GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:46:13

Sequence gi568815581f:68415400_68630446 : 215047 bp : 43.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1570   1609   40  0  1  124   93   -13 0.146   0.60
 1.02 Term +   4790   5064  275  0  2   90   42   227 0.996  13.93
 1.03 PlyA +   5382   5387    6                               1.05

 2.10 PlyA -   5901   5896    6                               1.05
 2.09 Term -  10776  10655  122  1  2  115   36   136 0.822   9.74
 2.08 Intr -  11790  11736   55  0  1   59   94    28 0.517  -0.95
 2.07 Intr -  13537  13430  108  1  0   86   72    35 0.661   2.18
 2.06 Intr -  14761  14597  165  1  0   50   73    97 0.775   4.56
 2.05 Intr -  18176  18065  112  1  1  119   17    92 0.451   5.58
 2.04 Intr -  19227  19157   71  0  2  108   66   107 0.904   8.48
 2.03 Intr -  20313  20221   93  0  0   70   87    94 0.991   7.66
 2.02 Intr -  21080  20983   98  0  2  116  119    42 0.987   9.83
 2.01 Init -  27623  27614   10  2  1   48  100     5 0.552  -1.52
 2.00 Prom -  28095  28056   40                              -0.36

 3.05 PlyA -  29411  29406    6                               1.05
 3.04 Term -  33083  32985   99  2  0   54   53   106 0.901   1.83
 3.03 Intr -  35498  35329  170  0  2  115  108   180 0.999  22.37
 3.02 Intr -  37593  37511   83  2  2   90   92    64 0.991   6.28
 3.01 Init -  42022  41943   80  1  2   74   87    78 0.947   5.49
 3.00 Prom -  43556  43517   40                              -5.06

 4.00 Prom +  45475  45514   40                              -7.36
 4.01 Init +  46372  46421   50  0  2   52   37    76 0.610  -0.68
 4.02 Intr +  47172  47222   51  0  0   72   91    45 0.627   1.22
 4.03 Intr +  48614  48717  104  2  2   88   67   102 0.911   7.92
 4.04 Term +  50762  50847   86  0  2   94   44    41 0.266  -1.88
 4.05 PlyA +  52777  52782    6                               1.05

 5.00 Prom +  64527  64566   40                              -1.36
 5.01 Init +  76444  76518   75  0  0   62  115    44 0.701   5.59
 5.02 Intr +  97310  97579  270  1  0   90   25    93 0.004   0.94
 5.03 Intr +  99995 100177  183  1  0   77   93   147 0.009  14.08
 5.04 Intr + 107357 107527  171  1  0   63   63   153 0.284  10.44
 5.05 Intr + 108326 108417   92  1  2   51   97    86 0.965   4.59
 5.06 Intr + 108617 108678   62  2  2  110  116    36 0.999   6.98
 5.07 Intr + 109513 109559   47  2  2  108   58    78 0.998   4.93
 5.08 Intr + 110355 110513  159  2  0   71   95    74 0.988   6.58
 5.09 Intr + 112441 112501   61  0  1   74   95    36 0.983   1.21
 5.10 Intr + 113471 113592  122  0  2   75   88   147 0.995  13.61
 5.11 Intr + 114521 114602   82  1  1   49   76    54 0.995  -0.49
 5.12 Term + 114878 115050  173  0  2   99   44   150 0.985   9.69
 5.13 PlyA + 115243 115248    6                               1.05

 6.12 PlyA - 115678 115673    6                               1.05
 6.11 Term - 122342 122078  265  1  1   86   49   145 0.875   5.38
 6.10 Intr - 123997 123938   60  0  0  111  103    11 0.870   2.75
 6.09 Intr - 124567 124486   82  2  1  110   84   134 0.999  13.90
 6.08 Intr - 125559 125450  110  2  2  116   82   258 0.999  27.93
 6.07 Intr - 126766 126586  181  2  1  109   64   200 0.999  18.63
 6.06 Intr - 127410 127295  116  2  2   70   80    76 0.989   5.09
 6.05 Intr - 128322 128230   93  2  0   88   91   115 0.999  10.88
 6.04 Intr - 136552 136474   79  2  1   89  107    91 0.999   9.71
 6.03 Intr - 139428 139378   51  1  0  110   89    31 0.950   4.28
 6.02 Intr - 140344 140160  185  0  2   92   95   131 0.681  13.63
 6.01 Init - 185267 184864  404  2  2   91   94   673 0.268  62.30
 6.00 Prom - 203259 203220   40                              -1.46


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100177  177  1  0   99   93   132 0.823  14.06
S.002 Term + 165424 165566  143  2  2   94   42    87 0.843   2.79
S.003 Init + 173844 173904   61  2  1   81   80    60 0.862   5.91
S.004 Init - 204209 204109  101  2  2   97   80    69 0.878   6.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:68415400_68630446|GENSCAN_predicted_peptide_1|104_aa
VNQGFFSWFGSIAGGARACDGSTGPELQHKFPLIFNLEDDTAEAVPLERGGAEYQAVLPE
VRKVLADVLQDIANDNISSADYTQDPSVTPCCNPYQIACRCQAA

>gi568815581f:68415400_68630446|GENSCAN_predicted_CDS_1|315_bp
gttaatcagggatttttttcttggtttggatccattgctggtggagccagggcgtgtgat
gggagcacggggcctgagctgcagcataagtttcctctgattttcaacctggaagacgat
accgcagaagctgtgcccctagaaagaggtggtgcggagtaccaggctgtgctgcccgag
gtcagaaaggttcttgcagacgtcctccaagacattgccaacgacaacatctccagcgca
gattacactcaggacccttcagtaactccctgctgtaatccctaccaaattgcctgccgc
tgtcaagccgcataa

>gi568815581f:68415400_68630446|GENSCAN_predicted_peptide_2|277_aa
MEDGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLKTVCTIAAHEGTLAAITFNASGSK
LASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFK
LEQVTNRQSTRRAFDLEWLHGKDVYGCYQLPPYPGVRHDASGQGFCHCTLELLRTEEHLY
PLNDPEVATAASCVIQWTPLYVQFGSSGWRRVCLNQNPQSYAATVARPSASSASTVPGYS
EDGGALRGEVIPEHEFATGPVCLDDENEFPPVSIRNP

>gi568815581f:68415400_68630446|GENSCAN_predicted_CDS_2|834_bp
atggaagacggtctatgtgctctctctatcaaccattccaattcttacctggcctatcct
ggaagcctgacttcaggggagattgtgctttatgatggaaactccctgaaaacagtctgc
actattgctgcccatgagggaacactagctgccatcaccttcaatgcctcaggctccaaa
ctagcaagtgcgtctgaaaaaggcacagtcatccgggtgttctctgtccctgatgggcaa
aagctctatgagttccggagagggatgaaaaggtatgtgacaatcagctctctagtgttc
agtatggattcacaattcctctgcgcctccagtaacaccgagacggtacacatcttcaag
ctggaacaggtcaccaacaggcaatcgaccagaagagccttcgacctggagtggctacat
gggaaagatgtttatggctgctaccaactacctccctacccaggtgtcagacatgatgca
tcaggacagggcttttgccactgcacgcttgaacttctccggacagaggaacatctgtac
cctctcaacgatccagaagttgccacggctgctagttgcgtcatccagtggacaccttta
tatgtacaatttggatcctcaggatggaggagagtgtgtcttaatcaaaacccacagtct
tatgcagcgaccgtagccagaccaagtgcatcttcagcctccacggtgccaggttattct
gaggacggcggggcgctgcgaggagaagttattcctgaacatgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagtttcctcctgtgagcattaggaacccgtaa

>gi568815581f:68415400_68630446|GENSCAN_predicted_peptide_3|143_aa
MEAEAADAPPGGVESALSCFSFNQDCTSLATGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQNTDAPGTVS
NSWQSHEPRSNSSRNQDLTSEPR

>gi568815581f:68415400_68630446|GENSCAN_predicted_CDS_3|432_bp
atggaggccgaggccgcggacgctcccccgggcggggttgagtcggcgctcagctgcttc
tctttcaaccaggactgcacatccctagcaactggaactaaagccgggtataagctgttt
tctctgagttctgtggagcagctggatcaagtccacggaagcaatgaaatcccggacgtc
tacatcgtggagcgcctcttctccagcagcctggtggtggtagtcagtcacacaaaacca
cggcagatgaacgtgtatcacttcaagaaaggcacagagatctgtaattacagctactcc
agcaacatcttgtccataaggctgaaccggcaaaacactgatgcaccaggaactgtcagc
aattcatggcaaagccacgaaccaagatctaacagttctcggaaccaagatctaacgtcg
gaaccaagatga

>gi568815581f:68415400_68630446|GENSCAN_predicted_peptide_4|96_aa
MCQYVEEAQGVSPMVPGNVYPHQAAAYAKVETVENTHYFMWEPEKMEISSDEQTGMFPTV
INKASTRPEHTAPSKAFPINYWESPEMPRTCGDLPF

>gi568815581f:68415400_68630446|GENSCAN_predicted_CDS_4|291_bp
atgtgtcagtacgtggaggaagctcaaggagtcagccctatggtgccagggaatgtttat
ccccatcaggcagctgcatatgccaaagtggagactgtcgagaacacccactacttcatg
tgggaacctgagaaaatggaaatcagctcagatgagcagactggaatgttcccaacagtc
ataaacaaggccagcacaaggccagaacatacagctccctccaaagcctttcctattaat
tactgggagtccccggaaatgcctcgcacgtgcggggacctgcccttttag

>gi568815581f:68415400_68630446|GENSCAN_predicted_peptide_5|498_aa
MEVDKLLQKPPENLVLWHNRNKKHMASRPRLRVCILKAVWALALVRGSPAAPLALAAPTP
RLLGPWALRGPPRPPSPPRAAASSLTLPHFLKDNGSILLGSAIVSSAGPGSSCKPRTMES
GSTAASEEARSLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFERLEKEEAK
QIQNLQKAGTRTDSREDEISPPPPNPVVKGRRRRGAISAEVYTEEDAASYVRKVIPKDYK
TMAALAKAIEKNVLFSHLDDNERSDIFDAMFSVSFIAGETVIQQGDEGDNFYVIDQGETD
VYVNNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKR
KMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVL
QRRSENEEFVEVGRLGPSDYFGEIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCS
DILKRNIQQYNSFVSLSV

>gi568815581f:68415400_68630446|GENSCAN_predicted_CDS_5|1497_bp
atggaggtggacaaactgcttcaaaagccaccagaaaacttggtcctgtggcataacagg
aacaaaaagcatatggcctcacgcccccggctccgagtctgcatcctcaaggccgtctgg
gcgttggctttggtgcggggctccccagccgccccgctcgcgctcgctgcccccacccca
cggctcctggggccctgggccctccgcggccctccccggccgccttcgcccccgcgcgcc
gcggcctcttcgctcaccctcccccatttcctgaaggacaacggctctattttactgggg
tccgccatcgtctcgtccgccggtcctggctcttcttgtaagccgagaaccatggagtct
ggcagtaccgccgccagtgaggaggcacgcagccttcgagaatgtgagctctacgtccag
aagcataacattcaagcgctgctcaaagattctattgtgcagttgtgcactgctcgacct
gagagacccatggcattcctcagggaatactttgagaggttggagaaggaggaggcaaaa
cagattcagaatctgcagaaagcaggcactcgtacagactcaagggaggatgagatttct
cctcctccacccaacccagtggttaaaggtaggaggcgacgaggtgctatcagcgctgag
gtctacacggaggaagatgcggcatcctatgttagaaaggttataccaaaagattacaag
acaatggccgctttagccaaagccattgaaaagaatgtgctgttttcacatcttgatgat
aatgagagaagtgatatttttgatgccatgttttcggtctcctttatcgcaggagagact
gtgattcagcaaggtgatgaaggggataacttctatgtgattgatcaaggagagacggat
gtctatgttaacaatgaatgggcaaccagtgttggggaaggagggagctttggagaactt
gctttgatttatggaacaccgagagcagccactgtcaaagcaaagacaaatgtgaaattg
tggggcatcgaccgagacagctatagaagaatcctcatgggaagcacactgagaaagcgg
aagatgtatgaggaattccttagtaaagtctctattttagagtctctggacaagtgggaa
cgtcttacggtagctgatgcattggaaccagtgcagtttgaagatgggcagaagattgtg
gtgcagggagaaccaggggatgagttcttcattattttagaggggtcagctgctgtgcta
caacgtcggtcagaaaatgaagagtttgttgaagtgggaagattggggccttctgattat
tttggtgaaattgcactactgatgaatcgtcctcgtgctgccacagttgttgctcgtggc
cccttgaagtgcgttaagctggaccgacctagatttgaacgtgttcttggcccatgctca
gacatcctcaaacgaaacatccagcagtacaacagttttgtgtcactgtctgtctga

>gi568815581f:68415400_68630446|GENSCAN_predicted_peptide_6|541_aa
MPGLRRDRLLTLLLLGALLSADLYFHLWPQVQRQLRPRERPRGCPCTGRASSLARDSAAA
ASDPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQ
EALRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPV
VSKLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMR
QQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEI
LQSVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWI
RSYTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKF
GDDGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRES
LLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQLAPDSGQANLT
S

>gi568815581f:68415400_68630446|GENSCAN_predicted_CDS_6|1626_bp
atgccggggctgcgccgggaccgcctactgactctgctgctgctgggcgcgctgctctcc
gccgacctctacttccacctctggccccaagtacagcgccagctgcggcctcgggagcgc
ccgcgggggtgcccgtgcaccggccgcgcctcctccctggcgcgggactcggccgcagct
gcctcggaccccggcacgatcgtgcacaacttttcccgaaccgagccccggactgaaccg
gctggcggcagccacagcgggtcgagctccaagttgcaggccctcttcgcccacccgctg
tacaacgtcccggaggagccgcctctcctgggagccgaggactcgctcctggccagccag
gaggcgctgcggtattaccggaggaaggtggcccgctggaacaggcgacacaagatgtac
agagagcagatgaaccttacctccctggaccccccactgcagctccgactcgaggccagc
tgggtccagttccacctgggtattaaccgccatgggctctactcccggtccagccctgtt
gtcagcaaacttctgcaagacatgaggcactttcccaccatcagtgctgattacagtcaa
gatgagaaagccttgctgggggcatgtgactgcacccagattgtgaaacccagtggggtc
cacctcaagctggtgctgaggttctcggatttcgggaaggccatgttcaaacccatgaga
cagcagcgagatgaggagacaccagtggacttcttctacttcattgactttcagagacac
aatgctgagatcgcagctttccatctggacaggattctggacttccgacgggtgccgcca
acagtggggaggatagtaaatgtcaccaaggaaatcctagaggtcaccaagaatgaaatc
ctgcagagtgttttctttgtctctccagcgagcaacgtgtgcttcttcgccaagtgtcca
tacatgtgcaagacggagtatgctgtctgtggcaacccacacctgctggagggttccctc
tctgccttcctgccgtccctcaacctggcccccaggctgtctgtgcccaacccctggatc
cgctcctacacactggcaggaaaagaggagtgggaggtcaatcccctttactgtgacaca
gtgaaacagatctacccgtacaacaacagccagcggctcctcaatgtcatcgacatggcc
atcttcgacttcttgatagggaatatggaccggcaccattatgagatgttcaccaagttc
ggggatgatgggttccttattcaccttgacaacgccagagggttcggacgacactcccat
gatgaaatctccatcctctcgcctctctcccagtgctgcatgataaaaaagaaaacactt
ttgcacctgcagctgctggcccaagctgactacagactcagcgatgtgatgcgagaatca
ctgctggaagaccagctcagccctgtcctcactgaaccccacctccttgccctggatcga
aggctccaaaccatcctaaggacagtggaggggtgcatagtggcccatggacagcagagt
gtcatagtcgacggcccagtggaacagttggccccagactctggccaggctaacttgaca
agctaa