Result of FASTA (omim) for pF1KB3465
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3465, 345 aa
  1>>>pF1KB3465 345 - 345 aa - 345 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.3991+/-0.000437; mu= -15.0253+/- 0.027
 mean_var=560.7353+/-124.761, 0's: 0 Z-trim(123.4): 950  B-trim: 0 in 0/55
 Lambda= 0.054162
 statistics sampled from 41774 (43207) to 41774 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.507), width:  16
 Scan time:  9.580

The best scores are:                                      opt bits E(85289)
NP_057615 (OMIM: 609392) Krueppel-like factor 3 [H ( 345) 2404 202.0 1.5e-51
XP_016863768 (OMIM: 609392) PREDICTED: Krueppel-li ( 320) 2232 188.6 1.6e-47
XP_016875874 (OMIM: 607531) PREDICTED: Krueppel-li ( 352)  668 66.4 1.1e-10
XP_011533213 (OMIM: 607531) PREDICTED: Krueppel-li ( 383)  668 66.4 1.1e-10
XP_011533214 (OMIM: 607531) PREDICTED: Krueppel-li ( 383)  668 66.4 1.1e-10
XP_016875873 (OMIM: 607531) PREDICTED: Krueppel-li ( 393)  668 66.4 1.2e-10
XP_011533212 (OMIM: 607531) PREDICTED: Krueppel-li ( 400)  668 66.5 1.2e-10
NP_009180 (OMIM: 607531) Krueppel-like factor 12 [ ( 402)  668 66.5 1.2e-10
XP_011533211 (OMIM: 607531) PREDICTED: Krueppel-li ( 402)  668 66.5 1.2e-10
XP_005266308 (OMIM: 607531) PREDICTED: Krueppel-li ( 402)  668 66.5 1.2e-10
XP_011533209 (OMIM: 607531) PREDICTED: Krueppel-li ( 415)  668 66.5 1.2e-10
NP_001311034 (OMIM: 300286) Krueppel-like factor 8 ( 356)  665 66.2 1.3e-10
NP_001311031 (OMIM: 300286) Krueppel-like factor 8 ( 359)  665 66.2 1.3e-10
XP_005262036 (OMIM: 300286) PREDICTED: Krueppel-li ( 359)  665 66.2 1.3e-10
NP_009181 (OMIM: 300286) Krueppel-like factor 8 is ( 359)  665 66.2 1.3e-10
XP_005262034 (OMIM: 300286) PREDICTED: Krueppel-li ( 359)  665 66.2 1.3e-10
NP_001311033 (OMIM: 300286) Krueppel-like factor 8 ( 364)  665 66.2 1.3e-10
XP_016884739 (OMIM: 300286) PREDICTED: Krueppel-li ( 354)  655 65.4 2.2e-10
XP_011529061 (OMIM: 300286) PREDICTED: Krueppel-li ( 354)  655 65.4 2.2e-10
NP_001273747 (OMIM: 602903) Krueppel-like factor 5 ( 366)  624 63.0 1.2e-09
NP_001721 (OMIM: 602903) Krueppel-like factor 5 is ( 457)  624 63.1 1.4e-09
NP_001291 (OMIM: 176807,602053,613659) Krueppel-li ( 283)  576 59.1 1.3e-08
NP_004226 (OMIM: 602253) Krueppel-like factor 4 is ( 479)  582 59.8 1.4e-08
NP_001257872 (OMIM: 604865) Krueppel-like factor 7 ( 269)  558 57.7 3.4e-08
NP_001257873 (OMIM: 604865) Krueppel-like factor 7 ( 274)  558 57.7 3.5e-08
XP_016860650 (OMIM: 604865) PREDICTED: Krueppel-li ( 302)  558 57.7 3.7e-08
NP_003700 (OMIM: 604865) Krueppel-like factor 7 is ( 302)  558 57.7 3.7e-08
XP_011510376 (OMIM: 604865) PREDICTED: Krueppel-li ( 270)  546 56.7 6.6e-08
XP_011510375 (OMIM: 604865) PREDICTED: Krueppel-li ( 272)  546 56.7 6.7e-08
XP_016860651 (OMIM: 604865) PREDICTED: Krueppel-li ( 275)  546 56.7 6.7e-08
XP_011510374 (OMIM: 604865) PREDICTED: Krueppel-li ( 303)  546 56.8 7.2e-08
XP_006712878 (OMIM: 604865) PREDICTED: Krueppel-li ( 303)  546 56.8 7.2e-08
XP_005246983 (OMIM: 604865) PREDICTED: Krueppel-li ( 303)  546 56.8 7.2e-08
NP_001300981 (OMIM: 602253) Krueppel-like factor 4 ( 513)  543 56.8 1.2e-07
NP_057354 (OMIM: 602016) Krueppel-like factor 2 [H ( 355)  529 55.5   2e-07
XP_011525944 (OMIM: 111150,600599,613566,613673) P ( 324)  505 53.6 6.9e-07
NP_006554 (OMIM: 111150,600599,613566,613673) Krue ( 362)  505 53.7 7.4e-07
XP_005247457 (OMIM: 606465) PREDICTED: Krueppel-li ( 416)  473 51.2 4.6e-06
NP_054798 (OMIM: 606465) Krueppel-like factor 15 [ ( 416)  473 51.2 4.6e-06
XP_011511045 (OMIM: 606465) PREDICTED: Krueppel-li ( 435)  473 51.3 4.8e-06
XP_011539002 (OMIM: 609602) PREDICTED: Krueppel-li ( 352)  466 50.6   6e-06
NP_775755 (OMIM: 609602) Krueppel-like factor 17 [ ( 389)  466 50.7 6.4e-06
NP_057079 (OMIM: 605328,612001) Krueppel-like fact ( 288)  457 49.8 8.6e-06
NP_001027453 (OMIM: 601878) Krueppel-like factor 1 ( 469)  460 50.3   1e-05
NP_005646 (OMIM: 601878) Krueppel-like factor 10 i ( 480)  460 50.3   1e-05
NP_001197 (OMIM: 602902) Krueppel-like factor 9 [H ( 244)  440 48.4 1.9e-05
NP_001171187 (OMIM: 603301,610508) Krueppel-like f ( 495)  448 49.4   2e-05
NP_001171189 (OMIM: 603301,610508) Krueppel-like f ( 495)  448 49.4   2e-05
NP_003588 (OMIM: 603301,610508) Krueppel-like fact ( 512)  448 49.4 2.1e-05
NP_000369 (OMIM: 106210,136680,156240,194070,19407 ( 497)  437 48.5 3.7e-05


>>NP_057615 (OMIM: 609392) Krueppel-like factor 3 [Homo   (345 aa)
 initn: 2404 init1: 2404 opt: 2404  Z-score: 1046.3  bits: 202.0 E(85289): 1.5e-51
Smith-Waterman score: 2404; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)

               10        20        30        40        50        60
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
              250       260       270       280       290       300

              310       320       330       340     
pF1KB3 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       :::::::::::::::::::::::::::::::::::::::::::::
NP_057 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
              310       320       330       340     

>>XP_016863768 (OMIM: 609392) PREDICTED: Krueppel-like f  (320 aa)
 initn: 2232 init1: 2232 opt: 2232  Z-score: 974.0  bits: 188.6 E(85289): 1.6e-47
Smith-Waterman score: 2232; 100.0% identity (100.0% similar) in 320 aa overlap (26-345:1-320)

               10        20        30        40        50        60
pF1KB3 MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
                                :::::::::::::::::::::::::::::::::::
XP_016                          MESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQME
                                        10        20        30     

               70        80        90       100       110       120
pF1KB3 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVP
          40        50        60        70        80        90     

              130       140       150       160       170       180
pF1KB3 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSM
         100       110       120       130       140       150     

              190       200       210       220       230       240
pF1KB3 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQ
         160       170       180       190       200       210     

              250       260       270       280       290       300
pF1KB3 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWK
         220       230       240       250       260       270     

              310       320       330       340     
pF1KB3 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       :::::::::::::::::::::::::::::::::::::::::::::
XP_016 FARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
         280       290       300       310       320

>>XP_016875874 (OMIM: 607531) PREDICTED: Krueppel-like f  (352 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 313.0  bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 776; 43.8% identity (65.5% similar) in 336 aa overlap (58-345:28-352)

        30        40        50        60         70        80      
pF1KB3 SMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----
                                     : :::::..:: :.:: ....:: :.    
XP_016    MEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMTASA
                  10        20        30        40        50       

             90       100        110       120       130       140 
pF1KB3 KFPSSHRRASPGLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGI
       . :::   .: . :  .:::  : . :  : .    .. :.  :..:.:    :. .  .
XP_016 SSPSSTSTSSSSSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQF
        60        70        80            90       100          110

              150         160               170       180       190
pF1KB3 LPVIQPVV-VQPVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEK
       : .:.::   .:. .. .  ::...        :.. .  .   : .... ::..:. . 
XP_016 LHIIHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR-
              120       130       140       150       160          

              200          210       220              230       240
pF1KB3 PISQKKIKIEP-GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQ
         .. : ...: :. :.  ..:   ...    ..::.     ::     .:: ::: . .
XP_016 --GHGKAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSR
       170       180       190       200       210       220       

                          250                260       270         
pF1KB3 P-GKR-----------PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKA
         :.:           :. .::         ::. :::::::::..::::::::::::::
XP_016 VRGNRMNNQKFPCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKA
       230       240       250       260        270       280      

     280       290       300       310       320       330         
pF1KB3 HRRTHTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHR
       :::::::::::::::::::::::::::::::.:::::.:::.: ::::::::::::::::
XP_016 HRRTHTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHR
        290       300       310       320       330       340      

     340     
pF1KB3 KRHMLV
       .:::::
XP_016 RRHMLV
        350  

>>XP_011533213 (OMIM: 607531) PREDICTED: Krueppel-like f  (383 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.6  bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:17-383)

                       10        20        30        40        50  
pF1KB3         MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEG
                       ...:  .:   .::.  ::.. :   . . . : ::  ... . 
XP_011 MLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVKGEP-PEDSLSVDH-
               10        20        30           40         50      

             60         70        80            90       100       
pF1KB3 LSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASPGLSMPSSSPP-IKK
            : :::::..:: :.:: ....:: :.    . :::   .: . :  .:::  : .
XP_011 --FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSRLASSPTVITS
            60        70        80        90       100       110   

        110       120       130       140        150         160   
pF1KB3 YSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQPVPFMYT--SHLQQ
        :  : .    .. :.  :..:.:    :. .  .: .:.::   .:. .. .  ::...
XP_011 VSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSSPMNLQSNKLSHVHR
           120           130          140       150       160      

                   170       180       190       200          210  
pF1KB3 --------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP-GIEPQ--RTDYYP
               :.. .  .   : .... ::..:. .   .. : ...: :. :.  ..:   
XP_011 IPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDPRGLSPRQSKSDSDD
        170       180       190       200          210       220   

            220              230       240                   250   
pF1KB3 EEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR-----------PLPVES---
       ...    ..::.     ::     .:: ::: . .  :.:           :. .::   
XP_011 DDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSISPFSIESTRR
           230       240       250       260       270       280   

                    260       270       280       290       300    
pF1KB3 ------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
             ::. :::::::::..:::::::::::::::::::::::::::::::::::::::
XP_011 QRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
           290        300       310       320       330       340  

          310       320       330       340     
pF1KB3 DELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 DELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
            350       360       370       380   

>>XP_011533214 (OMIM: 607531) PREDICTED: Krueppel-like f  (383 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.6  bits: 66.4 E(85289): 1.1e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:17-383)

                       10        20        30        40        50  
pF1KB3         MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEG
                       ...:  .:   .::.  ::.. :   . . . : ::  ... . 
XP_011 MLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVKGEP-PEDSLSVDH-
               10        20        30           40         50      

             60         70        80            90       100       
pF1KB3 LSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASPGLSMPSSSPP-IKK
            : :::::..:: :.:: ....:: :.    . :::   .: . :  .:::  : .
XP_011 --FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSRLASSPTVITS
            60        70        80        90       100       110   

        110       120       130       140        150         160   
pF1KB3 YSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQPVPFMYT--SHLQQ
        :  : .    .. :.  :..:.:    :. .  .: .:.::   .:. .. .  ::...
XP_011 VSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSSPMNLQSNKLSHVHR
           120           130          140       150       160      

                   170       180       190       200          210  
pF1KB3 --------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP-GIEPQ--RTDYYP
               :.. .  .   : .... ::..:. .   .. : ...: :. :.  ..:   
XP_011 IPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDPRGLSPRQSKSDSDD
        170       180       190       200          210       220   

            220              230       240                   250   
pF1KB3 EEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR-----------PLPVES---
       ...    ..::.     ::     .:: ::: . .  :.:           :. .::   
XP_011 DDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSISPFSIESTRR
           230       240       250       260       270       280   

                    260       270       280       290       300    
pF1KB3 ------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
             ::. :::::::::..:::::::::::::::::::::::::::::::::::::::
XP_011 QRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARS
           290        300       310       320       330       340  

          310       320       330       340     
pF1KB3 DELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 DELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
            350       360       370       380   

>>XP_016875873 (OMIM: 607531) PREDICTED: Krueppel-like f  (393 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.5  bits: 66.4 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:27-393)

                                 10        20        30        40  
pF1KB3                   MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPL
                                 ...:  .:   .::.  ::.. :   . . . : 
XP_016 MVNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVKGEP-
               10        20        30        40           50       

             50        60         70        80            90       
pF1KB3 PEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASPGLSM
       ::  ... .      : :::::..:: :.:: ....:: :.    . :::   .: . : 
XP_016 PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSR
         60           70        80        90       100       110   

       100        110       120       130       140        150     
pF1KB3 PSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQPVPF
        .:::  : . :  : .    .. :.  :..:.:    :. .  .: .:.::   .:. .
XP_016 LASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSSPMNL
           120       130           140          150       160      

           160               170       180       190       200     
pF1KB3 MYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP-GIE
       . .  ::...        :.. .  .   : .... ::..:. .   .. : ...: :. 
XP_016 QSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDPRGLS
        170       180       190       200       210          220   

            210       220              230       240               
pF1KB3 PQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR----------
       :.  ..:   ...    ..::.     ::     .:: ::: . .  :.:          
XP_016 PRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSI
           230       240       250       260       270       280   

           250                260       270       280       290    
pF1KB3 -PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTW
        :. .::         ::. :::::::::..:::::::::::::::::::::::::::::
XP_016 SPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTW
           290       300        310       320       330       340  

          300       310       320       330       340     
pF1KB3 EGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_016 EGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
            350       360       370       380       390   

>>XP_011533212 (OMIM: 607531) PREDICTED: Krueppel-like f  (400 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.4  bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:34-400)

                                     10        20        30        
pF1KB3                       MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
                                     ...:  .:   .::.  ::.. :   . . 
XP_011 VQACGTNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
            10        20        30        40          50         60

       40        50        60         70        80            90   
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
       . : ::  ... .      : :::::..:: :.:: ....:: :.    . :::   .: 
XP_011 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
                70           80        90       100       110      

           100        110       120       130       140        150 
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
       . :  .:::  : . :  : .    .. :.  :..:.:    :. .  .: .:.::   .
XP_011 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
        120       130           140       150          160         

               160               170       180       190       200 
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
       :. .. .  ::...        :.. .  .   : .... ::..:. .   .. : ...:
XP_011 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
     170       180       190       200       210          220      

                210       220              230       240           
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
        :. :.  ..:   ...    ..::.     ::     .:: ::: . .  :.:      
XP_011 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
        230       240       250       260       270       280      

               250                260       270       280       290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
            :. .::         ::. :::::::::..:::::::::::::::::::::::::
XP_011 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
        290       300        310       320       330       340     

              300       310       320       330       340     
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
         350       360       370       380       390       400

>>NP_009180 (OMIM: 607531) Krueppel-like factor 12 [Homo  (402 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.3  bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:36-402)

                                     10        20        30        
pF1KB3                       MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
                                     ...:  .:   .::.  ::.. :   . . 
NP_009 KRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
          10        20        30        40        50           60  

       40        50        60         70        80            90   
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
       . : ::  ... .      : :::::..:: :.:: ....:: :.    . :::   .: 
NP_009 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
              70           80        90       100       110        

           100        110       120       130       140        150 
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
       . :  .:::  : . :  : .    .. :.  :..:.:    :. .  .: .:.::   .
NP_009 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
      120       130           140       150          160       170 

               160               170       180       190       200 
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
       :. .. .  ::...        :.. .  .   : .... ::..:. .   .. : ...:
NP_009 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
             180       190       200       210          220        

                210       220              230       240           
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
        :. :.  ..:   ...    ..::.     ::     .:: ::: . .  :.:      
NP_009 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
      230       240       250       260       270       280        

               250                260       270       280       290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
            :. .::         ::. :::::::::..:::::::::::::::::::::::::
NP_009 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
      290       300       310        320       330       340       

              300       310       320       330       340     
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
NP_009 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
       350       360       370       380       390       400  

>>XP_011533211 (OMIM: 607531) PREDICTED: Krueppel-like f  (402 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.3  bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:36-402)

                                     10        20        30        
pF1KB3                       MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
                                     ...:  .:   .::.  ::.. :   . . 
XP_011 KRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
          10        20        30        40        50           60  

       40        50        60         70        80            90   
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
       . : ::  ... .      : :::::..:: :.:: ....:: :.    . :::   .: 
XP_011 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
              70           80        90       100       110        

           100        110       120       130       140        150 
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
       . :  .:::  : . :  : .    .. :.  :..:.:    :. .  .: .:.::   .
XP_011 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
      120       130           140       150          160       170 

               160               170       180       190       200 
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
       :. .. .  ::...        :.. .  .   : .... ::..:. .   .. : ...:
XP_011 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
             180       190       200       210          220        

                210       220              230       240           
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
        :. :.  ..:   ...    ..::.     ::     .:: ::: . .  :.:      
XP_011 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
      230       240       250       260       270       280        

               250                260       270       280       290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
            :. .::         ::. :::::::::..:::::::::::::::::::::::::
XP_011 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
      290       300       310        320       330       340       

              300       310       320       330       340     
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_011 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
       350       360       370       380       390       400  

>>XP_005266308 (OMIM: 607531) PREDICTED: Krueppel-like f  (402 aa)
 initn: 786 init1: 645 opt: 668  Z-score: 312.3  bits: 66.5 E(85289): 1.2e-10
Smith-Waterman score: 779; 40.8% identity (63.6% similar) in 385 aa overlap (9-345:36-402)

                                     10        20        30        
pF1KB3                       MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIY
                                     ...:  .:   .::.  ::.. :   . . 
XP_005 KRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNVHNYPD--MEAV-PLLLNNVK
          10        20        30        40        50           60  

       40        50        60         70        80            90   
pF1KB3 STPLPEKFFQTPEGLSHGIQMEPVDLTVNK-RSSPPSAGNSPSSL----KFPSSHRRASP
       . : ::  ... .      : :::::..:: :.:: ....:: :.    . :::   .: 
XP_005 GEP-PEDSLSVDH---FQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSS
              70           80        90       100       110        

           100        110       120       130       140        150 
pF1KB3 GLSMPSSSPP-IKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVV-VQ
       . :  .:::  : . :  : .    .. :.  :..:.:    :. .  .: .:.::   .
XP_005 SSSRLASSPTVITSVSSASSS----STVLTPGPLVASA---SGVGGQQFLHIIHPVPPSS
      120       130           140       150          160       170 

               160               170       180       190       200 
pF1KB3 PVPFMYT--SHLQQ--------PLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEP
       :. .. .  ::...        :.. .  .   : .... ::..:. .   .. : ...:
XP_005 PMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGR---GHGKAQMDP
             180       190       200       210          220        

                210       220              230       240           
pF1KB3 -GIEPQ--RTDYYPEEMSPPLMNSVSPP--QAL-----LQENHPSVIVQP-GKR------
        :. :.  ..:   ...    ..::.     ::     .:: ::: . .  :.:      
XP_005 RGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKF
      230       240       250       260       270       280        

               250                260       270       280       290
pF1KB3 -----PLPVES---------PDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPY
            :. .::         ::. :::::::::..:::::::::::::::::::::::::
XP_005 PCSISPFSIESTRRQRRSESPDS-RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY
      290       300       310        320       330       340       

              300       310       320       330       340     
pF1KB3 KCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
       ::::::::::::::::::::.:::::.:::.: ::::::::::::::::.:::::
XP_005 KCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV
       350       360       370       380       390       400  




345 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 13:19:21 2016 done: Thu Nov  3 13:19:23 2016
 Total Scan time:  9.580 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com