Result of FASTA (omim) for pF1KB3090
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3090, 618 aa
  1>>>pF1KB3090 618 - 618 aa - 618 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8215+/-0.000396; mu= 18.2315+/- 0.025
 mean_var=120.1113+/-25.651, 0's: 0 Z-trim(115.1): 154  B-trim: 885 in 1/54
 Lambda= 0.117026
 statistics sampled from 25126 (25324) to 25126 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.297), width:  16
 Scan time: 11.380

The best scores are:                                      opt bits E(85289)
NP_001243092 (OMIM: 601712) baculoviral IAP repeat ( 618) 4196 720.2 5.3e-207
NP_001157 (OMIM: 601712) baculoviral IAP repeat-co ( 618) 4196 720.2 5.3e-207
NP_001243095 (OMIM: 601712) baculoviral IAP repeat ( 569) 3862 663.7 4.7e-190
XP_016873132 (OMIM: 601721) PREDICTED: baculoviral ( 604) 3045 525.8 1.6e-148
NP_001156 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 3045 525.8 1.6e-148
NP_892007 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 3045 525.8 1.6e-148
NP_001158 (OMIM: 300079,300635,308240) E3 ubiquiti ( 497)  688 127.8 8.9e-29
XP_011529631 (OMIM: 300079,300635,308240) PREDICTE ( 497)  688 127.8 8.9e-29
XP_006724817 (OMIM: 300079,300635,308240) PREDICTE ( 497)  688 127.8 8.9e-29
NP_001191330 (OMIM: 300079,300635,308240) E3 ubiqu ( 497)  688 127.8 8.9e-29
NP_071444 (OMIM: 605737) baculoviral IAP repeat-co ( 280)  390 77.2 8.4e-14
NP_647478 (OMIM: 605737) baculoviral IAP repeat-co ( 298)  384 76.2 1.8e-13
NP_004527 (OMIM: 600355) baculoviral IAP repeat-co (1403)  310 64.4 2.9e-09
NP_075043 (OMIM: 600355) baculoviral IAP repeat-co (1241)  260 56.0 9.4e-07
XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 264)  217 48.0   5e-05
XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 390)  217 48.2 6.5e-05
NP_037394 (OMIM: 610082) E3 ubiquitin-protein liga ( 445)  217 48.2 7.2e-05
NP_001017368 (OMIM: 609735) E3 ubiquitin-protein l ( 363)  205 46.1 0.00025
XP_016860049 (OMIM: 605638) PREDICTED: baculoviral (3983)  217 49.2 0.00032
XP_011531307 (OMIM: 605638) PREDICTED: baculoviral (3989)  217 49.2 0.00032
XP_016860048 (OMIM: 605638) PREDICTED: baculoviral (4715)  217 49.3 0.00036
XP_011531305 (OMIM: 605638) PREDICTED: baculoviral (4779)  217 49.3 0.00036
XP_016860047 (OMIM: 605638) PREDICTED: baculoviral (4837)  217 49.3 0.00036
XP_005264512 (OMIM: 605638) PREDICTED: baculoviral (4840)  217 49.3 0.00036
XP_005264511 (OMIM: 605638) PREDICTED: baculoviral (4847)  217 49.3 0.00036
XP_016860046 (OMIM: 605638) PREDICTED: baculoviral (4847)  217 49.3 0.00036
XP_006712119 (OMIM: 605638) PREDICTED: baculoviral (4851)  217 49.3 0.00036
NP_057336 (OMIM: 605638) baculoviral IAP repeat-co (4857)  217 49.3 0.00036
XP_016860045 (OMIM: 605638) PREDICTED: baculoviral (4858)  217 49.3 0.00036
XP_005264510 (OMIM: 605638) PREDICTED: baculoviral (4861)  217 49.3 0.00037
XP_006712118 (OMIM: 605638) PREDICTED: baculoviral (4864)  217 49.3 0.00037
XP_005264509 (OMIM: 605638) PREDICTED: baculoviral (4870)  217 49.3 0.00037
XP_005264508 (OMIM: 605638) PREDICTED: baculoviral (4875)  217 49.3 0.00037
XP_006712117 (OMIM: 605638) PREDICTED: baculoviral (4878)  217 49.3 0.00037
XP_005264507 (OMIM: 605638) PREDICTED: baculoviral (4880)  217 49.3 0.00037
XP_005264506 (OMIM: 605638) PREDICTED: baculoviral (4884)  217 49.3 0.00037
NP_001243787 (OMIM: 608299) E3 ubiquitin-protein l ( 180)  190 43.2 0.00091
NP_079402 (OMIM: 608299) E3 ubiquitin-protein liga ( 372)  190 43.6  0.0015
NP_919247 (OMIM: 608299) E3 ubiquitin-protein liga ( 373)  190 43.6  0.0015
XP_016870773 (OMIM: 610933,614436) PREDICTED: E3 u ( 460)  182 42.3  0.0044
XP_006717379 (OMIM: 610933,614436) PREDICTED: E3 u ( 690)  182 42.5  0.0058
NP_001177652 (OMIM: 610933,614436) E3 ubiquitin-pr ( 696)  182 42.5  0.0058
XP_016870772 (OMIM: 610933,614436) PREDICTED: E3 u ( 723)  182 42.5   0.006
NP_612370 (OMIM: 610933,614436) E3 ubiquitin-prote ( 723)  182 42.5   0.006
NP_001005374 (OMIM: 610933,614436) E3 ubiquitin-pr ( 723)  182 42.5   0.006
NP_001005373 (OMIM: 610933,614436) E3 ubiquitin-pr ( 723)  182 42.5   0.006
XP_011524400 (OMIM: 608677,615092) PREDICTED: E3 u ( 516)  180 42.0   0.006
NP_001159 (OMIM: 603352) baculoviral IAP repeat-co ( 142)  172 40.1  0.0064
XP_016881362 (OMIM: 608677,615092) PREDICTED: E3 u ( 834)  180 42.3  0.0083
NP_065825 (OMIM: 608677,615092) E3 ubiquitin-prote (1006)  180 42.3  0.0095


>>NP_001243092 (OMIM: 601712) baculoviral IAP repeat-con  (618 aa)
 initn: 4196 init1: 4196 opt: 4196  Z-score: 3837.3  bits: 720.2 E(85289): 5.3e-207
Smith-Waterman score: 4196; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)

               10        20        30        40        50        60
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
              550       560       570       580       590       600

              610        
pF1KB3 KCPICRGIIKGTVRTFLS
       ::::::::::::::::::
NP_001 KCPICRGIIKGTVRTFLS
              610        

>>NP_001157 (OMIM: 601712) baculoviral IAP repeat-contai  (618 aa)
 initn: 4196 init1: 4196 opt: 4196  Z-score: 3837.3  bits: 720.2 E(85289): 5.3e-207
Smith-Waterman score: 4196; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)

               10        20        30        40        50        60
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
              550       560       570       580       590       600

              610        
pF1KB3 KCPICRGIIKGTVRTFLS
       ::::::::::::::::::
NP_001 KCPICRGIIKGTVRTFLS
              610        

>>NP_001243095 (OMIM: 601712) baculoviral IAP repeat-con  (569 aa)
 initn: 3862 init1: 3862 opt: 3862  Z-score: 3533.0  bits: 663.7 E(85289): 4.7e-190
Smith-Waterman score: 3862; 100.0% identity (100.0% similar) in 569 aa overlap (50-618:1-569)

      20        30        40        50        60        70         
pF1KB3 SIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVND
                                     ::::::::::::::::::::::::::::::
NP_001                               MSTYSTFPAGVPVSERSLARAGFYYTGVND
                                             10        20        30

      80        90       100       110       120       130         
pF1KB3 KVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPMRNSFAHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPMRNSFAHSL
               40        50        60        70        80        90

     140       150       160       170       180       190         
pF1KB3 SPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFL
              100       110       120       130       140       150

     200       210       220       230       240       250         
pF1KB3 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
              160       170       180       190       200       210

     260       270       280       290       300       310         
pF1KB3 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
              220       230       240       250       260       270

     320       330       340       350       360       370         
pF1KB3 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
              280       290       300       310       320       330

     380       390       400       410       420       430         
pF1KB3 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
              340       350       360       370       380       390

     440       450       460       470       480       490         
pF1KB3 EKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILDNLLKANVINKQEHDIIKQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILDNLLKANVINKQEHDIIKQK
              400       410       420       430       440       450

     500       510       520       530       540       550         
pF1KB3 TQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLE
              460       470       480       490       500       510

     560       570       580       590       600       610        
pF1KB3 EQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS
              520       530       540       550       560         

>>XP_016873132 (OMIM: 601721) PREDICTED: baculoviral IAP  (604 aa)
 initn: 2444 init1: 1945 opt: 3045  Z-score: 2787.2  bits: 525.8 E(85289): 1.6e-148
Smith-Waterman score: 3045; 72.8% identity (89.2% similar) in 604 aa overlap (20-618:2-604)

               10        20        30         40        50         
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNS-NKQKMKYDFSCELYRMSTYSTFPAG
                          .:.:.: .::.  .: :  ..:::.::::::::::::::::
XP_016                   MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAG
                                 10        20        30        40  

      60        70        80        90       100       110         
pF1KB3 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSA
       ::::::::::::::::::::::::::::::::::: :::: .:::.::::: :.:.: :.
XP_016 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFVQSLNSV
             50        60        70        80        90       100  

     120        130         140       150       160       170      
pF1KB3 S-LGSTSKNTSP--MRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNP
       . : .::. : :  . :: .::: :  :.:. : ::::.   ::.:::: .:.:.   . 
XP_016 NNLEATSQPTFPSSVTNS-THSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSS
            110       120        130       140       150       160 

        180       190       200       210       220       230      
pF1KB3 YSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDA
       :  ::..:.::.::.. ::::::::..::.::::::::::::::::::::::::::::.:
XP_016 YHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNA
             170       180       190       200       210       220 

        240       250        260       270       280       290     
pF1KB3 MSEHRRHFPNCPFLENSLE-TLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
       :::: ::::.:::.::.:. : :...:::::::::::..::. ::::: :.:::::::::
XP_016 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
             230       240       250       260       270       280 

         300       310       320       330       340       350     
pF1KB3 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
       :::: .:::::::::::::::::::::::.:::::::::.:::.:::::. ..:. ::::
XP_016 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
             290       300       310       320       330       340 

         360       370       380       390       400       410     
pF1KB3 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
       :::::::::. :.:::.  :::: :::. ::::.::::::...:.::::.:.::::::: 
XP_016 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
             350       360       370       380       390       400 

         420       430       440       450       460       470     
pF1KB3 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
       :::.:::::. :::.:  ::::::: ::::.:. .::  :.:: :::::::::::.::::
XP_016 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
             410       420       430       440       450       460 

         480       490       500       510       520       530     
pF1KB3 LPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTL
       .::::.:: :..::.::::.::::::  ::::::::::::::: ::..:.: :.: ...:
XP_016 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
             470       480       490       500       510       520 

         540       550       560       570       580       590     
pF1KB3 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
       :..:::....::::::::: : .::::::::::::::::::::::.:::::::::::..:
XP_016 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC
             530       540       550       560       570       580 

         600       610        
pF1KB3 APSLRKCPICRGIIKGTVRTFLS
       :::::::::::. ::::::::::
XP_016 APSLRKCPICRSTIKGTVRTFLS
             590       600    

>>NP_001156 (OMIM: 601721) baculoviral IAP repeat-contai  (604 aa)
 initn: 2444 init1: 1945 opt: 3045  Z-score: 2787.2  bits: 525.8 E(85289): 1.6e-148
Smith-Waterman score: 3045; 72.8% identity (89.2% similar) in 604 aa overlap (20-618:2-604)

               10        20        30         40        50         
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNS-NKQKMKYDFSCELYRMSTYSTFPAG
                          .:.:.: .::.  .: :  ..:::.::::::::::::::::
NP_001                   MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAG
                                 10        20        30        40  

      60        70        80        90       100       110         
pF1KB3 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSA
       ::::::::::::::::::::::::::::::::::: :::: .:::.::::: :.:.: :.
NP_001 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFVQSLNSV
             50        60        70        80        90       100  

     120        130         140       150       160       170      
pF1KB3 S-LGSTSKNTSP--MRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNP
       . : .::. : :  . :: .::: :  :.:. : ::::.   ::.:::: .:.:.   . 
NP_001 NNLEATSQPTFPSSVTNS-THSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSS
            110       120        130       140       150       160 

        180       190       200       210       220       230      
pF1KB3 YSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDA
       :  ::..:.::.::.. ::::::::..::.::::::::::::::::::::::::::::.:
NP_001 YHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNA
             170       180       190       200       210       220 

        240       250        260       270       280       290     
pF1KB3 MSEHRRHFPNCPFLENSLE-TLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
       :::: ::::.:::.::.:. : :...:::::::::::..::. ::::: :.:::::::::
NP_001 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
             230       240       250       260       270       280 

         300       310       320       330       340       350     
pF1KB3 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
       :::: .:::::::::::::::::::::::.:::::::::.:::.:::::. ..:. ::::
NP_001 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
             290       300       310       320       330       340 

         360       370       380       390       400       410     
pF1KB3 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
       :::::::::. :.:::.  :::: :::. ::::.::::::...:.::::.:.::::::: 
NP_001 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
             350       360       370       380       390       400 

         420       430       440       450       460       470     
pF1KB3 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
       :::.:::::. :::.:  ::::::: ::::.:. .::  :.:: :::::::::::.::::
NP_001 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
             410       420       430       440       450       460 

         480       490       500       510       520       530     
pF1KB3 LPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTL
       .::::.:: :..::.::::.::::::  ::::::::::::::: ::..:.: :.: ...:
NP_001 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
             470       480       490       500       510       520 

         540       550       560       570       580       590     
pF1KB3 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
       :..:::....::::::::: : .::::::::::::::::::::::.:::::::::::..:
NP_001 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC
             530       540       550       560       570       580 

         600       610        
pF1KB3 APSLRKCPICRGIIKGTVRTFLS
       :::::::::::. ::::::::::
NP_001 APSLRKCPICRSTIKGTVRTFLS
             590       600    

>>NP_892007 (OMIM: 601721) baculoviral IAP repeat-contai  (604 aa)
 initn: 2444 init1: 1945 opt: 3045  Z-score: 2787.2  bits: 525.8 E(85289): 1.6e-148
Smith-Waterman score: 3045; 72.8% identity (89.2% similar) in 604 aa overlap (20-618:2-604)

               10        20        30         40        50         
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNS-NKQKMKYDFSCELYRMSTYSTFPAG
                          .:.:.: .::.  .: :  ..:::.::::::::::::::::
NP_892                   MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAG
                                 10        20        30        40  

      60        70        80        90       100       110         
pF1KB3 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSA
       ::::::::::::::::::::::::::::::::::: :::: .:::.::::: :.:.: :.
NP_892 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFVQSLNSV
             50        60        70        80        90       100  

     120        130         140       150       160       170      
pF1KB3 S-LGSTSKNTSP--MRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNP
       . : .::. : :  . :: .::: :  :.:. : ::::.   ::.:::: .:.:.   . 
NP_892 NNLEATSQPTFPSSVTNS-THSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSS
            110       120        130       140       150       160 

        180       190       200       210       220       230      
pF1KB3 YSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDA
       :  ::..:.::.::.. ::::::::..::.::::::::::::::::::::::::::::.:
NP_892 YHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNA
             170       180       190       200       210       220 

        240       250        260       270       280       290     
pF1KB3 MSEHRRHFPNCPFLENSLE-TLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
       :::: ::::.:::.::.:. : :...:::::::::::..::. ::::: :.:::::::::
NP_892 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
             230       240       250       260       270       280 

         300       310       320       330       340       350     
pF1KB3 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
       :::: .:::::::::::::::::::::::.:::::::::.:::.:::::. ..:. ::::
NP_892 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
             290       300       310       320       330       340 

         360       370       380       390       400       410     
pF1KB3 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
       :::::::::. :.:::.  :::: :::. ::::.::::::...:.::::.:.::::::: 
NP_892 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
             350       360       370       380       390       400 

         420       430       440       450       460       470     
pF1KB3 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
       :::.:::::. :::.:  ::::::: ::::.:. .::  :.:: :::::::::::.::::
NP_892 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
             410       420       430       440       450       460 

         480       490       500       510       520       530     
pF1KB3 LPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTL
       .::::.:: :..::.::::.::::::  ::::::::::::::: ::..:.: :.: ...:
NP_892 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
             470       480       490       500       510       520 

         540       550       560       570       580       590     
pF1KB3 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
       :..:::....::::::::: : .::::::::::::::::::::::.:::::::::::..:
NP_892 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC
             530       540       550       560       570       580 

         600       610        
pF1KB3 APSLRKCPICRGIIKGTVRTFLS
       :::::::::::. ::::::::::
NP_892 APSLRKCPICRSTIKGTVRTFLS
             590       600    

>>NP_001158 (OMIM: 300079,300635,308240) E3 ubiquitin-pr  (497 aa)
 initn: 1048 init1: 507 opt: 688  Z-score: 637.6  bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)

              20        30        40        50        60        70 
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
                                     .:  :. :..:...::.: :::  .:::::
NP_001          MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
                        10        20        30        40        50 

              80        90       100       110       120       130 
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
       : ::: .: :.:: :   .: :. ::: . .:... :.: ::...   . .. : :.. .
NP_001 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
              60        70        80        90       100       110 

              140       150       160       170       180       190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
        ... ...   . .: .:   : .  .   : .  : :::..   : . :: .::::. .
NP_001 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
             120       130        140       150        160         

               200       210       220       230       240         
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
       .. ::  . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
NP_001 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
     170       180       190       200       210       220         

     250                  260            270       280       290   
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
       . .   ..:           :  :     : ::  . ::. ::  :  :  :. :::: :
NP_001 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
     230       240       250       260       270         280       

           300       310       320       330       340       350   
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
       ::: .:..: :::: : :::  :. ..::: .::::.: :..:...::::....:.    
NP_001 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
       290       300       310       320       330       340       

            360       370       380       390       400       410  
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
       : ::. :. :.. :             :. .   : .....:.:. :..:::.   .:. 
NP_001 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
         350                    360       370       380       390  

            420       430       440       450       460       470  
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
       .. ::  .: :::... .:. :.::. .. ..:.                          
NP_001 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
            400       410       420                                

            480       490       500       510       520       530  
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
                                  .:  ::                       ::: 
NP_001 ---------------------------SQTSLQ-----------------------KEI-
                                   430                             

            540       550       560       570       580       590  
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
                               : ::::::::::. ::.:::.....::.::::::.:
NP_001 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
                                 440       450       460       470 

            600       610        
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
       ..:: .. :::.:  .:    . :.:
NP_001 KQCAEAVDKCPMCYTVITFKQKIFMS
             480       490       

>>XP_011529631 (OMIM: 300079,300635,308240) PREDICTED: E  (497 aa)
 initn: 1048 init1: 507 opt: 688  Z-score: 637.6  bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)

              20        30        40        50        60        70 
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
                                     .:  :. :..:...::.: :::  .:::::
XP_011          MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
                        10        20        30        40        50 

              80        90       100       110       120       130 
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
       : ::: .: :.:: :   .: :. ::: . .:... :.: ::...   . .. : :.. .
XP_011 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
              60        70        80        90       100       110 

              140       150       160       170       180       190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
        ... ...   . .: .:   : .  .   : .  : :::..   : . :: .::::. .
XP_011 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
             120       130        140       150        160         

               200       210       220       230       240         
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
       .. ::  . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
XP_011 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
     170       180       190       200       210       220         

     250                  260            270       280       290   
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
       . .   ..:           :  :     : ::  . ::. ::  :  :  :. :::: :
XP_011 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
     230       240       250       260       270         280       

           300       310       320       330       340       350   
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
       ::: .:..: :::: : :::  :. ..::: .::::.: :..:...::::....:.    
XP_011 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
       290       300       310       320       330       340       

            360       370       380       390       400       410  
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
       : ::. :. :.. :             :. .   : .....:.:. :..:::.   .:. 
XP_011 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
         350                    360       370       380       390  

            420       430       440       450       460       470  
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
       .. ::  .: :::... .:. :.::. .. ..:.                          
XP_011 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
            400       410       420                                

            480       490       500       510       520       530  
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
                                  .:  ::                       ::: 
XP_011 ---------------------------SQTSLQ-----------------------KEI-
                                   430                             

            540       550       560       570       580       590  
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
                               : ::::::::::. ::.:::.....::.::::::.:
XP_011 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
                                 440       450       460       470 

            600       610        
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
       ..:: .. :::.:  .:    . :.:
XP_011 KQCAEAVDKCPMCYTVITFKQKIFMS
             480       490       

>>XP_006724817 (OMIM: 300079,300635,308240) PREDICTED: E  (497 aa)
 initn: 1048 init1: 507 opt: 688  Z-score: 637.6  bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)

              20        30        40        50        60        70 
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
                                     .:  :. :..:...::.: :::  .:::::
XP_006          MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
                        10        20        30        40        50 

              80        90       100       110       120       130 
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
       : ::: .: :.:: :   .: :. ::: . .:... :.: ::...   . .. : :.. .
XP_006 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
              60        70        80        90       100       110 

              140       150       160       170       180       190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
        ... ...   . .: .:   : .  .   : .  : :::..   : . :: .::::. .
XP_006 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
             120       130        140       150        160         

               200       210       220       230       240         
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
       .. ::  . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
XP_006 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
     170       180       190       200       210       220         

     250                  260            270       280       290   
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
       . .   ..:           :  :     : ::  . ::. ::  :  :  :. :::: :
XP_006 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
     230       240       250       260       270         280       

           300       310       320       330       340       350   
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
       ::: .:..: :::: : :::  :. ..::: .::::.: :..:...::::....:.    
XP_006 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
       290       300       310       320       330       340       

            360       370       380       390       400       410  
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
       : ::. :. :.. :             :. .   : .....:.:. :..:::.   .:. 
XP_006 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
         350                    360       370       380       390  

            420       430       440       450       460       470  
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
       .. ::  .: :::... .:. :.::. .. ..:.                          
XP_006 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
            400       410       420                                

            480       490       500       510       520       530  
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
                                  .:  ::                       ::: 
XP_006 ---------------------------SQTSLQ-----------------------KEI-
                                   430                             

            540       550       560       570       580       590  
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
                               : ::::::::::. ::.:::.....::.::::::.:
XP_006 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
                                 440       450       460       470 

            600       610        
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
       ..:: .. :::.:  .:    . :.:
XP_006 KQCAEAVDKCPMCYTVITFKQKIFMS
             480       490       

>>NP_001191330 (OMIM: 300079,300635,308240) E3 ubiquitin  (497 aa)
 initn: 1048 init1: 507 opt: 688  Z-score: 637.6  bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)

              20        30        40        50        60        70 
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
                                     .:  :. :..:...::.: :::  .:::::
NP_001          MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
                        10        20        30        40        50 

              80        90       100       110       120       130 
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
       : ::: .: :.:: :   .: :. ::: . .:... :.: ::...   . .. : :.. .
NP_001 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
              60        70        80        90       100       110 

              140       150       160       170       180       190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
        ... ...   . .: .:   : .  .   : .  : :::..   : . :: .::::. .
NP_001 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
             120       130        140       150        160         

               200       210       220       230       240         
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
       .. ::  . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
NP_001 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
     170       180       190       200       210       220         

     250                  260            270       280       290   
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
       . .   ..:           :  :     : ::  . ::. ::  :  :  :. :::: :
NP_001 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
     230       240       250       260       270         280       

           300       310       320       330       340       350   
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
       ::: .:..: :::: : :::  :. ..::: .::::.: :..:...::::....:.    
NP_001 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
       290       300       310       320       330       340       

            360       370       380       390       400       410  
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
       : ::. :. :.. :             :. .   : .....:.:. :..:::.   .:. 
NP_001 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
         350                    360       370       380       390  

            420       430       440       450       460       470  
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
       .. ::  .: :::... .:. :.::. .. ..:.                          
NP_001 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
            400       410       420                                

            480       490       500       510       520       530  
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
                                  .:  ::                       ::: 
NP_001 ---------------------------SQTSLQ-----------------------KEI-
                                   430                             

            540       550       560       570       580       590  
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
                               : ::::::::::. ::.:::.....::.::::::.:
NP_001 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
                                 440       450       460       470 

            600       610        
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
       ..:: .. :::.:  .:    . :.:
NP_001 KQCAEAVDKCPMCYTVITFKQKIFMS
             480       490       




618 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 12:20:33 2016 done: Thu Nov  3 12:20:34 2016
 Total Scan time: 11.380 Total Display time:  0.140

Function used was FASTA [36.3.4 Apr, 2011]
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