GENSCAN 1.0	Date run:  3-Nov-116	Time: 13:28:04

Sequence gi568815591f:80035161_80317490 : 282330 bp : 36.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    523    518    6                               1.05
 1.01 Sngl -   9609   9226  384  0  0   53   44   316 0.976  19.64
 1.00 Prom -  13281  13242   40                              -5.45

 2.02 PlyA -  13406  13401    6                               1.05
 2.01 Sngl -  14311  13988  324  1  0   45   31   198 0.764   5.55
 2.00 Prom -  26008  25969   40                              -4.85

 3.03 PlyA -  26264  26259    6                               1.05
 3.02 Term -  31273  31078  196  0  1   49   48   189 0.425   6.90
 3.01 Init -  37011  36932   80  0  2   68   75    72 0.267   4.48
 3.00 Prom -  39841  39802   40                              -3.55

 4.00 Prom +  41142  41181   40                              -3.95
 4.01 Init +  61639  62006  368  0  2   34   47   303 0.076  17.34
 4.02 Term +  70490  70619  130  2  1   52   49   208 0.822   9.97
 4.03 PlyA +  71128  71133    6                               1.05

 5.00 Prom +  71857  71896   40                              -6.35
 5.01 Init +  76136  76218   83  1  2   62   77   127 0.392   9.49
 5.02 Intr +  87732  87801   70  0  1   85   34    41 0.009  -3.33
 5.03 Intr +  99060  99152   93  2  0  111   97    51 0.781   7.54
 5.04 Intr +  99287  99408  122  1  2   20  101   121 0.062   4.97
 5.05 Intr +  99868 100118  251  1  2   51   99   177 0.062  11.26
 5.06 Intr + 126778 126907  130  2  1   63   76    66 0.008   1.73
 5.07 Intr + 148908 149030  123  0  0   51   97    50 0.034   0.98
 5.08 Intr + 153930 154071  142  0  1   81  115    63 0.982   7.73
 5.09 Intr + 164065 164222  158  0  2   56   92   178 0.963  12.89
 5.10 Term + 168544 168676  133  1  1   71   48    37 0.001  -5.42
 5.11 PlyA + 168730 168735    6                               1.05

 6.00 Prom + 172834 172873   40                              -5.05
 6.01 Init + 175810 175942  133  0  1   31   14   237 0.001  10.95
 6.02 Term + 185261 185373  113  0  2   85   52   117 0.483   5.54
 6.03 PlyA + 186088 186093    6                               1.05

 7.00 Prom + 192704 192743   40                              -3.45
 7.01 Sngl + 216707 216991  285  1  0   58   47   256 0.988  13.79
 7.02 PlyA + 217249 217254    6                               1.05

 8.00 Prom + 220338 220377   40                              -2.95
 8.01 Init + 229268 229333   66  1  0   62   68    65 0.079   3.02
 8.02 Term + 252104 252301  198  1  0   69   44   135 0.383   3.62
 8.03 PlyA + 252349 252354    6                               1.05

 9.04 PlyA - 254386 254381    6                               1.05
 9.03 Term - 258353 258040  314  0  2   21   54   274 0.546  11.48
 9.02 Intr - 277255 277187   69  2  0   51  106    41 0.296   0.44
 9.01 Init - 277468 277384   85  1  1   54   61    82 0.484   3.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 264544 264473   72  1  0   34   38   124 0.839  -1.07
S.002 Init - 265480 265397   84  1  0   64   72    84 0.879   5.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_1|127_aa
MNGNALMSRQRCAAGAEPSWGTSVRAVQKGNVRSKPPHRTPTGALPSGAVRRGLPSSRCQ
NGRSTSSLHWAPGKAIGTECQPMKAARKGAVSCKVTGSELLKAMGAHLLHLHDLDVRHEV
KELILEL

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_1|384_bp
atgaatggaaacgcgttgatgtctaggcagaggtgtgctgcaggggcagagccctcatgg
ggaacctctgttagggcagtgcagaagggaaatgtgaggtccaagcccccacacagaacc
cccactggggcactgcctagtggagctgtgagaagagggctaccatcctccagatgccag
aatggtagatctaccagcagtttgcactgggcacctggaaaagctataggaactgaatgc
cagcccatgaaagcagccaggaagggggctgtatcctgcaaagtgacaggatcggagctg
ctgaaggctatgggagcccacctcttacatctacatgacctggatgtaagacatgaagtc
aaagaactcattttggagctttaa

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_2|107_aa
MLPFGLLHPPSCTHINPKPQAPQADEQTSSRAEKQKSGRTVQQRRREEKEHLNIERSLAG
DGQRGDPRDGQTPGEDHLSTVSPFQLPIHPAESHLHLTKKSPTFTII

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_2|324_bp
atgttgccttttggcctgctacaccccccatcctgtacccatataaaccccaaaccccag
gctccacaagcggatgagcagacaagcagcagagcagagaagcagaagagtggcagaaca
gtgcagcagagaaggagagaagagaaggagcatctgaacattgagaggagtttggctggg
gatggtcagagaggagatccaagggatggccaaactccaggagaagatcatctttccact
gtatcccctttccagctccccatccatcctgctgagagccacctccatctcacaaaaaaa
tcccccacatttaccatcatttaa

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_3|91_aa
MIELMTNIQSTLGKFLRPVGRLEMSDVPQNGRSTGSLHPAPGKATGIQLRPVKAALGAES
CKATGAELPKFLEAHPLQQCALNVGNGVKRD

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_3|276_bp
atgattgaactgatgacaaatatccaaagcaccttgggaaaatttttacggcctgtaggc
cgcctagaaatgtctgatgtaccccaaaatggtagatccactggcagcttgcaccctgca
cctggaaaagctacaggcattcaactccgacctgtgaaagcagccctgggggctgaatcc
tgcaaagccacaggggctgagctgcccaagttcttggaagcccaccccttgcagcagtgt
gccctaaatgtgggaaatggagtcaaacgagattaa

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_4|165_aa
MVLVLKLSADKHDDLTNVDPGHSTLGFSKGPSHTHLEPFSPSTGLHLVDADDMDGMELHS
DVKAISAPTFHHVLIGTNTDSLQGFRRQQLIFIRHHVATEWELIHFCLLSTQRYRSQQKR
DFGAYVAEQDKDKEEEEEEEEEEGGKEEGYWNTEIDTHTGEMEGM

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_4|498_bp
atggtccttgttctgaagcttagtgcggataaacatgatgacttgaccaatgtggaccct
ggccacagtaccctggggttttccaaaggcccctcacatacccatctggagcctttcagc
cccagcacagggctacatcttgttgatgcagatgacatggatgggatggagctacactcg
gatgtgaaagccatctctgccccaacttttcaccatgtacttattggcacaaatacggac
agcctccagggcttcagaagacagcagctcatattcatcagacaccatgtggccacagag
tgggaactcatccacttttgccttctttcgacccaaagatacagatctcagcagaaacga
gactttggagcctatgtggcagagcaagacaaagacaaagaagaagaagaggaggaagag
gaagaggaaggtggcaaagaggagggatattggaacacagagatagatacacacacagga
gaaatggaaggaatgtga

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_5|434_aa
MANTTDWTMHEITSQQSAGSTGNTANERDALSTTSEDKKPKDRYPSSPPGKVTRKSFKMR
SCEKRESARKEGGIGRRKEKQKPTGICILKNLAWLPALGMLKRPELAFFGNFGSSPTPTR
RGRKWWGRRGPRREAFERPLGERKDSPVLGARTRARRERRQALAFGTMGCTLSAEDKAAV
ERSKMIDRNLREDGEKAAREVKLLLLGSINTRLFNSYRVSVLWTECVPPKLYVEALTHSV
MAFGGGAFGRRPVGGGGGLLCVPVTSSESDASAATSILTSSEERIRPRGIRIIHEAGYSE
EECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEEGFMTAEL
AGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTG
IVETHFTFKDLHFK

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_5|1305_bp
atggcaaataccacagactggacaatgcacgaaattaccagtcaacagtcagcagggtca
acaggaaatacggcaaatgaaagagatgccttgagtacaacctcagaagacaaaaagcca
aaagacaggtaccccagcagcccccctgggaaagttacgaggaaatccttcaaaatgcgt
tcttgtgaaaaacgtgagagtgcaaggaaagagggagggataggaagaaggaaagagaag
caaaagccgacagggatttgcattttgaaaaaccttgcgtggctgccggcgctgggcatg
ctcaaacgcccagaactggcttttttcggcaactttggcagctctcccacccccacccga
aggggcaggaagtggtgggggcggcgtggcccccgtcgggaggcgttcgaacgcccgcta
ggagagagaaaggattcccctgtgcttggagcccgcactcgggcgcggagggagcggcgg
caggctctcgctttcggcaccatgggctgcacgctgagcgccgaggacaaggcggcggtg
gagcggagtaagatgatcgaccgcaacctccgtgaggacggcgagaaggcggcgcgcgag
gtcaagctgctgctgctcggatctataaataccaggttatttaatagttatcgagtgtct
gtgctgtggactgaatgtgtccctccgaaattgtatgttgaagccctaacccacagtgtg
atggcatttggaggtggggcatttgggaggagaccagtgggcggagggggaggactcctc
tgtgtgcctgttaccagtagcgaatctgatgcatctgcagcaacctcaattcttacctcc
tcagaagaaagaattcggccgaggggcataagaattatccatgaagctggttattcagaa
gaggagtgtaaacaatacaaagcagtggtctacagtaacaccatccagtcaattattgct
atcattagggctatggggaggttgaagatagactttggtgactcagcccgggcggatgat
gcacgccaactctttgtgctagctggagctgctgaagaaggctttatgactgcagaactt
gctggagttataaagagattgtggaaagatagtggtgtacaagcctgtttcaacagatcc
cgagagtaccagcttaatgattctgcagcatactatttgaatgacttggacagaatagct
caaccaaattacatcccgactcaacaagatgttctcagaactagagtgaaaactacagga
attgttgaaacccattttactttcaaagatcttcattttaagtga

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_6|81_aa
MFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMARCPSGNYMILIELPIA
FLTSPSLGLDLTNPSPPALDE

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_6|246_bp
atgtttgatgtgggaggtcagagatctgagcggaagaagtggattcattgcttcgaagga
gtgacggcgatcatcttctgtgtagcactgagtgactacgacctggttctagctgaagat
gaagaaatggcaaggtgcccttctgggaactacatgattctgatagagctgccaatcgca
tttcttacttctccgtctctaggcttagacctgaccaatccgagtcctccagcattggac
gagtga

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_7|94_aa
MTKAILQLIRQKILRDSYKQLYVHKLVNLEEMDKFLEAHNLPGLNQEEIETLNRPISISE
NESVITYEQNEALDQMDLQLNSTRYTKKNRHQSY

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_7|285_bp
atgacaaaggcaatactacaacttatacgacagaagatcctcagagactcctataaacaa
ctctatgtacacaaattagtaaatctggaggaaatggataaattcctggaggcacacaat
ctcccaggattgaatcaggaagagattgaaactctgaataggccaatatcaatttctgaa
aatgaatcagtaataacctacgaacaaaatgaagccctggaccagatggatttacagctg
aattctaccagatatacaaagaaaaaccggcaccaatcctactga

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_8|87_aa
MYIWQLKFFTTLCMPVNDSKCAWLHGMKGESVHFTGGENSDCRTLHWNLVLSCHSGKQQD
KNSAGATEGAFRPTLARGKSSMPADRN

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_8|264_bp
atgtacatctggcaactcaaatttttcaccacactgtgcatgcccgtgaatgacagcaaa
tgtgcttggctgcatggcatgaagggagaatctgtgcatttcacgggtggagagaacagt
gattgtaggactttgcattggaacttagtgctgtcctgtcacagtggaaagcaacaggat
aagaattcagctggtgccacagagggagcatttagaccaactctagccagagggaaatca
tccatgccagcagacagaaattga

>gi568815591f:80035161_80317490|GENSCAN_predicted_peptide_9|155_aa
MPSGNIPKGSEDGGKTGQREKLTHIAVTKGITLSEAHYEMSEAYFRNSLEMGRDWNSLEG
SEEDRKVWESLELPRDLLNGFAQNADSNTDNKVQTEVASDGNEELVGNWSKDESSYVLAK
RLAAFCPCSRDLWNFEVERDDLGFLAEEISKEQSI

>gi568815591f:80035161_80317490|GENSCAN_predicted_CDS_9|468_bp
atgccctcaggaaatatacctaaaggaagtgaagatggaggcaagactggacagagggag
aagctgactcacattgcagttacaaagggcataaccttgagtgaggcacactatgaaatg
tcagaagcctatttccgcaacagcttggagatgggcagggattggaacagtttggagggc
tcagaagaagacagaaaagtgtgggaaagtttggaacttcctagagacttgttgaatggc
tttgcccaaaatgctgatagcaatacggacaataaagtccagactgaggtggcctcagat
ggaaatgaggaacttgttgggaactggagcaaagatgaatcttcttatgttttagcaaag
agactggcagcattttgcccctgctctagagacttgtggaactttgaggttgagagagat
gatttagggtttctggcagaagaaatttctaaggagcaaagcatttga