GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:22:21

Sequence gi568815587r:44164857_44410062 : 245206 bp : 46.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6755   6886  132  1  0   82  103   195 0.976  21.24
 1.02 Intr +  32973  33162  190  2  1   95  116   163 0.806  18.96
 1.03 Intr +  41937  42103  167  1  2   67   94   177 0.973  15.88
 1.04 Intr +  67497  67640  144  2  0  103  116   102 0.997  14.98
 1.05 Intr +  69259  69387  129  0  0   45   97   198 0.999  17.29
 1.06 Intr +  71437  71519   83  0  2   97  107    24 0.997   3.64
 1.07 Term +  79293  79431  139  0  1  107   47   183 0.999  13.54
 1.08 PlyA +  86622  86627    6                               1.05

 2.17 PlyA -  87633  87628    6                               1.05
 2.16 Term - 100327  99998  330  1  0  111   48   482 0.745  41.16
 2.15 Intr - 102766 102638  129  1  0   97  111   193 0.999  23.39
 2.14 Intr - 110802 110492  311  1  2  120   82   450 0.488  43.63
 2.13 Intr - 113967 113942   26  2  2  138   93    15 0.328   4.67
 2.12 Intr - 129032 128965   68  2  2  113   38    13 0.010  -3.50
 2.11 Intr - 129440 129315  126  2  0   73  100     2 0.412   0.78
 2.10 Intr - 131168 131103   66  2  0   93   85   108 0.895  10.10
 2.09 Intr - 135864 135741  124  2  1   68   17    56 0.373  -2.91
 2.08 Intr - 139378 139231  148  2  1   79   94   168 0.822  15.79
 2.07 Intr - 141582 141453  130  0  1   76   77     2 0.590  -1.83
 2.06 Intr - 144545 144234  312  2  0   65   94   196 0.811  14.28
 2.05 Intr - 145273 144700  574  0  1   55    1   629 0.021  43.64
 2.04 Intr - 152290 152035  256  2  1   32   75   159 0.081   5.50
 2.03 Intr - 164032 163931  102  2  0   54   95    26 0.012   0.05
 2.02 Intr - 164327 164303   25  2  1   99   65    11 0.005  -2.50
 2.01 Init - 175811 175434  378  2  0   72   77   187 0.675  10.91
 2.00 Prom - 176581 176542   40                              -3.26

 3.09 PlyA - 176706 176701    6                               1.05
 3.08 Term - 178837 178745   93  1  0   40   49   103 0.617  -0.57
 3.07 Intr - 196071 195957  115  2  1   88   38    59 0.274   1.35
 3.06 Intr - 207107 206935  173  2  2    0  108    98 0.251   1.74
 3.05 Intr - 207546 207519   28  2  1  121   78    12 0.270   1.62
 3.04 Intr - 211646 211587   60  1  0  107   76    47 0.291   3.25
 3.03 Intr - 228032 227381  652  0  1   59   35   238 0.075   6.57
 3.02 Intr - 236916 236778  139  0  1   14   90    78 0.101   0.64
 3.01 Intr - 244577 244373  205  1  1   40   66   126 0.303   4.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:44164857_44410062|GENSCAN_predicted_peptide_1|327_aa
ARWFWEAYFQSIKAIALATLQIINDRIYPYAAISYEEWNDPPAVKWGSVSNPLFLPLIPP
QSQGFTAIVLTYDRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEDSLWPKIRVPLKV
VRTAENKLSNRFFPYDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLH
LWDHEMNKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAM
NFLVANVTGKAVIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLKV
VEHRADPVLYKDDFPEKLKSFPNIGSL

>gi568815587r:44164857_44410062|GENSCAN_predicted_CDS_1|984_bp
gcccggtggttctgggaagcgtacttccagtcaattaaagccattgccctggccaccctg
cagattatcaatgaccggatctatccatatgctgccatctcctatgaagaatggaatgac
cctcctgctgtgaagtggggcagcgtgagcaatccactcttcctcccgctgatcccacca
cagtctcaagggttcaccgccatagtcctcacctacgaccgagtagagagcctcttccgg
gtcatcactgaagtgtccaaggtgcccagtctatccaaactacttgtcgtctggaataat
cagaataaaaaccctccagaagattctctctggcccaaaatccgggttccattaaaagtt
gtgaggactgctgaaaacaagttaagtaaccgtttcttcccttatgatgaaatcgagaca
gaagctgttctggccattgatgatgatatcattatgctgacctctgacgagctgcaattt
ggttatgaggtctggcgggaatttcctgaccggttggtgggttacccgggtcgtctgcat
ctctgggaccatgagatgaataagtggaagtatgagtctgagtggacgaatgaagtgtcc
atggtgctcactggggcagctttttatcacaagtattttaattacctgtatacctacaaa
atgcctggggatatcaagaactgggtagatgctcatatgaactgtgaagatattgccatg
aacttcctggtggccaacgtcacgggaaaagcagttatcaaggtaaccccacgaaagaaa
ttcaagtgtcctgagtgcacagccatagatgggctttcactagaccaaacacacatggtg
gagaggtcagagtgcatcaacaagtttgcttcagtcttcgggaccatgcctctcaaggtg
gtggaacaccgagctgaccctgtcctgtacaaagatgactttcctgagaagctgaagagc
ttccccaacattggcagcttatga

>gi568815587r:44164857_44410062|GENSCAN_predicted_peptide_2|1034_aa
MGVVGGAGTAAMPQLLTPLRPYLPQDAHSRFQAQPSWQQYQGHCPTGKEDPREQKQSLSL
GLEGIDNSPPLPSHTHTLPHPCAEGHILPLNLTAGCCLQAQRFGHLQIAASEPMVAPSLF
SNQEKKIVARKKGEDYVATQVLSLVPISYFDITIQDQFTCGGKCTEAPELRWPPNTVESS
PPGLSSQVFRGSPELLSPPCALGLALAREGGAPGSIAHADFAFRREPQPPRGKAGGRLPK
SRDAEPGSEYAGQSQGARWRPRALARVPARRLRKPGMNAETCVSYCESPAAAMDAYYSPV
SQSREGSSPFRAFPGGDKFGTTFLSAAAKAQGFGDAKSRARYGAGQQDLATPLESGAGAR
GSFNKFQPQPSTPQPQPPPQPQPQQQQPQPQPPAQPHLYLQRGACKTPPDGSLKLQEGSS
GHSAALQVPCYGECTCGSPGAGDHGARSVSAVKLDLEFVFPGPFGISPNRSLCAARWAGF
EADASYRPRACGGKESPRSALALGCGAAGLRGCGAAGLRGCGAAGLRDSRTAEASLLAGW
EAPRAAPPQSPIASRQGRCPGQLSLGQAEGVRGGEAASSLCWPGLDRVAERVAQGSPAIS
TGPHRGDSHRIGKPTLRGPGYVMIPSGGIRVEADRPVVPLDSATPFLPVLNGTLALSHLG
GEYEEDVMMERGSVSAPYILHHQASDQQVTEIQLKDTFVFRDLELLPGPHLQLRKHLVGI
ALGHTWTETFCGNPLGDISILNLKMRKSHPENQASPAQDPHVICGSSSCGSSGTVLAAAK
ESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEKADSESNKGKKRRN
RTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQ
MQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPHAH
PPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASLSPGLNGYELNGEPDRKTSSIAALR
MKAKEHSAAISWAT

>gi568815587r:44164857_44410062|GENSCAN_predicted_CDS_2|3105_bp
atgggggtggtcgggggggcggggacagcagcgatgccccagctgctcacccctctgagg
ccatacctgcctcaagatgcccattccagattccaggctcagcctagctggcagcagtac
cagggtcactgccccactgggaaagaggacccaagggaacaaaaacagagcctgagcctt
ggcctagagggtattgacaacagccccccactcccatcacacacccacacactcccccat
ccatgtgcagagggccacatcttgccactgaatttaactgctggctgctgcctccaggct
cagcgctttggccacctgcagatagctgcttctgagccaatggtggcaccatcactcttc
tccaaccaggagaagaagattgtggccaggaagaaaggagaagattatgtggccacccag
gtattaagcctagtgcccattagttattttgatattaccattcaggatcagtttacctgt
ggaggtaaatgcacagaagctccagaattaaggtggccaccgaacacggtggagagctcg
cctccagggctttcgagccaggttttccgcgggtccccggagctcctctccccgccctgc
gctcttggccttgcccttgccagagagggcggggcaccaggttccatcgcgcacgcggac
ttcgccttcaggcgagaaccccagcccccgcgcggaaaagcgggtggccggctccccaag
agcagagatgcagagcctggaagcgaatatgcagggcaaagccaaggcgcgcggtggcgt
cctcgcgccctcgctcgcgtccccgcccgccgcctgcgcaagccaggcatgaatgctgag
acttgcgtctcttactgcgagtcgccggccgctgccatggacgcctactacagcccggtg
tcgcagagtcgggagggctcgtcgccttttagggcatttcccggaggcgacaagttcggc
acaactttcctgtcggccgccgccaaagcacagggattcggggacgccaagagccgggcc
cgttacggcgctgggcagcaggacctggcgacacccctggagagtggagctggggcgcgg
ggctcctttaacaagttccagccccagccgtcgaccccgcagccccagccgccgccgcag
ccgcagccgcagcagcagcagccgcagccccagccgcccgcgcaaccgcatctttacttg
cagcgaggcgcctgcaagacgcccccggacggcagcctcaaactccaggaaggcagcagc
ggccacagcgcggccttgcaggttccctgctacggtgagtgcacgtgcgggtcacctggt
gctggggaccacggggcacggagcgtttcggctgttaaactcgacttggagtttgttttt
cccggtcccttcggcatttccccaaaccgctcgctttgcgctgcccgctgggcgggattt
gaagcggatgcttcttaccggcccagggcgtgcggcggcaaggagtctccgcgcagcgct
ctggcgctgggctgcggggctgcggggctgcggggctgcggggctgcggggctgcgaggc
tgcggggctgcggggctgcgggacagcaggactgcagaagcctcgctcctcgccggctgg
gaggctcctcgggcggcgccgccgcagagtccaattgcctctcggcaaggaaggtgcccc
gggcagctgagcctgggccaagccgagggagtgcggggcggggaagccgcctccagtctc
tgctggccgggtctggaccgggttgcggaaagagttgcgcagggttctccggccatcagc
acaggtcctcaccgaggtgacagtcatcggattgggaaaccaacactgcgaggacccggc
tatgtgatgataccgtccgggggaattcgagtggaagccgaccgtcctgtggtgccacta
gacagtgccactccatttctccctgtgttgaatggcactttggccctgtcccacctggga
ggggagtatgaggaggatgtgatgatggagagaggtagtgtgtctgccccgtacatcctg
caccaccaggccagtgaccaacaggtcacagaaattcagctcaaggacacatttgttttc
cgggacctggagctgcttcctgggccccatctgcaattaagaaagcacctggtgggcatt
gcccttggccacacctggactgagactttttgtggaaacccactgggagatattagtatc
ctcaatttgaagatgaggaagagccatcctgagaaccaggccagcccagcccaggacccc
catgtgatatgtgggagcagctcctgtgggtcctcagggacagtcctggctgctgctaaa
gagagctccctgggtgagccagagttaccccctgactctgacactgtggggatggacagc
agctacctgagtgtcaaggaggctggggtgaaggggccccaggaccgggccagctcagac
ctccccagcccattggagaaggccgactcagagagcaacaagggcaagaagcggcggaac
cggaccaccttcaccagctaccagctggaggagctggagaaggtcttccagaagacccac
tacccagacgtgtatgcgcgggaacagctggccatgaggacagacctcactgaggcccgc
gtgcaggtctggttccagaaccgaagggccaagtggaggaagcgggagcgttttgggcag
atgcagcaggttcgaacccacttctccactgcatatgagctgcccctcctcacccgagct
gagaactacgcccagattcagaacccgtcctggctcggcaacaacggggctgcctcacca
gtgccagcctgcgtggtcccctgcgacccggtgcctgcctgcatgtcccctcatgcccac
ccccctggctctggggccagcagcgtcaccgacttcctgagtgtgtctggggctggcagt
cacgtgggccagacgcacatgggcagcctgtttggagcagccagcctcagcccaggcctc
aatggctacgagctcaacggcgagccggaccgcaagacctcgagcatcgcggccctccgc
atgaaggccaaggagcacagtgcggccatttcctgggccacatga

>gi568815587r:44164857_44410062|GENSCAN_predicted_peptide_3|488_aa
XTIPNSLVASVGPCAWESIRWPADVSNTPSAYGCHKGVWEQGHVHMKTHGYPEYLGLLLS
SQAKAGDSKHSRHKSRLAEVTRAGQFQALFGCMAWSSGISNVPGKSHTAPRRHTQVLEVL
ARAIWQEKEIKRIQLEKEEVKLSLFADDIIVYLENPIISAQNLLKLISNFSKVSGYKINV
QNSQAFLYTNNRQTKSQIMSELPFAIASKRIKYLRIQLTRDVKDLFKENYKPLLNEIRED
TNKWKNIPCSWIGKINIVKMAILPKVIYRFNVIPIKLPMTFFTELEKTTLKFIWNQKRAC
IAKTILSQKNKAGSITLPDFKLYYKATVTKTAWASPTITRQTRTFLPPGKPSRNERVEYI
SEKSKLTSEELGRHGGGQETGSTFGIGVIGLNQLDPHMLLPLTWCCQIKYKKFELQLNNK
FLPERTMDPWNTLQVLLGQYLSSPGFGLPICAKRRLDKIIIRNQKQSAVPTGDPHPGPLL
PWLLQESD

>gi568815587r:44164857_44410062|GENSCAN_predicted_CDS_3|1467_bp
nngacaatacccaactccctggtggcctctgtgggaccttgtgcatgggaaagcatccgg
tggccagcggatgtctccaacacgccaagtgcctatgggtgccacaaaggggtttgggag
cagggtcatgtccacatgaagacccatgggtaccccgagtatttggggctgctactgtcc
tctcaggccaaagctggggacagtaagcactcccggcacaagtccagactggcagaagta
acccgtgcagggcagttccaggccctttttggctgtatggcttggtcaagtgggatcagc
aatgttcctgggaaatcccacactgcaccaagaaggcacacgcaagtgttggaagttctg
gccagggcaatctggcaggagaaagaaataaagcgtattcaattagaaaaagaggaagtc
aaattgtccctgtttgcagatgacataattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaattcacaagcattcctatacaccaataacagacaaacaaagagtcaaatcatgagt
gaactcccattcgcaattgcttcaaagagaataaaatacctaagaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataagagaggac
acaaacaaatggaagaacattccatgctcatggataggaaaaatcaatattgtgaaaatg
gccatactgcccaaggtaatttatagattcaatgtcatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactaccttaaagttcatatggaaccaaaaaagagcctgc
attgccaagacaatcctaagccaaaagaacaaagctggaagcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatgggcctctccaaccatcacccga
caaacaaggaccttcttacccccaggaaaaccctccaggaatgaaagagttgagtacatc
tcagagaagagcaagctaacctctgaggagcttgggaggcatggagggggccaggagact
ggtagcacctttgggatcggggtcatcggcctgaatcagttggacccccacatgctcctt
ccccttacctggtgttgccagataaagtacaagaagtttgaattacagctgaataacaag
tttcttccagaaaggaccatggacccctggaacactctccaggtcttgcttgggcagtac
ctttcctctccaggctttggtttacccatctgtgccaaaaggcgattggataagatcatc
atcaggaatcagaagcagtcagctgtgcccactggggaccctcacccaggacccctgctg
ccctggctgctgcaggaatcagactga