GENSCAN 1.0	Date run:  3-Nov-116	Time: 13:01:14

Sequence gi568815589f:90743899_90995597 : 251699 bp : 44.38% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -   1095   1090    6                              -0.45
 1.10 Term -   1537   1482   56  2  2  117   55    20 0.064  -0.68
 1.09 Intr -   7607   7325  283  2  1   74   86   163 0.198  11.69
 1.08 Intr -   8170   7974  197  2  2   58  -42   182 0.149   1.33
 1.07 Intr -  10532  10437   96  0  0  114   75    40 0.570   5.28
 1.06 Intr -  12526  12263  264  2  0   62  100   107 0.124   6.78
 1.05 Intr -  15352  15056  297  2  0   72  -54   251 0.024   6.15
 1.04 Intr -  15861  15760  102  1  0  -11   94   102 0.617   1.05
 1.03 Intr -  18434  18356   79  2  1   84   -9    81 0.042  -2.88
 1.02 Intr -  24982  24760  223  0  1   93  108    52 0.019   5.83
 1.01 Init -  31862  31834   29  2  2   65  101    32 0.011   1.29
 1.00 Prom -  46179  46140   40                              -2.96

 2.00 Prom +  54574  54613   40                              -2.16
 2.01 Init +  57622  57995  374  0  2   58   96   167 0.639   8.95
 2.02 Intr +  63556  63637   82  1  1   51   84    51 0.135   0.64
 2.03 Term +  76579  76704  126  0  0   97   44    72 0.182   1.98
 2.04 PlyA +  76977  76982    6                               1.05

 3.00 Prom +  82559  82598   40                              -1.96
 3.01 Init + 100001 100417  417  1  0   82   80   705 0.820  65.53
 3.02 Term + 101536 101700  165  0  0   79   48   180 0.972  11.02
 3.03 PlyA + 102759 102764    6                              -0.45

 4.00 Prom + 103221 103260   40                              -1.26
 4.01 Init + 104994 105143  150  2  0   81   70    77 0.950   5.24
 4.02 Term + 107428 107619  192  0  0  113   47    68 0.848   2.62
 4.03 PlyA + 108028 108033    6                               1.05

 5.00 Prom + 109501 109540   40                              -2.46
 5.01 Init + 117818 117909   92  1  2   63  113    24 0.813   2.37
 5.02 Intr + 118308 118446  139  0  1  108   80   290 0.999  30.67
 5.03 Intr + 120691 120769   79  0  1  119   96    20 0.880   5.02
 5.04 Intr + 129007 129180  174  2  0   46   63    75 0.393   0.71
 5.05 Intr + 130322 130393   72  0  0   43  100    62 0.430   2.28
 5.06 Intr + 130774 130951  178  2  1   81  106   386 0.987  38.68
 5.07 Intr + 133673 133882  210  2  0   75   72   333 0.990  28.43
 5.08 Intr + 134866 135055  190  1  1   31  115   203 0.994  16.89
 5.09 Intr + 143851 143991  141  0  0   90   46   129 0.719   9.45
 5.10 Intr + 148884 149032  149  2  2   26   77    46 0.136  -3.67
 5.11 Intr + 157479 157545   67  0  1  151   70    12 0.128   4.61
 5.12 Intr + 159408 159614  207  2  0   84   89    26 0.319   1.57
 5.13 Intr + 159850 160189  340  0  1   94   92   237 0.872  19.75
 5.14 Intr + 160436 160968  533  0  2    3   46   384 0.129  18.35
 5.15 Intr + 165404 165425   22  1  1   94  109    22 0.130   2.02
 5.16 Intr + 169845 170010  166  1  1   77   55    98 0.042   4.42
 5.17 Intr + 172050 172068   19  0  1   80  105     4 0.144  -2.09
 5.18 Intr + 172498 172536   39  0  0   68   94    58 0.174   2.82
 5.19 Term + 174290 174361   72  1  0   71   45   102 0.173   2.11
 5.20 PlyA + 177807 177812    6                               1.05

 6.00 Prom + 181473 181512   40                              -3.36
 6.01 Init + 193294 193429  136  0  1   28  105   177 0.528  13.71
 6.02 Intr + 193556 193717  162  0  0   36   52   159 0.694   7.05
 6.03 Term + 194436 194548  113  1  2   54   43    81 0.588  -1.08
 6.04 PlyA + 200289 200294    6                               1.05

 7.03 PlyA - 202792 202787    6                               1.05
 7.02 Term - 213526 213257  270  1  0   69   54   209 0.573  11.08
 7.01 Init - 235406 235290  117  2  0   94   77    59 0.687   5.61
 7.00 Prom - 245124 245085   40                              -3.06

 8.02 PlyA - 246015 246010    6                               1.05
 8.01 Sngl - 250376 250041  336  2  0   71   44   216 0.833  11.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  15352  15048  305  2  2   72   44   258 0.907  15.13
S.002 Init -  97121  97033   89  2  2   62   64    87 0.851   3.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_1|541_aa
MVTASYIAEMVTHPKKVSQDQCLECPDESPKLTGPWVRINVPTMNKRAVDNETVLTVPTD
REKKLSINSRANLLPLAPMSCFAQHTRNNITEEVYTPCDIGSNIIRFFRGYYTRINITGW
VYTYCDIERNIMLSPSLDIRSNITARLRPKTGIQMPLREQRYTGIDEDGHVVERRVFGYQ
PFTCVDLLNWKTNTPPYTKKPQALIDLLQTVIQTHNHTWADWHLLLMFLFNSEERRRVPK
QQLKSPVQPDCVEVLDSVDSSTPDLRDQPCTSVDWELYVDGSSFFNPQGERDAGYAVVTL
DTVVEARLLPQATSAQKAELIAFTRALELSEDIRKNVTGDVNSLAILGVISSSLPLHIGN
NITVLRNLLVILAVSSDSHLHTPMYFFLSNPCWADIGFTSATVPKMTVDMQSHIRVISYA
SCLTRMSFLDFIVRWEYKAFSTCGSHLAVVCLFYGTGIGMYLTSAVAPPPRNGVVASVMY
AVVTPMLNPFIYSLRNRDIQSALWRLRSRTVESHDLFHPFSCVALDFLKGVINSGFGFHS
Y

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_1|1626_bp
atggttacagcatcctacattgcagaaatggttacccatcccaagaaagtgtcacaagat
cagtgtctggaatgcccagatgagagccccaaactgactggcccctgggtcagaatcaat
gtgcctactatgaacaaaagggctgttgacaatgagactgtcctaactgtccctactgac
agagagaaaaaactctccatcaattctagagctaaccttcttccactagccccaatgagc
tgctttgctcaacatactaggaacaatatcacagaagaggtgtacactccctgcgatatt
gggagtaatatcatacgcttcttccgtggatattatactcggatcaatatcactggctgg
gtgtacacctactgcgatattgaacgtaatatcatgctctctccctccctggacattagg
agcaatatcacagctcgtttacgacccaaaacggggatacaaatgcccctgagagagcag
cggtatactgggatagatgaggatggtcacgtggtggagaggcgtgtttttgggtaccag
cccttcacctgcgtcgaccttctcaactggaaaaccaatacaccgccctataccaaaaag
ccacaagccctaattgatttgctccaaactgttatccagacccacaaccacacctgggct
gattggcacctgttgctcatgttcctctttaacagcgaagaaaggcggagagtccccaag
cagcaactaaagagccctgtccagcctgattgtgtagaagtgttggactcagttgactct
agcacacctgacctccgggaccagccttgcacatcagtagactgggaactatatgtggat
gggagcagcttcttcaacccccaaggagagagagatgcagggtatgcagtggtaaccctg
gacactgttgttgaagccagattgttgccccaggccacttcagcccagaaagcggaactc
attgctttcactcgggccttagaactcagtgaagatattaggaaaaatgtcactggggat
gtgaacagccttgcaatattgggagtaatatcatcctctctccccttgcatattgggaac
aacatcacagtgctgaggaacctgctcgtcatcctggctgtcagctctgactcccacctc
cacacccccatgtacttcttcctctccaacccgtgctgggctgacatcggtttcacttcg
gccacggttcccaagatgactgtggacatgcagtcacatatcagagtcatctcttatgcg
agctgcctgacacggatgtctttcttggatttcatcgtcagatgggagtataaagccttc
tccacctgtggctctcacctggcagttgtttgcttattttatggaacaggcattggcatg
tacctgacttcagctgtggcaccaccccccaggaatggtgtggtggcgtcagtgatgtac
gctgtggtcacccccatgctgaaccctttcatctacagcctgagaaacagggacattcaa
agcgccctgtggaggctgcgcagcagaacagtcgaatctcatgatctgttccatcctttt
tcttgtgtggctctcgacttcctcaaaggagtcataaattcggggtttggcttccattcc
tattga

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_2|193_aa
MRSMSRAAPPSLPAKGPCPAGGERRAPPGLLYTCRRLGRFRGPRPALQPIPAQLRAHGRG
QQGGPGRRGATLGGSAGRLPGRVKEVAQNEEEPRARRLRPPRRRLESEEERVAPRCARPR
LTWRSSSFVNGAVTGGFTLIPNGDRACSARYLAQHHVEAAKAWGFHPLKPQPELYGGPFQ
PQLEQLGHRAPSP

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_2|582_bp
atgcggtccatgtcccgggcagccccaccttctctgcctgcgaagggcccttgtccggcg
ggaggagagaggcgcgccccacccgggctcctctacacctgccgccgcctgggccgattc
cgcgggcctcgcccggcgcttcagccgattcccgcccagctccgggctcatgggcgcggt
cagcagggcgggccagggcggcggggcgcgacactgggaggaagtgcgggccgcctgccc
gggcgcgttaaggaagttgcccaaaatgaggaagagccgcgggcccggcggctgaggcca
ccccggcggcggctggagagcgaggaggagcgggtggccccgcgctgcgcccgccctcgc
ctcacctggcgcagctcttcttttgtaaatggagcagtcacagggggcttcactctgata
cctaatggagaccgtgcctgcagtgctcggtacctggctcaacaccacgtggaagctgcc
aaagcttggggctttcaccctctgaagccacagcctgagctctacggtggcccctttcag
ccacagctggagcagctgggacacagggcaccaagtccctag

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_3|193_aa
MASSGMADSANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRK
AHHYTIERELNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPF
EDLKENLIREYVKQTWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQ
IVLIGSKTNGKFL

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_3|582_bp
atggccagcagcggcatggctgacagcgccaaccacctgcccttctttttcggcaacatc
acccgggaggaggcagaagattacctggtccaggggggcatgagtgatgggctttatttg
ctgcgccagagccgcaactacctgggtggcttcgccctgtccgtggcccacgggaggaag
gcacaccactacaccatcgagcgggagctgaatggcacctacgccatcgccggtggcagg
acccatgccagccccgccgacctctgccactaccactcccaggagtctgatggcctggtc
tgcctcctcaagaagcccttcaaccggccccaaggggtgcagcccaagactgggcccttt
gaggatttgaaggaaaacctcatcagggaatatgtgaagcagacatggaacctgcagggt
caggctctggagcaggccatcatcagtcagaagcctcagctggagaagctgatcgctacc
acagcccatgaaaaaatgccttggttccatggaaaaatctctcgggaagaatctgagcaa
attgtcctgataggatcaaagacaaatggaaagttcctgtga

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_4|113_aa
MDLAVREAIEKRPEGSEEPSPPREWQIRMPCGRSVPGEQGTHRGQCHWQRSLPTPFRSDF
EKVVTGPLHMCLKNNEYKQRLFVEGLGSVGQWLSLTAACGISGGDVHHLAFAI

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_4|342_bp
atggaccttgctgtgagggaggccattgagaagaggcctgaaggcagcgaggaaccatcc
ccacccagggaatggcaaattcgaatgccctgtggcaggagcgtgcctggggagcagggc
acccacagaggccagtgtcactggcagagaagcttacccacaccattcaggagtgacttt
gagaaggtagttacagggcctttgcacatgtgcttgaagaataacgaatataaacagagg
ctctttgtggaggggctgggcagtgtgggtcagtggttgtccctcacagccgcctgtggc
atttctggaggtgatgttcatcacctggcctttgctatataa

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_5|962_aa
MPTKHPHPHSKLGGRAVHLGSNPNAGPGEERIRARDNNGSYALCLLHEGKVLHYRIDKDK
TGKLSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVPCQKIGTQVTSVNQFSRSAEILCDK
TDPIDIIFTNKTRCPLALSTGLGHGEQCLPLKCSADRVKEEGNRQESTVSFNPYEPELAP
WAADKGPQREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGY
YQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVME
MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAK
ISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG
QKPYRSQPSSGGLCRMEKFPGLSRFSESQGGSRCGSNSCLKINKPKIKHEFPGPWAYRFN
LSSKEKEETMTALWYRKPCCRALNFPSIRPGNEALKPVPLQPDYPSLTFVSPSANQAPLK
PQGPLKPVPQLPLQPGPQAPEGPAQQHKISHSPLTLLSRRLTPRLLKIYSLRIRSLSPRI
RLLRQIISPHNCLLLWHSQFQVYIQAAVQPDPIHPGQVWLRPATWESFSFKFLKDFKASV
KQYGTNSPFVHSTLKALAEDAWDNIQNDGKICPSFTAVTQGQQEPYPDFIAHLQDATEKT
IPDSHGQRLVVELKAYEQTNADCQVAIRPIKGKIPPGGDILFYIKACEGVGELYIQQWSW
HKPWPLLECLDDSLANAFNAANQGIVEKIVLGFQAAILFNANNKTLYSNKSCPPVCAHDA
VREITGLLSAAQNLTLMPLESEYTDSMGFSGTGPMKLPTWRHGAVLGPGEARRAMLGSET
ALLSAEKPGGPCENNTRRPTREAKPKLTDKAAYGQHQTEFCHDVDITGDAGAEVRATVVK
GE

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_5|2889_bp
atgcccaccaaacacccccacccacactccaagctaggtggtagagctgtccatcttgga
tctaacccaaatgcaggccctggtgaagaaaggatccgagccagagacaacaacggctcc
tacgccctgtgcctgctgcacgaagggaaggtgctgcactatcgcatcgacaaagacaag
acagggaagctctccatccccgagggaaagaagttcgacacgctctggcagctagtcgag
cattattcttataaagcagatggtttgttaagagttcttactgtcccatgtcaaaaaatc
ggcacacaggttacttctgttaatcagttcagtagaagtgctgagatactctgtgacaaa
acagatcccatcgacatcatttttacaaataagaccagatgtcctttagccttgtcaaca
ggcttgggccatggtgaacaatgtctgcctctgaagtgctcagcagaccgtgtgaaagaa
gaagggaaccggcaagagagtactgtgtcattcaatccgtatgagccagaacttgcaccc
tgggctgcagacaaaggcccccagagagaagccctacccatggacacagaggtgtacgag
agcccctacgcggaccccgaggagatcaggcccaaggaggtttacctggaccgaaagctg
ctgacgctggaagacaaagaactgggctctggtaattttggaactgtgaaaaagggctac
taccaaatgaaaaaagttgtgaaaaccgtggctgtgaaaatactgaaaaacgaggccaat
gaccccgctcttaaagatgagttattagcagaagcaaatgtcatgcagcagctggacaac
ccgtacatcgtgcggatgatcgggatatgcgaggccgagtcctggatgctggttatggag
atggcagaacttggtcccctcaataagtatttgcagcagaacagacatgtcaaggataag
aacatcatagaactggttcatcaggtttccatgggcatgaagtacttggaggagagcaat
tttgtgcacagagatctggctgcaagaaatgtgttgctagttacccaacattacgccaag
atcagtgatttcggactttccaaagcactgcgtgctgatgaaaactactacaaggcccag
acccatggaaagtggcctgtcaagtggtacgctccggaatgcatcaactactacaagttc
tccagcaaaagcgatgtctggagctttggagtgttgatgtgggaagcattctcctatggg
cagaagccatatcgatcccagccctccagtgggggcctctgccgaatggagaaatttcct
gggctctccaggttctctgagagtcagggaggctctagatgcggctcaaattcctgttta
aagatcaacaagcccaagataaaacatgaattcccaggaccttgggcatatagattcaat
ctttcctccaaagaaaaagaagaaacgatgacagcactttggtatagaaagccctgctgc
agggccctcaactttccatctattcggcctggcaatgaggccctcaaacctgtccctctg
cagcctgattatccatctctcacttttgtttctccttcagcaaatcaggctcccttgaag
cctcagggtcccttgaagcctgtcccgcagttaccactgcagcctggacctcaggcccct
gaaggacctgcccagcagcacaaaatcagccacagcccgctgaccctgctcagcaggagg
ctgaccccgcggctcctcaagatctacagcctgagaatcaggtccctcagcccgagaatc
aggctcctcaggcaaataatcagcccccacaactgcctgctgctgtggcacagccagttc
caggtatacatccaggcagcagtccaaccagatcctattcatccaggccaggtttggcta
cgccctgctacttgggaaagtttttcttttaaattcctcaaagatttcaaagcatcagtg
aagcagtacggcaccaactccccgtttgttcattccacattaaaggccctagcagaagat
gcttgggataacattcagaatgatggtaaaatatgtccatcttttacggctgttacacag
ggacagcaggaaccctatccagactttattgcccatcttcaagatgcgacagagaaaacc
atccctgatagccacggccaacgacttgttgtagaacttaaggcttatgaacaaacaaat
gcagactgccaagtggctattcgccccattaaaggcaaaattccaccaggaggtgatata
ctcttctacattaaagcctgtgaaggcgtgggggaactctacatacagcaatggtcctgg
cacaagccatggccactattagaatgcctggacgattctctggcaaatgctttcaatgcg
gccaatcagggcattgtagaaaaaattgtcctcggctttcaggctgccattcttttcaat
gccaacaacaaaaccctatacagcaacaaatcttgccctccagtctgtgcccacgatgcc
gtaagggaaatcactgggctgctcagtgccgcgcaaaatttgacattgatgcctttggag
agtgagtacacagactccatgggcttttcagggacaggacccatgaagctgcccacatgg
aggcatggagctgtgctgggacccggggaggccaggagggcaatgctgggctctgagact
gccctgctgtctgctgaaaaacctggtggtccctgtgaaaacaacacccgacgcccaaca
cgtgaagcaaagccaaagctaactgacaaggcggcctatggacagcaccaaacagagttt
tgtcatgatgtagacatcactggagacgctggagctgaagttcgggccacggttgtcaaa
ggagagtag

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_6|136_aa
MWKVSLESPVGKVDLVSPVGEVDLVSPVGEVDLVSPVGKVDLDGEVGKVDLDGEGEPGVT
GGEGGPGVTGQEDEPGFSGGEDEPGASGAECEPGVTSGGDPLARGYFCWGVAWFFGMNYP
SIAQGSGPTSQHLRTR

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_6|411_bp
atgtggaaggtgagcctggagtcaccagtggggaaggtggacctggtgtctccagtgggg
gaggtagacctggtgtctccagtgggggaggtggacctggtgtctccagtggggaaggtg
gacctggatggggaagtggggaaggtggacctggatggggaaggtgagcctggagtcact
ggtggggaaggtggacctggtgtcaccggtcaggaagatgagcctggtttctctggtggg
gaagatgaacctggtgcctctggtgcggaatgtgaacctggagtcaccagtgggggagac
cctcttgcccgtggctacttctgctggggtgttgcctggttctttggcatgaattacccc
agtattgctcagggtagtgggcccacatcacagcatctgagaactcgctag

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_7|128_aa
MPSTGFDTVPSTLPTTAILVGDGGENVVEVWSRENRKWMTMEMMLDKKPIRVIFFFEFKM
DHKAAETTCNVNNAFGSGTTNECTVQWWFKKFCKGDENLEAEEHSGRPLAVDKGQLRATI
KADPPTAT

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_7|387_bp
atgcccagcactggatttgacactgtgccatcaacattacctaccacagcaatcttagtg
ggtgatggaggtgagaacgtggtggaagtctggtcgagagaaaacaggaaatggatgact
atggaaatgatgttagacaaaaagccaattcgagtgattttcttttttgagttcaaaatg
gatcataaagcagcagagacaacttgcaacgtcaacaatgcatttggctcaggaactact
aatgaatgtacagtgcagtggtggttcaaaaagttttgcaaaggagacgagaaccttgaa
gctgaggagcatagtggccggccattggcagttgacaagggccagttgagagcaaccatc
aaagctgatcctcctacagctacatga

>gi568815589f:90743899_90995597|GENSCAN_predicted_peptide_8|111_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTVKETIIRVLRQPTEWEKIFAIYSSDKGL
ISRIYKELKQIDKKKTNNPIKKWAKDIHRHFSKEDIYAANKHDKKLIIAGH

>gi568815589f:90743899_90995597|GENSCAN_predicted_CDS_8|336_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagtaaaagaaactatcatcagagtg
ctcaggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaattgacaagaaaaaaacaaacaaccccatc
aaaaagtgggcaaaggatatacacagacacttctccaaagaagacatttatgcggccaac
aaacatgacaaaaagctcatcatcgctggtcattag