtgggcaaatgtcgaagt
gctggaattaaggtcatcatggtcacaggagaccatccaatcacagctaaagctattgcc
aaaggtgtgggcatcatctcagaaggcaatgagaccgtggaagacattgctgcccgcctc
aacatcccagtcagccaggtgaaccccagggatgccaaggcctgcgtagtacacggcagt
gatctaaaggacatgacctccgagcagctggatgacattttgaagtaccacactgagata
gtgtttgccaggacctcccctcagcagaagctcatcattgtggaaggctgccaaagacag
ggtgctatcgtggctgtgactggtgacggtgtgaatgactctccagctttgaagaaagca
gacattggggttgctatggggattgctggctcagatgtgtccaagcaagctgctgacatg
attcttctggatgacaactttgcctcaattgtgactggagtagaggaaggtcgtctgatc
tttgataacttgaagaaatccattgcttataccttaaccagtaacattcccgagatcacc
ccgttcctgatatttattattgcaaacattccactaccactggggactgtcaccatcctc
tgcattgacttgggcactgacatggttcctgccatctccctggcttatgagcaggctgag
agtgacatcatgaagagacagcccagaaatcccaaaacagacaaacttgtgaatgagcgg
ctgatcagcatggcctatgggcagattggaatgatccaggccctgggaggcttctttact
tactttgtgattctggctgagaacggcttcctcccaattcacctgttgggcctccgagtg
gactgggatgaccgctggatcaacgatgtggaagacagctacgggcagcagtggacctat
gagcagaggaaaatcgtggagttcacctgccacacagccttcttcgtcagtatcgtggtg
gtgcagtgggccgacttggtcatctgtaagaccaggaggaattcggtcttccagcagggg
atgaagaacaagatcttgatatttggcctctttgaagagacagccctggctgctttcctt
tcctactgccctggaatgggtgttgctcttaggatgtatcccctcaactctaagaagccc
tggtcttctgggaaaccctggagggagcaaggcaaaaggaaggctctgaacttcacacct
gattttccaccagaacatttctgcccttttctgtgtgacaatcctttgaatagaaagttc
tacagccaaacatttgatttaggaagagcagctcccatgaacaccagtccaccaaaattg
cctggttga

>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_3|59_aa
MRRSGGSFRGARATAWGSADSSLRYGGCRGCGRQNNGPEDDLHGIGKSGLQMELRLIIK

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_3|180_bp
atgcgccgctcaggtgggagcttccggggagctcgcgcgacagcctgggggagcgcggat
tcgtctctgcgctacggcggctgcagagggtgtggaagacagaataatggccccgaagac
gacttacatggcatagggaaatcaggattgcagatggaattaaggttgataatcaagtga

>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_4|42_aa
MEPEDATHVDETHLANAQPENTNSTHEKIKPVSKLKAAPLTA

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_4|129_bp
atggagccagaggatgcaactcatgtggatgagacccatttggccaatgcacagccggag
aataccaactcaacacatgagaagattaagccagtatccaagctcaaggctgcaccccta
acagcctga

>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_5|41_aa
MTGTRKKLRVGIPLALPQLHPECRQLKYTSALTELAGDVQL

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_5|126_bp
atgactgggacaagaaagaagctgagggttgggattccactggccctgccccagctgcac
cctgaatgccgtcagctcaagtacaccagcgcgctgacggagctggcaggtgacgtgcag
ctgtga

>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_6|55_aa
MDNINAVIKGLIPIISTLPLSSQPLSIVTVITIIISTTIITVITITTIITTILPS

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_6|168_bp
atggataacatcaatgcagtaattaaaggtcttatccccatcatctcaacactacctcta
tcatcacaaccactgtcaattgtcaccgtcatcaccattatcatcagcactactatcatt
actgtcatcaccatcaccaccatcattaccaccatcttaccatcatga

>gi568815597f:116284013_116503976|GENSCAN_predicted_peptide_7|165_aa
MGKIRKTVAPRNLLLPYLMGLNRRYIPRFTIATFRERLHQIQSYKQRQQDHADSVGPGPG
STSQASEHVNLRTEQVLTSLSCFPLLQYGFDILIITATAKIPLCFINPEENTMSADPGTH
SLDSKFHEDRVHVSFISEVPGPSKGPGTMQMLKKYCWMLNEWMNE

>gi568815597f:116284013_116503976|GENSCAN_predicted_CDS_7|498_bp
atgggaaaaatccggaagaccgtggcaccaaggaacctgctgctaccctacttgatgggg
ctgaacaggagatatattccacgcttcacaattgccacctttcgggagcggcttcaccag
attcagtcatataagcagaggcagcaggaccatgctgattctgtgggaccaggcccgggc
tctaccagccaggcctctgaacatgtcaacttgagaactgaacaggttctcacatcgctt
tcctgtttccctctcctgcaatatggatttgacatattaatcattacagcaactgctaaa
attccactgtgcttcattaatccggaggaaaataccatgtcagctgaccctggcactcac
tcattagattccaagttccatgaggacagggtccatgtctccttcatcagtgaggtccca
gggcctagcaaagggcctggcacgatgcagatgctcaagaaatattgctggatgttgaat
gaatggatgaatgaatga