GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:05:31

Sequence gi568815581r:67240846_67466519 : 225674 bp : 45.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    966    961    6                               1.05
 1.02 Term -  35503  35270  234  1  0   39   46   335 0.865  20.72
 1.01 Init -  38672  38553  120  2  0   48   72    29 0.214  -2.51
 1.00 Prom -  45710  45671   40                              -5.06

 2.00 Prom +  46520  46559   40                              -4.56
 2.01 Init +  49366  49414   49  0  1   75   58    21 0.255  -3.09
 2.02 Intr +  52744  52887  144  2  0  110    9   169 0.142  11.45
 2.03 Term +  56440  56570  131  2  2  103   54   106 0.971   7.04
 2.04 PlyA +  57270  57275    6                               1.05

 3.13 PlyA -  57316  57311    6                               1.05
 3.12 Term -  58091  58000   92  0  2   38   48    61 0.087  -5.02
 3.11 Intr -  59862  59829   34  0  1  125  108    35 0.220   7.00
 3.10 Intr -  62556  62406  151  2  1   86   28    57 0.026  -0.34
 3.09 Intr -  83506  83430   77  1  2   88   53   101 0.247   4.91
 3.08 Intr -  91198  90989  210  1  0   92   22   110 0.136   3.91
 3.07 Intr - 101418 101341   78  0  0   97   95    -2 0.542   1.15
 3.06 Intr - 103935 103761  175  2  1   14   66    77 0.674  -1.96
 3.05 Intr - 105012 104900  113  0  2   65  108   102 0.794   9.08
 3.04 Intr - 106405 106271  135  1  0   80  110   -14 0.602   0.76
 3.03 Intr - 106640 106491  150  2  0   22   83    93 0.853   2.56
 3.02 Intr - 107809 107705  105  1  0   65  110    19 0.821   2.21
 3.01 Init - 109479 109384   96  0  0   89   94    79 0.635   8.91
 3.00 Prom - 114567 114528   40                              -1.16

 4.04 PlyA - 114761 114756    6                               1.05
 4.03 Term - 116586 116528   59  1  2  113   54    91 0.786   6.05
 4.02 Intr - 119301 119265   37  0  1   83  100    10 0.690  -0.46
 4.01 Init - 125674 125567  108  1  0  115  100   234 0.998  27.52
 4.00 Prom - 126904 126865   40                              -6.86

 5.00 Prom + 134949 134988   40                              -8.46
 5.01 Init + 136376 136497  122  1  2   63   24   157 0.742   4.46
 5.02 Intr + 137246 137357  112  2  1   39   99   138 0.700  10.38
 5.03 Intr + 137769 138349  581  2  2   94   38   177 0.090   4.80
 5.04 Term + 157639 157831  193  1  1   51   47   231 0.728  12.19
 5.05 PlyA + 158726 158731    6                               1.05

 6.06 PlyA - 158812 158807    6                               1.05
 6.05 Term - 159175 159155   21  1  0  106   50    16 0.006  -2.09
 6.04 Intr - 192407 192313   95  0  2  108  113     2 0.175   4.38
 6.03 Intr - 195830 195699  132  0  0   37  104    31 0.075   0.22
 6.02 Intr - 200771 200521  251  1  2   81   96    12 0.003  -1.62
 6.01 Init - 215411 215338   74  2  2   70   93    48 0.182   4.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  56202  56211   10  2  1   66  113     2 0.861   1.08
S.002 Term + 137769 138398  630  2  0   94   35   171 0.901   6.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:67240846_67466519|GENSCAN_predicted_peptide_1|117_aa
MTICKLGSPQNHSRFRDSSVATWWKKVYRQKMGNDVQNLEAEGQRQDQENGSLLNIKVNQ
EAEIATYRHLLDDDEDFNLCDALDSSNSMQTIHKTTTPQIVDGKEVCETNDTKVLRH

>gi568815581r:67240846_67466519|GENSCAN_predicted_CDS_1|354_bp
atgacaatttgcaaattgggtagcccccagaatcacagcagattcagagattccagcgta
gccacgtggtggaagaaggtttatagacaaaaaatgggaaatgacgtacagaatttggaa
gcagaggggcagcgccaggaccaggagaacgggtccttgctaaacatcaaggtcaatcag
gaggctgagatcgccacctatcgccacctgctagacgacgacgaggacttcaatctttgt
gatgccctggacagcagcaactccatgcaaaccatccataagaccaccaccccccagata
gtggatggtaaagaggtgtgtgagaccaacgacaccaaagttctgagacattaa

>gi568815581r:67240846_67466519|GENSCAN_predicted_peptide_2|107_aa
MGFHHVAQAGLKLLSSGLRPFLGLKLLGLPQGPERLTTHGSTGPLVTTERRLQLFLATLR
EIKERLRPFLGLKLLGLPQGPERLTTYGSTGPLVTTERRLQLFLATL

>gi568815581r:67240846_67466519|GENSCAN_predicted_CDS_2|324_bp
atggggtttcaccatgttgcccaggctggtctcaaactcctgagctcaggcctgcgtccc
ttcctggggctgaagcttctgggcctgccccagggtcctgaacggctgacaacacacgga
tcaactggaccactggtgaccacagaaaggaggctgcagctgtttcttgctacgcttcga
gagatcaaagagcgcctgcgtcccttcctggggctgaagcttctgggcctgccccagggt
cctgaacggctaacaacatacgggtcaactggaccactggtgaccacagaaaggaggctg
cagctgtttcttgctaccctttga

>gi568815581r:67240846_67466519|GENSCAN_predicted_peptide_3|471_aa
MVQQCCTYVEEITDLPIKLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAA
SILQELQVETYGSMEKKERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEENTEKLK
LKYYNLMIQLDQHEGSYLSICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQ
SDLVHRISGDKKLEEIPKYKDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGS
TEEGEKRWKDLKNRVVEHNIRIMAKYYTRITMKRMAQLLDLSVDVTLMQEVASHGLGKLC
PCGFAGYSPPPGCFHGLALSVAFPGARCKLSVDLPFWDLEDSGPLLTAPLGHAPETSQKQ
LDHLDILQSIPLGHNIDDRRMTVPIIVQMIHQYLSCTTSGLFSPICYFSNYLFRVDFKQL
KACTATPCLAVIGVQVMFGYTILSHWKVFRGNNMHGAVISYDNHYCFCNAS

>gi568815581r:67240846_67466519|GENSCAN_predicted_CDS_3|1416_bp
atggttcaacagtgctgtacttatgttgaggaaatcacagaccttcctatcaaacttcga
ttaattgatactctacgaatggttaccgaaggcaagatttatgttgaaattgagcgtgcg
cgactgactaaaacattagcaactataaaagaacaaaatggtgatgtgaaagaggcagcc
tccattttacaggagttacaggtggaaacctacgggtcaatggaaaagaaagagcgagtg
gaatttattttggagcaaatgaggctctgcctagctgtgaaggattacattcgaacacaa
atcatcagcaagaaaattaacaccaaatttttccaggaagaaaatacagagaaattaaag
ttgaagtactataatttaatgattcagctggatcaacatgagggatcctatttgtctatt
tgtaagcactacagagcaatatatgatactccctgtatacaggcagaaagtgaaaaatgg
cagcaggctctgaagagtgttgtactctatgttatcctggctccttttgacaatgaacag
tcagatttggttcaccgaataagtggtgacaagaagttagaagaaattcccaaatacaag
gatcttttaaagctttttaccacaatggagttgatgcgttggtccacacttgttgaggac
tatggaatggaattaagaaaaggttcccttgagagtcctgcaacggatgtttttggttct
acagaggaaggtgaaaaaaggtggaaagacttgaagaacagagttgttgaacataatatt
agaataatggccaagtattatactcggataacaatgaaaaggatggcacagcttctggat
ctatctgttgatgtcacgctgatgcaagaggtggcctcccatggccttgggaagctctgc
ccttgcggctttgcagggtatagcccccctcctggctgctttcatgggctggcattgtct
gtggcttttccaggtgcacggtgcaagctgtcagtggatttaccattctgggatctggag
gacagtggcccacttctcacagccccactaggccatgccccagagacatcccaaaagcag
ctggaccatctggacatcctgcagagcatcccactaggccacaatattgatgacaggaga
atgacagttccaattattgttcagatgatacatcaatacctctcatgcaccacctcaggc
cttttcagccccatctgttacttttccaactacctcttccgcgtagacttcaaacaactt
aaagcttgcacggccacaccgtgtcttgccgttattggggtgcaggtgatgtttggttac
acaatcttgtcccactggaaggtcttcaggggcaataacatgcatggagctgtcatctcc
tatgataaccattactgcttctgtaatgcctcctga

>gi568815581r:67240846_67466519|GENSCAN_predicted_peptide_4|67_aa
MADGGSERADGRIVKMEVDYSATVDQRLPECAKLAKIVTIEMTLIKAKGFRYGIDIPYLS
CSSEDVL

>gi568815581r:67240846_67466519|GENSCAN_predicted_CDS_4|204_bp
atggcggacggcggctcggagcgggctgacgggcgcatcgtcaagatggaggtggactac
agcgccacggtggatcagcgcctacccgagtgtgcgaagctagccaagatagtaaccata
gagatgactttgatcaaagcgaaaggcttccgatatggtatcgacatcccgtatcttagt
tgcagtagtgaagatgtgctatga

>gi568815581r:67240846_67466519|GENSCAN_predicted_peptide_5|335_aa
MGLPSPPRPLLMSASLALAPPAPTSRPQAHCIGADAPAPASSLAGLGGAPRFPPRGSAAG
RTMLLKEYRICMPLTVDEVGVRGGALRPRDLHAPSPAGGTSEPLGEVPAGPDFSPSPRAW
AQLPARPPFEARDPAVSFRKPPGSETFCVSCFFRRGERRASRERRGLRRGHRRALQHVVP
GPRLPAGGAGRGAGARPPSAALLSFSRSCEAASSSIQEVVTQIGLFRPRLPFLPLLPPHL
CGDSTTAERLCPGTAREPKAKQGNVKLTSVVWHWLCDVQLGVVEKNWALPVDQCRLQELQ
FLVHLIDLLSILLSCNGFPRIQKAVMDQTSSSDHQ

>gi568815581r:67240846_67466519|GENSCAN_predicted_CDS_5|1008_bp
atggggctaccctccccgccgcggccgctgctgatgtcagcctcgctcgcgctcgctcct
cccgcacccacctcccggccccaggcacactgcatcggcgcggacgctccggccccggcg
agcagccttgctggtcttgggggcgccccccgcttcccgccccgggggtccgcggccggc
aggaccatgctgctgaaagagtaccggatctgcatgccgctcaccgtagacgaggtaggg
gtgcgaggaggagccctgcgccctcgggatctgcacgccccgagccccgcgggaggaacc
tctgagcccttaggggaggtccctgcggggcccgacttctcgccgtcgccgcgggcttgg
gcgcagctcccggcacgtccgcccttcgaggctcgggacccggctgtgtcctttcgcaaa
ccgcctggctcggaaactttctgcgtctcttgtttcttccgccgcggggagcggcgcgcg
agccgggagcggcgggggctgcgacgcggccacaggagggcgctccagcacgtggtgccg
gggccgcggctgccggctgggggcgccgggcgcggggcgggggctcgtcctccaagcgcg
gctctgctgtccttctcccgatcctgcgaagccgcgagctccagtattcaggaagtggtg
actcagataggattattccggccccggcttccctttcttccccttcttcctccccacctt
tgtggtgattccacgactgctgagcgtctctgtccagggacagcgagggagcccaaagcc
aagcaaggcaacgtgaaactcactagtgtggtttggcattggttgtgcgacgtgcagttg
ggtgttgtggagaagaattgggcccttcctgttgaccagtgccggctgcaggagttgcag
tttttggtgcatctcatcgatttgctgagcatacttctcagctgtaatggtttccccagg
attcagaaagccgtaatggatcagaccagcagcagcgaccaccagtga

>gi568815581r:67240846_67466519|GENSCAN_predicted_peptide_6|190_aa
MYQTETDQKGEEDWKGYINISKSLSCDRIRRKADKSVVSIRLLQSERMNELLSSFLFQVL
TGFPLHFASVISPLLMLASVSHDMYIAPSLPSKSEAELWAVDSVSDNKALHTAKKHESDY
VTSGFRTLSGSHCKKDISQTPSQAPNAFHALSGLASLGLAQLNSFLALTARRQENYRKQK
RENHSRLRIA

>gi568815581r:67240846_67466519|GENSCAN_predicted_CDS_6|573_bp
atgtaccagacagaaactgaccaaaaaggggaagaagactggaagggctatattaatatc
agtaaaagcctaagctgtgatcggattagaagaaaggctgacaaaagtgttgtttccatc
cgccttttacaatcggagagaatgaatgagctgctttccagttttctgttccaagtatta
actggattcccacttcactttgcttccgtgatttctcctctgcttatgttagcttccgtc
tcacacgatatgtacatagccccatctctgccgagcaaatcagaggctgagctctgggct
gtggacagtgtcagtgacaacaaggctctgcacacagccaagaaacatgaatcagattat
gtcacttctggttttagaactctcagtggctcccattgcaaaaaggacatatcccaaact
cccagccaggccccgaacgctttccacgccctgtccggtctggcttcccttggtctggcc
caactaaattctttcctggcactgactgccaggagacaggaaaactatagaaagcagaag
agggagaaccacagtaggctccgtattgcatga