GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:08:48

Sequence gi568815588r:29926103_30147812 : 221710 bp : 44.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13620  13725  106  2  1   72   78    62 0.087   3.39
 1.02 Intr +  37145  37249  105  0  0   76   74   100 0.155   7.59
 1.03 Term +  43180  43256   77  2  2   62   52    94 0.540   1.20
 1.04 PlyA +  44399  44404    6                               1.05

 2.04 PlyA -  44832  44827    6                               1.05
 2.03 Term -  67162  67046  117  1  0   98   54    49 0.552   1.04
 2.02 Intr -  67423  67329   95  2  2   74   35    78 0.299   0.78
 2.01 Init -  81239  81140  100  2  1   41   72   102 0.297   4.32
 2.00 Prom -  81345  81306   40                              -3.46

 3.04 PlyA -  83510  83505    6                               1.05
 3.03 Term -  91815  91781   35  1  2  126   45    25 0.402  -0.25
 3.02 Intr - 103764 100001 3764  2  2  136   94  1761 0.925 168.90
 3.01 Init - 121710 121430  281  0  2   79   98   181 0.832  14.69
 3.00 Prom - 128230 128191   40                              -3.86

 4.04 PlyA - 130073 130068    6                               1.05
 4.03 Term - 132083 132046   38  0  2  105   46    49 0.817  -0.10
 4.02 Intr - 132978 132845  134  2  2   77   52   107 0.819   6.29
 4.01 Init - 133480 133380  101  1  2   66  123   115 0.944  10.54
 4.00 Prom - 164033 163994   40                              -5.26

 5.06 PlyA - 165338 165333    6                               1.05
 5.05 Term - 166530 166474   57  0  0   94   44   105 0.854   4.39
 5.04 Intr - 176928 176894   35  1  2   89   99    -9 0.001  -1.76
 5.03 Intr - 184153 183997  157  1  1   35   78   127 0.110   5.98
 5.02 Intr - 185874 185830   45  0  0   45  101    45 0.056   0.11
 5.01 Init - 220997 220839  159  2  0   58   75   130 0.957   8.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  18890  18951   62  1  2   79   78    77 0.849   6.52
S.002 Term +  21321  21531  211  0  1   85   53    81 0.806   1.07
S.003 Init +  50045  50052    8  1  2  111  111    11 0.801   5.42
S.004 Init + 171875 171944   70  1  1   74   92    49 0.982   5.11
S.005 Term + 172130 172242  113  0  2  126   48    63 0.984   4.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:29926103_30147812|GENSCAN_predicted_peptide_1|95_aa
VINLTLNLHFHYYDLNVCVSPKFPEILNLKVMVLGGCSHSVLPPCEEDACFSFAFCHDYK
FPEASAAIRNCTLQILLKPSGLDINTVQMRRAESA

>gi568815588r:29926103_30147812|GENSCAN_predicted_CDS_1|288_bp
gtcataaatctaacactcaacttgcatttccactactatgatctgaatgtctgtgtctcc
ccaaaattccctgaaattctaaacctcaaggtgatggtattaggaggttgttctcactct
gtcctgccgccctgtgaagaagatgcctgcttctcctttgccttctgccatgattataag
tttcctgaggcctctgcagcaattcggaactgcacactgcagatcctgctgaagccatct
ggcctggacattaacacagtgcagatgcggcgtgcagagagtgcctga

>gi568815588r:29926103_30147812|GENSCAN_predicted_peptide_2|103_aa
MKDIRGKIVSKEKVHAVQINMAANILKDVDYPLALPRKSARDLASLGLLRFSELAPVGPH
LSDNERPLMVDRPQHGPGQIVRHREVTCHLPTVRTMMADTTRS

>gi568815588r:29926103_30147812|GENSCAN_predicted_CDS_2|312_bp
atgaaagatatcaggggcaaaattgtgtccaaggagaaagttcatgcagtacaaattaac
atggcagcaaatattctgaaggatgtagactatcccctcgccttgcctcgtaaatcagcc
cgcgacctcgcctccctggggctgctgcgcttctctgaactcgctccagtgggtccacat
ctttctgataatgagaggcccttgatggtggacagaccccagcacggccctggacagatt
gtgaggcacagagaagtcacctgccacctccccaccgtcagaacaatgatggcagacacc
accaggtcctga

>gi568815588r:29926103_30147812|GENSCAN_predicted_peptide_3|1359_aa
MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE
VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV

>gi568815588r:29926103_30147812|GENSCAN_predicted_CDS_3|4080_bp
atgtacagtgtagaagacctcctgatctctcatggatacaagctgtcaagagacccccca
gcatcacgcgaggataaccccaaggggcgccaggcagcgaggactgggacacgagcaggc
cagggcctgcagaacgggcatgaggatggccctgcggccctcgcacatcgtaagacgtcc
gcggggaaaggacatgtgagtgactccgaaagccgccgcagcacaccgagaggccacggg
gagccccagagcacttctgcttccagaacctcggaggcggggttttgtaatcaacccccc
tcagcatggtcctctcatcccccgactggtaacgaccaagcctaccggagaagaggacgg
caagaagccaggagccagaagccgagggagcacgaaaacctggaggccagaggaatggcc
caagcccacagcctgcctgtccacgtgagggagggtccatgggaagttggaggaaggtca
gagcatgtgatgaagaagccagtttgggaagaagaattgcgaatgtcaggtcctgccaag
tggcagaacgtcagcctggaaagctggaaccagccaaggaaattagggaggcagatgtct
gatggagatggggagagactgtttcaagacctgtacccattcattcaaggagaacatgtg
ttgaattctcaaaacaaagggaagtctcgctcactgcctagagttctttcccccgagagc
ctgagttgcacggaaattcccattccattaaatgaaagacattcacctaaaatgccaccg
tatcctcccacttgcgcaccaaatttggactccacgaggaattctgagaagagtggctgc
tcagccccatttccccggcctaagtttgggaggcccctcaagcccccatcttacagctcg
caccagcagtctaggggaggagcggacagcagtgactctcaggacagccagcagatggac
gcctatgtccccaggcatgagctctgcctgtcagaccctggattggaacctccagtgtac
gtgcctccgccctcatacagatcgcccccgcagaacatcccaaacccctacttggaagac
acggtgcccataaatgtgtgtggcggtcacagtcaacagcagtctccgaccgagaaggct
ggggccagcggtcagcctccttcaggcccccctggaactgggaatgagtatggtgtgagc
ccccgcttgcctcaggggctccccgcacatccccgacctgtcactgcctatgacggcttc
gttcagtacattccctttgatgatccacggttacgacattttaaactagctcagccccag
ggtttctgtgaagacataaagcttgacgataaatcatataactccagtcctgtcactgct
caagagccggctcatggaggaatgcagcctgatggtgccatttggaatccacagagctta
atacccccgtcgggggatgagagaggcctggtcttggccgattccagcccccggtggctg
tggggccagccccccggggatggggaaaacagtggcctccccaaccagagagaccgctgt
gtggcaaggggacagtggcctgatgtgagaggcagccagcacgggcacactggaagacaa
gtttcctccccttactcacagggcgagagcacctgcgaaactcaaaccaagctcaaaaag
ttccaaactgggactcggaccaagaaaagttcaaagaaaaaaatgaacgagactatattt
tgcttggtttctatcccagtgaaatcagaatcacatctgccagatagagatatggacaac
aatgacttaaagcccagtgctgatcaaaagaatgggtctgataagagcccggctctgcaa
gaacagagtctgctgagcatgtcttccaccgacctggagctgcaggccctcacaggaagc
atgggtgggagaacggagttccaaaaacaagatctaggggaaccagaagaagacagacaa
acaaatgacctcagtttcatccaccttacaaagcacagagaactcaagcattctggctct
tggccagggcaccggtacagagatcagcaaacacaaaccagtttctccgaggagccccaa
agttcgcagctgctccctggtgcaaagctgggagggccgagtcgtgcagcattgagtcca
aaatgttcagaccctgctgcctccgaagctcagacgcacacagcattccctaccggtgat
cacaaacagaggccaagtgcccgtaacctgaaaggtcacaggtccctcagcccatccagc
aacagtgcgttctcaaggacttccttgtccgtggaccaggcaccgacgccaaaagcaggc
cgaagtcagccctgcgtggatgtccacgggcttggagcccaccctgggcctaagcgggag
gtggtgaagggggagcccacgggcccttgcaacagtaaacaactctttgggcagtttctc
ctgaaaccggtcagccgtcgtccctgggatttgatcagtcagttagaaagttttaacaag
gagctccaggaagaggaagaaagcagcagtagcagcagcagcagcagcagcagcagtgag
gagagtgaggcggagccgcagcaggagaaccgtgctcactgcagacaggaggatgtgggc
ttccgcggaaacagcccggaaatgagggttgagccacagccgaggatgtgggtgccggag
agccctgtgtgtaggtcgggaagaggtgagagtaagtctgagagctggagtgaggagctg
cagcctggccacccacgtgcctggcctccatccccgggccgctttcgcgtggaagaaggt
ggcggtgcacctttctgctcagcagatggaagcacgagtgcagagaagagacacctggag
gttagcaacggaatggacgagctggcaggtagcccatttcctgtgacgagaatgtcttca
agatcaagtgacgcaaaaccactgcccgcgtcctatccagctgaacctagggagccccag
gaaagtccgaaaatcaccagtgctttcagctctgtgaaaccaagtgaagcggtccctcgg
aagtttgacagtggtggagagaggggggcagggctcccactgtccctgtctaacaagaac
cgagggctctcagctccagacttacggtctgtggggctcacccctgggcaagaacagggt
gccagtgagctagaggggtctttgggtgaagcaagcacaatagaaatccccccaggtgag
tccttgcaagccagggctgcaaggatcctgggcattgaggtggcggtggagtccctcctg
ccgggcatccggagagcgggacagaaccagcctgctgagcccgatgcaagtgcctgcacc
ccagagtccccccaggaagagttgctatctcgcccagcaccggcagatgtccccagggtg
tccactgatgccttttatggcaggaggaagtgcggctggaccaagagccctctctttgta
ggggacagggacagtgccaggcgggctcctcaggcttttgagcactcagatgtggacggg
gttgtcaccagcacagaccctgtccctgagcctgagcccagccccttggagtccaagttc
ttcgaacaaaaggatgtggaaacaaaaccacccttcaggtccactttattccattttgta
gaaagaaccccaagtgtggcaggctctgaaaagagacttagaagcccttccaaagtgatt
gaaagtttacaagagaaactggcctccccgcctaggagagcagaccctgaccgcctgatg
agaatgaaagaggtgagctcagtgtcacggatgagagtcctgagcttcaggaatgccgac
tcccaggaggacgccgaggaattgaaggccaccacaaggggccaggccgggctcccggga
ggccttgtgtctcctggcagtggggaccgtgcccagagattgggccactcactctctgtg
tccaaggacagcatctccagggaagagaaggagcatccggcagcacaaaaggagaagagc
atggatcaagacttctggtgcccagattcctatgaccctagcagagtggagagggtgtga

>gi568815588r:29926103_30147812|GENSCAN_predicted_peptide_4|90_aa
MLGLGGCRRGGSRWSPAGRSGGGGGARRHEGAARLCPPTPPAPSRPDLADLTPELTAAAL
GPRGPSSHAAPAVWTARDDLQGIDNPEIEG

>gi568815588r:29926103_30147812|GENSCAN_predicted_CDS_4|273_bp
atgctcggcctcggcggctgcaggcggggcgggtcgcgctggtccccggccggccggagc
ggcggcggtggcggcgcgaggcggcatgagggagccgctcgcctgtgtccaccaacccct
cccgcgccctcgcgcccagatctcgcggacctcaccccagagctgacagccgccgcgctg
ggtccccgaggtcccagttcccacgctgccccggccgtctggactgcccgggacgattta
caaggaatagataacccagagattgagggctag

>gi568815588r:29926103_30147812|GENSCAN_predicted_peptide_5|150_aa
MLNITNYQRNANQNHNAIPPYSSKNSPNQKIKKKVNVGVNAVKREHFYTVIGNLFGGIYL
GVELLDHMGSIHQEVHTSAGPYINGPYISRSIHQRVHTSAAHISWSIHQRGVYTSSGRYI
SPIVPMCHGRDLEGESFFVEDSKRLIVWAA

>gi568815588r:29926103_30147812|GENSCAN_predicted_CDS_5|453_bp
atgctcaacatcactaattatcagagaaatgcaaatcaaaaccacaatgcgataccacct
tactccagcaagaacagccctaatcaaaaaatcaaaaagaaagtaaatgttggcgtgaat
gccgtgaaaagggaacacttttacactgttatcgggaatctctttgggggcatctacctg
ggagtggaattgctggatcatatggggtccatacatcaggaggttcacacatcagctgga
ccatacatcaatggtccatacatcagcaggtccatacatcagcgggtccatacatcagct
gcacacatcagctggtctatacatcagcggggagtctatacatcatctggtcgatacata
agtcccatagttcccatgtgtcatgggagggacctggaaggagaaagcttctttgtggaa
gactctaagcgactcatcgtgtgggctgcctga