GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:11:10

Sequence gi568815586f:112346274_112604761 : 258488 bp : 44.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6807   6935  129  2  0   53   48   143 0.875   4.98
 1.02 PlyA +   8602   8607    6                               1.05

 2.03 PlyA -   8658   8653    6                               1.05
 2.02 Term -  15456  15301  156  0  0   27   49    88 0.019  -3.27
 2.01 Init -  35855  35562  294  2  0  100   89   623 0.965  58.79
 2.00 Prom -  47300  47261   40                              -5.56

 3.09 PlyA -  51912  51907    6                               1.05
 3.08 Term -  59103  58951  153  0  0   88   36   174 0.999  10.12
 3.07 Intr -  59764  59580  185  2  2  104  107   296 0.999  32.61
 3.06 Intr -  60069  60021   49  0  1   85   99    23 0.999   1.35
 3.05 Intr -  60617  60474  144  2  0   56  100   132 0.998  11.68
 3.04 Intr -  62065  61967   99  1  0   97   95   161 0.567  18.01
 3.03 Intr -  62383  62147  237  1  0   26  116   294 0.993  23.81
 3.02 Intr -  63149  63046  104  0  2   56   68    84 0.991   3.09
 3.01 Init -  63407  63314   94  2  1   82  116    31 0.884   6.16
 3.00 Prom -  67465  67426   40                              -5.46

 4.03 PlyA -  67761  67756    6                               1.05
 4.02 Term -  72792  72449  344  1  2   65   49   182 0.658   6.67
 4.01 Init -  76532  76520   13  2  1   84   98     8 0.441   1.66
 4.00 Prom -  86765  86726   40                              -3.36

 5.00 Prom +  87316  87355   40                              -5.86
 5.01 Init +  89166  89200   35  2  2   66   76     6 0.172  -3.46
 5.02 Intr + 100003 100125  123  1  0   83   97    50 0.893   5.10
 5.03 Intr + 104045 104239  195  2  0   43   86   213 0.963  15.13
 5.04 Intr + 106922 107114  193  2  1   49   99   172 0.999  13.89
 5.05 Intr + 108291 108407  117  2  0   49   99   129 0.998  10.76
 5.06 Intr + 109677 109790  114  2  0    7  107    62 0.591   0.64
 5.07 Intr + 126671 126767   97  1  1  142   95    41 0.997   9.78
 5.08 Intr + 131378 131457   80  0  2  123  103    74 0.999  11.67
 5.09 Intr + 131584 131742  159  0  0   36   94   152 0.993  10.78
 5.10 Intr + 135801 135932  132  2  0  101  108   160 0.981  20.14
 5.11 Intr + 140202 140356  155  2  2   59   61   203 0.999  13.57
 5.12 Intr + 142170 142237   68  0  2  118   98    95 0.966  12.05
 5.13 Intr + 142751 142902  152  0  2   93   81   178 0.961  17.48
 5.14 Intr + 155029 155061   33  0  0  130   98   -15 0.461   2.12
 5.15 Intr + 155871 155983  113  2  2   67   89     9 0.384  -1.92
 5.16 Term + 158422 158491   70  1  1  127   54    55 0.480   3.41
 5.17 PlyA + 160967 160972    6                               1.05

 6.10 PlyA - 162664 162659    6                               1.05
 6.09 Term - 173747 173666   82  1  1   86   55   135 0.737   7.17
 6.08 Intr - 187485 187323  163  1  1   90   77    46 0.085   2.73
 6.07 Intr - 194140 194055   86  0  2   53   96    13 0.133  -1.94
 6.06 Intr - 195213 195131   83  0  2   97   89    62 0.645   5.64
 6.05 Intr - 196477 196405   73  0  1   77   84    27 0.400   0.61
 6.04 Intr - 202768 202711   58  2  1   97  101    39 0.626   4.04
 6.03 Intr - 217755 217560  196  0  1  -22  101   180 0.067   7.29
 6.02 Intr - 237207 237019  189  0  0   90   53    47 0.056   1.18
 6.01 Intr - 246573 246411  163  2  1   84   23   117 0.115   4.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 160727 160660   68  0  2   10   43   225 0.864   8.30


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:112346274_112604761|GENSCAN_predicted_peptide_1|42_aa
TKTEHQLYGNQQKNFIRTKELTDSHLTGSHHYQVKTMSDDVS

>gi568815586f:112346274_112604761|GENSCAN_predicted_CDS_1|129_bp
accaaaacagaacatcaactctatggaaaccagcagaagaatttcataagaaccaaggag
ctgactgacagccacctgactggcagccaccattaccaggttaaaactatgtctgatgat
gtttcttga

>gi568815586f:112346274_112604761|GENSCAN_predicted_peptide_2|149_aa
MGSSAAAAAAAAAAADSAQWLSVKEETIFLHDGLIRVTDLAELPSEILGAPEAADTDLEV
SEAAPGPRHRTDPLARHPRVGPPPRLSRGLASRRLPGQGPSGDPYEHRVSLVVKTVGFGI
DTSRQLLVQFYHLSEFQFLGYKMPPFKGK

>gi568815586f:112346274_112604761|GENSCAN_predicted_CDS_2|450_bp
atgggctcgtcggcggccgcggcggcggcggcggcggcggccgctgactcggcgcagtgg
ctctcggtgaaggaagagaccatcttcctgcacgacgggctgatccgggtcaccgacctg
gccgagctgcccagcgagatcctcggggccccagaggccgcggacaccgacctggaggtg
agcgaggcggcccccggcccccgccatcggactgacccactcgcccggcacccccgggtc
gggccccctcctcgcctcagccgcggcctcgcctcccggcggctgccggggcagggtcct
tcaggggatccttatgaacacagagtgagcctagtggttaagactgtaggctttggcatt
gacacatctcgccagctgttagttcagttctaccacctatcagaatttcaatttcttggt
tataaaatgccccccttcaagggtaaataa

>gi568815586f:112346274_112604761|GENSCAN_predicted_peptide_3|354_aa
MPQIRKEVRLALPMIAYRPEAGTLILFPILQGHKEGEVECRSGSLRFFATLLGWGNEALS
GTRSRLMAGEKVEKPDTKEKKPEAKKVDAGGKVKKGNLKAKKPKKGKPHCSRNPVLVRGI
GRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPR
YYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLL
VTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFD
TEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTNGIYPHKLVF

>gi568815586f:112346274_112604761|GENSCAN_predicted_CDS_3|1065_bp
atgccccagatccggaaggaagtgagactcgcacttcccatgattgcttatagaccggaa
gccgggaccttaattctctttcccatcttgcaagggcacaaagagggtgaggtagaatgc
cgtagtggctccctccggttcttcgccactctcttgggctgggggaacgaggccctttcg
gggacccgtagcagactgatggcgggtgaaaaagttgagaagccagatactaaagagaag
aaacccgaagccaagaaggttgatgctggtggcaaggtgaaaaagggtaacctcaaagct
aaaaagcccaagaaggggaagccccattgcagccgcaaccctgtccttgtcagaggaatt
ggcaggtattcccgatctgccatgtattccagaaaggccatgtacaagaggaagtactca
gccgctaaatccaaggttgaaaagaaaaagaaggagaaggttctcgcaactgttacaaaa
ccagttggtggtgacaagaacggcggtacccgggtggttaaacttcgcaaaatgcctaga
tattatcctactgaagatgtgcctcgaaagctgttgagccacggcaaaaaacccttcagt
cagcacgtgagaaaactgcgagccagcattacccccgggaccattctgatcatcctcact
ggacgccacaggggcaagagggtggttttcctgaagcagctggctagtggcttattactt
gtgactggacctctggtcctcaatcgagttcctctacgaagaacacaccagaaatttgtc
attgccacttcaaccaaaatcgatatcagcaatgtaaaaatcccaaaacatcttactgat
gcttacttcaagaagaagaagctgcggaagcccagacaccaggaaggtgagatcttcgac
acagaaaaagagaaatatgagattacggagcagcgcaagattgatcagaaagctgtggac
tcacaaattttaccaaaaatcaaagctattcctcagctccagggctacctgcgatctgtg
tttgctctgacgaatggaatttatcctcacaaattggtgttctaa

>gi568815586f:112346274_112604761|GENSCAN_predicted_peptide_4|118_aa
MDTRGSAGLGHIGLARGRPARDRTRGRASRPRTDPPPGLGIPETVQLPPGPARSSSAPAL
RRRRPRDVTARDARRHFLLPVSGGPSDGREWQRGGSAEAPRTVSKASLLPPGNRGRQV

>gi568815586f:112346274_112604761|GENSCAN_predicted_CDS_4|357_bp
atggacacgaggggctccgctgggctcggtcacatcgggctggcccgagggaggcccgct
cgggaccggacgcggggcagagccagccggccgcgcacagacccccctccaggcctgggg
atcccggagactgtgcagctgccccccggcccggctcgctcctcctccgcccccgccctt
cgccgccgtcgcccccgtgatgtcaccgctcgcgacgcccgccgccacttcctgcttccc
gtcagcggaggaccgagcgacggccgggaatggcagcgcgggggctccgcggaggcgcca
cgcacagtgtccaaagcatccttgcttcctcctggaaaccgcggccgccaggtgtga

>gi568815586f:112346274_112604761|GENSCAN_predicted_peptide_5|611_aa
MTVVTVREQISRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTH
IKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWF
HGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIR
CQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVREL
SKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLH
DGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVI
VMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTER
TVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVID
ILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQ
GIIRTKNKVLKKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTPPCAEMREDSARVYEN
VGLMQQQKSFR

>gi568815586f:112346274_112604761|GENSCAN_predicted_CDS_5|1836_bp
atgacagtggtgacagtcagggaacagataagcagatggtttcacccaaatatcactggt
gtggaggcagaaaacctactgttgacaagaggagttgatggcagttttttggcaaggcct
agtaaaagtaaccctggagacttcacactttccgttagaagaaatggagctgtcacccac
atcaagattcagaacactggtgattactatgacctgtatggaggggagaaatttgccact
ttggctgagttggtccagtattacatggaacatcacgggcaattaaaagagaagaatgga
gatgtcattgagcttaaatatcctctgaactgtgcagatcctacctctgaaaggtggttt
catggacatctctctgggaaagaagcagagaaattattaactgaaaaaggaaaacatggt
agttttcttgtacgagagagccagagccaccctggagattttgttctttctgtgcgcact
ggtgatgacaaaggggagagcaatgacggcaagtctaaagtgacccatgttatgattcgc
tgtcaggaactgaaatacgacgttggtggaggagaacggtttgattctttgacagatctt
gtggaacattataagaagaatcctatggtggaaacattgggtacagtactacaactcaag
cagccccttaacacgactcgtataaatgctgctgaaatagaaagcagagttcgagaacta
agcaaattagctgagaccacagataaagtcaaacaaggcttttgggaagaatttgagaca
ctacaacaacaggagtgcaaacttctctacagccgaaaagagggtcaaaggcaagaaaac
aaaaacaaaaatagatataaaaacatcctgccctttgatcataccagggttgtcctacac
gatggtgatcccaatgagcctgtttcagattacatcaatgcaaatatcatcatgcctgaa
tttgaaaccaagtgcaacaattcaaagcccaaaaagagttacattgccacacaaggctgc
ctgcaaaacacggtgaatgacttttggcggatggtgttccaagaaaactcccgagtgatt
gtcatgacaacgaaagaagtggagagaggaaagagtaaatgtgtcaaatactggcctgat
gagtatgctctaaaagaatatggcgtcatgcgtgttaggaacgtcaaagaaagcgccgct
catgactatacgctaagagaacttaaactttcaaaggttggacaagggaatacggagaga
acggtctggcaataccactttcggacctggccggaccacggcgtgcccagcgaccctggg
ggcgtgctggacttcctggaggaggtgcaccataagcaggagagcatcatggatgcaggg
ccggtcgtggtgcactgcagtgctggaattggccggacagggacgttcattgtgattgat
attcttattgacatcatcagagagaaaggtgttgactgcgatattgacgttcccaaaacc
atccagatggtgcggtctcagaggtcagggatggtccagacagaagcacagtaccgattt
atctatatggcggtccagcattatattgaaacactacagcgcaggattgaagaagagcag
ggtatcatcagaaccaaaaataaagttttaaagaaaagcaagaggaaagggcacgaatat
acaaatattaagtattctctagcggaccagacgagtggagatcagagccctctcccgcct
tgtactccaacgccaccctgtgcagaaatgagagaagacagtgctagagtctatgaaaac
gtgggcctgatgcaacagcagaaaagtttcagatga

>gi568815586f:112346274_112604761|GENSCAN_predicted_peptide_6|364_aa
XPLTGISRVAPLNYKGLGMEKCRDHLRNIIVSATEETHTQVSTQTGYTVGHQYLQMFLGE
QIWGQGEEYSASEVKLLDKEKLGANPIPYLTLRKELNFSVPQFPRLQNVENSDFRGAVKR
ATKRAFQKDRRIQRKALRPQNLNVSEEVKAQCNWSVEGGSSQEPGHTRLVDHDKKVGYHL
ECNDGTIYLQKNKLRAPTDSTLCCYQKAVPIQAPREGSWISRKKEFGVINFNKVEIVSIL
FTAEVAAPSTVPGTCCGTWRSERVLMCQRPHRQAVQGWDWCQPEWEVPVRCKKPINYAGW
RSAPTPTLTPQTVHFNHPPNDEVRASRLKDIRPQPRARLLCGQSLAYEHRPLLQGAQSHR
PPKG

>gi568815586f:112346274_112604761|GENSCAN_predicted_CDS_6|1095_bp
nncccattgacaggaataagtcgtgtggccccgcttaactacaagggtctgggaatggag
aagtgccgggaccacctgaggaacattattgtctctgccacagaggagacacacactcaa
gtcagcacacaaacaggatatacagtcggccatcagtatctgcagatgtttctaggagag
caaatatgggggcaaggagaggaatacagtgcttcagaggtcaaactcttggataaagag
aaacttggtgcaaatcctattccctatctgaccttgagaaaagaactcaacttttctgtg
cctcagtttcctcgtctgcaaaatgttgaaaatagtgacttcagaggggctgttaaaaga
gcaacaaagagagccttccagaaagacagacgaatccagagaaaggccctgaggccacag
aatctcaacgtatctgaggaggtgaaagcccagtgcaactggagtgttgaaggaggcagc
agccaggaaccaggtcatacccgactcgtagaccatgataagaaggttggatatcatctc
gaatgcaatgatgggaccatctacttgcagaaaaacaagctcagggctcccactgattct
acattatgctgttatcagaaagcggtcccaatccaggccccaagagagggttcttggatc
tcacgcaagaaagaattcggggttataaacttcaacaaggtagagatcgtgtccatcttg
ttcacagccgaagttgcagcacctagcacagtgcctggcacatgttgtggaacttggcgc
tcagagagagtcctgatgtgccagagaccacacagacaagcagtccagggttgggactgg
tgccagccagaatgggaggtgcctgtccgatgcaaaaagcccattaattacgctggctgg
aggtcagctcccacacccacactcactccacagacagtacattttaaccacccacccaat
gatgaggtgcgggcatcacgactaaaggacatcagaccccagcctcgagcaaggctcctg
tgcggccagagcctcgcctacgagcaccgccctctgctccagggtgcccagtcccatcga
ccacccaagggctga