Result of FASTA (omim) for pF1KA1462
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1462, 1359 aa
  1>>>pF1KA1462 1359 - 1359 aa - 1359 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.0727+/-0.000403; mu= -9.0794+/- 0.025
 mean_var=338.2834+/-70.138, 0's: 0 Z-trim(121.9): 14  B-trim: 166 in 1/58
 Lambda= 0.069732
 statistics sampled from 39050 (39081) to 39050 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.458), width:  16
 Scan time: 21.380

The best scores are:                                      opt bits E(85289)
XP_011517910 (OMIM: 614398) PREDICTED: junctional  (1359) 9377 958.3       0
NP_065899 (OMIM: 614398) junctional protein associ (1359) 9377 958.3       0
XP_011517911 (OMIM: 614398) PREDICTED: junctional  (1221) 8427 862.7       0


>>XP_011517910 (OMIM: 614398) PREDICTED: junctional prot  (1359 aa)
 initn: 9377 init1: 9377 opt: 9377  Z-score: 5111.9  bits: 958.3 E(85289):    0
Smith-Waterman score: 9377; 99.9% identity (99.9% similar) in 1359 aa overlap (1-1359:1-1359)

               10        20        30        40        50        60
pF1KA1 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKGHLE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
XP_011 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA1 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA1 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA1 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA1 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
             1270      1280      1290      1300      1310      1320

             1330      1340      1350         
pF1KA1 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
       :::::::::::::::::::::::::::::::::::::::
XP_011 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
             1330      1340      1350         

>>NP_065899 (OMIM: 614398) junctional protein associated  (1359 aa)
 initn: 9377 init1: 9377 opt: 9377  Z-score: 5111.9  bits: 958.3 E(85289):    0
Smith-Waterman score: 9377; 99.9% identity (99.9% similar) in 1359 aa overlap (1-1359:1-1359)

               10        20        30        40        50        60
pF1KA1 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKGHLE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
NP_065 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA1 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA1 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA1 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA1 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
             1270      1280      1290      1300      1310      1320

             1330      1340      1350         
pF1KA1 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
       :::::::::::::::::::::::::::::::::::::::
NP_065 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
             1330      1340      1350         

>>XP_011517911 (OMIM: 614398) PREDICTED: junctional prot  (1221 aa)
 initn: 8427 init1: 8427 opt: 8427  Z-score: 4596.1  bits: 862.7 E(85289):    0
Smith-Waterman score: 8427; 99.9% identity (99.9% similar) in 1221 aa overlap (139-1359:1-1221)

      110       120       130       140       150       160        
pF1KA1 TGNDQAYRRRGRQEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPV
                                     ::::::::::::::::::::::::::::::
XP_011                               MAQAHSLPVHVREGPWEVGGRSEHVMKKPV
                                             10        20        30

      170       180       190       200       210       220        
pF1KA1 WEEELRMSGPAKWQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WEEELRMSGPAKWQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGK
               40        50        60        70        80        90

      230       240       250       260       270       280        
pF1KA1 SRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPK
              100       110       120       130       140       150

      290       300       310       320       330       340        
pF1KA1 FGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRS
              160       170       180       190       200       210

      350       360       370       380       390       400        
pF1KA1 PPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLP
              220       230       240       250       260       270

      410       420       430       440       450       460        
pF1KA1 AHPRPVTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHPRPVTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGM
              280       290       300       310       320       330

      470       480       490       500       510       520        
pF1KA1 QPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPD
              340       350       360       370       380       390

      530       540       550       560       570       580        
pF1KA1 VRGSQHGHTGRQVSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRGSQHGHTGRQVSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVK
              400       410       420       430       440       450

      590       600       610       620       630       640        
pF1KA1 SESHLPDRDMDNNDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SESHLPDRDMDNNDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQ
              460       470       480       490       500       510

      650       660       670       680       690       700        
pF1KA1 KQDLGEPEEDRQTNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQDLGEPEEDRQTNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGA
              520       530       540       550       560       570

      710       720       730       740       750       760        
pF1KA1 KLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTS
              580       590       600       610       620       630

      770       780       790       800       810       820        
pF1KA1 LSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRP
              640       650       660       670       680       690

      830       840       850       860       870       880        
pF1KA1 WDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEM
              700       710       720       730       740       750

      890       900       910       920       930       940        
pF1KA1 RVEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSA
              760       770       780       790       800       810

      950       960       970       980       990      1000        
pF1KA1 DGSTSAEKGHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSA
       :::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSA
              820       830       840       850       860       870

     1010      1020      1030      1040      1050      1060        
pF1KA1 FSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSL
              880       890       900       910       920       930

     1070      1080      1090      1100      1110      1120        
pF1KA1 GEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEEL
              940       950       960       970       980       990

     1130      1140      1150      1160      1170      1180        
pF1KA1 LSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPV
             1000      1010      1020      1030      1040      1050

     1190      1200      1210      1220      1230      1240        
pF1KA1 PEPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLA
             1060      1070      1080      1090      1100      1110

     1250      1260      1270      1280      1290      1300        
pF1KA1 SPPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSG
             1120      1130      1140      1150      1160      1170

     1310      1320      1330      1340      1350         
pF1KA1 DRAQRLGHSLSVSKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRAQRLGHSLSVSKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
             1180      1190      1200      1210      1220 




1359 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 11:08:22 2016 done: Thu Nov  3 11:08:25 2016
 Total Scan time: 21.380 Total Display time:  0.200

Function used was FASTA [36.3.4 Apr, 2011]
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