GENSCAN 1.0	Date run:  3-Nov-116	Time: 10:39:41

Sequence gi568815585r:72659798_72881832 : 222035 bp : 37.08% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  20504  20567   64  1  1   48  100    52 0.572   3.76
 1.02 Intr +  23163  23302  140  1  2   54   64    81 0.474   1.56
 1.03 Term +  30757  30858  102  0  0  126   43   134 0.986  10.00
 1.04 PlyA +  31442  31447    6                              -0.45

 2.00 Prom +  32293  32332   40                              -4.95
 2.01 Sngl +  33084  33446  363  2  0   55   41   217 0.614   9.53
 2.02 PlyA +  36136  36141    6                               1.05

 3.00 Prom +  42500  42539   40                              -4.05
 3.01 Sngl +  43960  44184  225  0  0   97   47   125 0.607   4.19
 3.02 PlyA +  44355  44360    6                               1.05

 4.05 PlyA -  45713  45708    6                               1.05
 4.04 Term -  55300  55135  166  0  1   79   50    99 0.426   1.61
 4.03 Intr -  55882  55755  128  1  2   53   62   103 0.639   2.76
 4.02 Intr -  59300  59155  146  0  2  100   53   124 0.636   9.18
 4.01 Init -  67805  67727   79  2  1   92  113   179 0.994  20.07
 4.00 Prom -  68900  68861   40                             -10.45

 5.00 Prom +  68963  69002   40                             -10.94
 5.01 Init +  69144  69296  153  2  0   34  100    80 0.040   3.83
 5.02 Intr +  71484  71590  107  2  2   57  123    81 0.924   6.59
 5.03 Intr +  75163  75208   46  1  1   71   78    57 0.612   0.49
 5.04 Intr +  78165  78246   82  2  1   60   82    52 0.100   0.09
 5.05 Intr +  85184  85410  227  0  2   46   89    97 0.372   2.38
 5.06 Intr +  86147  86279  133  1  1   64   91    42 0.836   1.40
 5.07 Intr +  86704  87314  611  2  2  109  110   519 0.958  47.41
 5.08 Intr +  93893  94024  132  1  0   97  102    61 0.474   8.32
 5.09 Term +  95246  95272   27  1  0   74   39    22 0.198  -7.00
 5.10 PlyA +  95504  95509    6                              -0.45

 6.19 PlyA -  95625  95620    6                               1.05
 6.18 Term -  97138  96776  363  1  0   61   55   176 0.520   5.18
 6.17 Intr - 100854 100732  123  0  0    9  110    72 0.576   1.36
 6.16 Intr - 101724 101566  159  0  0   62   80    84 0.938   4.26
 6.15 Intr - 102017 101849  169  1  1   81   68   153 0.991  11.63
 6.14 Intr - 102340 102126  215  1  2  112   63   107 0.999   7.19
 6.13 Intr - 103810 103654  157  0  1   85   86   109 0.999   9.49
 6.12 Intr - 106261 106175   87  0  0   84   58    93 0.941   4.07
 6.11 Intr - 109115 108988  128  2  2   81   38   162 0.997   9.06
 6.10 Intr - 112099 111998  102  1  0   76   94    75 0.987   6.35
 6.09 Intr - 112478 112362  117  2  0   91   51   104 0.991   6.74
 6.08 Intr - 113042 112896  147  2  0   66  115    76 0.992   7.61
 6.07 Intr - 114024 113887  138  0  0   30   75   128 0.977   5.44
 6.06 Intr - 114262 114149  114  1  0   62  105    21 0.650   0.92
 6.05 Intr - 115578 115414  165  0  0   79   60   237 0.931  19.24
 6.04 Intr - 117696 117623   74  1  2   63   63    61 0.885  -0.69
 6.03 Intr - 118583 118390  194  1  2   81   89   170 0.999  14.61
 6.02 Intr - 121206 121049  158  0  2   16   63   166 0.965   4.79
 6.01 Init - 121987 121808  180  1  0   84   96   173 0.925  15.00
 6.00 Prom - 122680 122641   40                             -10.55

 7.00 Prom + 123526 123565   40                              -9.25
 7.01 Init + 123673 123924  252  0  0   49  116   202 0.995  16.49
 7.02 Intr + 132650 132750  101  1  2   52  110    97 0.993   6.29
 7.03 Intr + 135562 135760  199  1  1   46   84   218 0.999  15.63
 7.04 Intr + 138110 138229  120  1  0   51   68   123 0.649   6.37
 7.05 Intr + 162052 162185  134  0  2   70  107   169 0.987  15.52
 7.06 Intr + 167213 167321  109  2  1   63   99    47 0.978   2.67
 7.07 Intr + 167936 168093  158  1  2   55    5   193 0.022   5.59
 7.08 Intr + 175446 175571  126  0  0   80   98   174 0.059  16.47
 7.09 Intr + 194260 194358   99  1  0   38  115   180 0.711  14.01
 7.10 Term + 209520 209556   37  0  1   93   37    50 0.230  -3.77
 7.11 PlyA + 209826 209831    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  68046  68210  165  2  0   51   94   123 0.891   8.90
S.002 Intr +  69129  69296  168  2  0   72  100    72 0.910   6.02
S.003 Init - 123204 123186   19  0  1   78  102   -13 0.918  -0.67
S.004 Term + 167936 168148  213  1  0   55   37   200 0.918   7.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_1|101_aa
MTVTKYFTDCLRKVIRDDGGEGETPLLVSFRRSAFKLIPQGYLSSPRGPSSPRISLLHVD
SSEHSESQALNRVDDDTRIEEDNLPYPVRQFKCQPYLETLS

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_1|306_bp
atgacagttactaaatatttcactgactgtctcaggaaagttattagagatgatggagga
gaaggggagaccccactgttggtcagcttcagaagatctgctttcaagctcattccccag
ggctacctcagttctccacgtggcccctcatctcccaggatctctcttctccatgtggac
tcttcagagcatagtgagagccaggccctcaatagagtggatgatgacacccgcattgag
gaggacaatctaccttacccagtccgccaattcaaatgtcaaccttatttggaaacactt
tcatag

>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_2|120_aa
MADKEKAFWGEEFKLAVKQVLATEICITKREPTANSQENGENVWKAFWRFKWQPLPSQAL
RSRRKEWFCGPDPGPHCPAQPWEIAPCILTPWLDLWLKVPGYSSGCCFRGCELFALTASM

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_2|363_bp
atggcagataaagaaaaagctttctggggagaggaattcaagctggctgtgaagcaagta
cttgctacagaaatctgcataactaaaagagagccaactgctaatagccaagagaatggg
gaaaatgtctggaaggcattttggagatttaagtggcagcccctcccatcacaggccctg
aggtctaggaggaaagaatggttttgtgggccagacccagggcctcactgccctgcgcag
ccttgggaaattgctccctgcatcctgaccccttggctcgatttgtggctcaaagttccc
ggatacagctcaggctgctgcttcagagggtgtgagctcttcgccttgacggcttccatg
tga

>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_3|74_aa
MELSLWPRICEIYKKGDIVDIKGMVTLQVLPWRNWKSLQRYPAGCWQCCQQVKGKILAKR
TKNTLSTLRVETAS

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_3|225_bp
atggagttgtccctttggccacgtatatgcgaaatctacaagaaaggtgatattgtagac
atcaagggaatggttactcttcaggtgttaccatggcgaaactggaagagtctacaacgt
tatccagcaggctgctggcagtgttgtcaacaagttaagggcaagattcttgccaagaga
actaagaacacattaagtactctaagagttgagacagcttcttga

>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_4|172_aa
MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLSICVRLCEQGINPEAL
SSVIKELRKATEALKRVQHQEDGAKPFMRDEFSQLPPGPTSNIGDYNGDYNIGNYISRVK
PPWLLSWAGIVECLQLFKAQGTSCQWIYHSGVGERWPSSHSSIRQFPSEDIV

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_4|519_bp
atggcgagtagcagcggtgctggggcggcggcggcggccgcggcggcgaatctgaatgcg
gtgcgggagaccatggacgttctgcttgagatttcaagaattttgaatactggcttagat
atggaaactctgtctatttgtgtacggctttgtgaacaaggaattaacccagaagcttta
tcatcggttattaaggagcttcgcaaggctactgaagcactgaagcgagtacagcaccaa
gaggatggtgctaaaccattcatgagggatgaattcagtcaactcccaccaggccccacc
tccaacattggagattacaatggagattacaacattggaaattacatttcaagggttaag
cccccatggctgctttcgtgggctggcattgttgagtgtctgcagcttttcaaggctcag
ggtacaagctgtcagtggatctaccattctggggttggagaacggtggccctcttctcac
agctccattcggcagttccccagtgaggacattgtgtag

>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_5|505_aa
MGDVKESKMQITPETPGRIPVLNPFESPSDYSNLHEQTLASPSVFKSTKLPTPGKFRWSI
DQLAVINPVEIDPEDIHRQALYLSHSRIDKDVEDKRQKAIEEFFTKDVIVPSPWTDHEGK
QLSQCHSSKCDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPSASPGSPHSGVQ
TSLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPSPISSPTFSPIE
FQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNWSPMRLQMYSGG
TQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSNEASTHGTHLVV
TAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKEPVDNGSLPMTD
FVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMDTVGAESYCKES
DAQTCEVESKSQAFNMKSSAKETCF

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_5|1518_bp
atgggagatgtcaaggaatcaaagatgcaaataacaccagaaactccaggaaggatccct
gttttaaatccttttgaaagtcctagtgattattctaatctccatgaacaaactctcgcc
agtccttctgtttttaaatcaacaaaattaccaactccagggaaatttagatggtctatt
gatcaactagctgtaataaatcctgtagaaatagacccagaagatattcatcgtcaagct
ttatacttaagtcattctcgaatagataaagatgtggaagacaaaagacaaaaagccatt
gaagagtttttcactaaagatgtcatcgtaccctctccttggactgatcatgaagggaaa
cagctttcacaatgtcattccagtaaatgtgactattttagagctgatgaatttgcagat
caatctcctggaaacctcagttcttcatccctcagaagaaagctgtttttagatgggaac
ggaagcatctccgactccttaccttcggcttctcccggaagtcctcacagtggtgttcaa
acatcactagagatgttttattcaatagatttgtctcctgtaaagtgtaggagccccttg
cagacaccaagttcggggcagttttcttctagccctattcaggctagtgcaaaaaaatac
agcttgggaagcataactagtccttcgcctatttcttcacccactttctcaccaattgaa
tttcagataggagagactccactctcagaacaaaggaagtttactgttcattctcctgat
gcttcatctggaacaaattctaatgggataactaatccgtgtatcagaagtccttatata
gatggctgctcgccaattaaaaattggtctcctatgagacttcagatgtatagtggtggt
actcagtatcggacctcagtgattcagataccttttactcttgagactcaaggtgaagat
gaggaagataaagagaatattccttccacagatgtctcatcacccgccatggatgctgct
ggaatacacctacggcagtttagtaatgaggcttctacccatggtacacatttggttgtg
actgccatgtctgttacacaaaatcagtccagtgcttctgagaaagaattagcactgttg
caggatgttgaaagggagaaagacaataacactgtggatatggttgatcctatagagata
gcagatgagaccacttggattaaggagccggttgataatggcagtttacccatgactgat
tttgtaagtggcattgccttcagtattgaaaactctcatatgtgcatgtcacctcttgct
gaaagcagtgtcattccttgtgaaagcagtaacattcagatggatagtggctataatacg
cagaattgtggaagcaatattatggatacagttggggcagaaagttactgcaaagaaagt
gatgcacaaacatgtgaagttgagagtaaatctcaagcatttaatatgaagagttcagct
aaagaaacgtgcttttag

>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_6|929_aa
MKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVCPQPHYLLPDTNVLLHQ
IDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQE
QGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEE
YVKSLTANPELIDRLACLSEEGIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVVLHD
EGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHL
FTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEV
LLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDALHC
RELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKASLTYAEAQLRIDSANM
NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSM
VEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLA
ESLDQAESPTFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRY
ADVIVHRLLAVAIGADCTYPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKS
KGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFH
VFDKVKVKIMLDSSNLQHQKIRMSLVEPQMRKWRFMVCSHTATKKYPKLGNYYKGKRFNG
LSSALLVRPQDTYTIMAEKGEAGTFFTGRQDENDCQQWKCQTLIKPSDLMRPAHYHRNSM
EETAPMIQLPPPGPTLDTWGLLQFKVRFG

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_6|2790_bp
atgaagatcgtgcgcgagcactacctgcgagacgacatcggctgcggtgcgcccgggtgc
gcagcgtgtggaggggcgcacgaggggccggccctggagccgcagccccaggacccggcg
agcagcgtctgcccgcaaccgcactacttgctgcccgacactaatgtgttactgcaccag
attgatgttcttgaggaccctgccatcaggaatgtaattgtgctacaaacagttcttcaa
gaagtgagaaatcgcagtgcccccgtatataaacgcatccgagatgtgactaataaccaa
gagaagcatttctatactttcactaatgagcaccatagagaaacctatgtagaacaagaa
cagggagaaaatgctaatgacaggaatgatagagcgattcgagtagcagcaaaatggtac
aatgaacatttgaaaaaaatgtcagcagacaaccagctgcaagttatcttcataacaaat
gacaggagaaacaaagagaaagccatagaagaaggaataccagctttcacttgtgaagaa
tatgtaaagagcctaactgctaaccccgaactcatagatcgtcttgcttgtttgtctgaa
gaagggataatcttacagggacttaaacatttaaacagagctgttcacgaagatattgtg
gctgtggagcttctccccaagagtcagtgggtagcaccatcttctgtggttttacatgat
gaaggtcaaaatgaagaagatgtggagaaagaagaagagacagaacgaatgcttaagact
gctgtaagcgagaaaatgttgaagcctacaggtagagttgtaggaataataaaaaggaat
tggagaccatattgtggcatgctttccaagtctgacattaaggagtcaagaagacatctc
tttacacctgctgataagagaatccctcgaattcgcatagaaaccagacaggcttccaca
ttagaaggacggagaattattgttgctattgatggttggcccagaaattccagatatcca
aatggacactttgtgagaaatttaggtgatgttggagagaaagagactgaaacagaagtt
ttgttacttgaacacgatgttccccatcagcctttttcacaggctgttcttagttttctg
ccaaagatgccctggagcattactgaaaaggacatgaaaaaccgagaagacctgaggcat
ctgtgtatttgtagtgtagacccaccaggatgtactgatatagacgatgctctacattgt
cgagaactcgaaaatggaaatttggaggttggtgttcatattgctgatgtgagccatttt
attaggccaggaaatgccttggatcaagaatcagccagaagaggaacaactgtgtatctt
tgtgaaaaggcatctctgacgtatgctgaagctcagttgagaattgattcagcaaacatg
aatgatgatattaccactagtctccgtggactgaataaactagccaaaattctgaagaaa
agaaggattgaaaaaggggctttgactctatcctctcctgaagttcgattccacatggac
agtgaaactcacgatcctatagatctgcagaccaaggaacttagggaaacaaattccatg
gttgaagaatttatgttacttgccaatatttctgttgcaaaaaaaattcatgaggaattt
tctgaacatgctctgcttcgaaaacatcctgctccacctccatcaaattatgaaattctt
gttaaggcagccaggtcaaggaatttggaaattaagactgatacagccaagtctttggct
gagtctttggatcaggccgaatctcctacttttccatatctaaacactctgttgagaata
ttagccactcgctgtatgatgcaagctgtgtacttctgttctggaatggataatgatttt
catcactatggcttagcgtctccaatatacacacattttacttcacccattagaagatac
gcagatgtcattgttcatcggcttttggctgtggctattggggctgactgtacttatcca
gagttgacagacaaacacaagcttgcagatatatgtaaaaatctaaatttccggcacaaa
atggctcaatatgcccaacgtgcatcagtggcttttcatacccagttattcttcaaaagc
aaaggaatagtaagtgaagaagcctatattttatttgtaagaaagaatgccattgtggta
ttaattccaaagtatggtttagaagggacagtcttttttgaagaaaaggacaaaccaaac
ccacagcttatttatgatgatgagataccctcacttaaaatagaagatacagtgttccat
gtatttgataaagttaaagtgaaaatcatgttagactcatctaatcttcaacatcagaag
atccgaatgtccctggtagaaccacagatgagaaaatggaggtttatggtctgttctcac
actgctacgaagaaataccccaaactgggtaattattataaaggaaagaggtttaatgga
ctcagttccgcattgctggtgaggcctcaggacacttacacaatcatggcagaaaaagga
gaagcaggcacctttttcacagggcggcaggatgaaaatgactgccagcagtggaaatgc
cagacgcttataaaaccttcagatctcatgagaccggctcactatcacaggaacagcatg
gaggaaaccgcccccatgatccagttacctccacctggtcccacccttgacacgtgggga
ttgctacaattcaaggttagatttgggtga

>gi568815585r:72659798_72881832|GENSCAN_predicted_peptide_7|444_aa
MSRKISKESKKVNISSSLESEDISLETTVPTDDISSSEEREGKVRITRQLIERKELLHNI
QLLKIELSQKTMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDNQLAFQQKDASKY
QELMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQLSIP
EYVSVRFYELVNPLRKEICELQVKKNILAEELSTNKNQLKQLTETYEEDRKNYSEVQIRC
QRLALELADTKQLIQQGDYRQENYDKVKSERDALEQEVIELRRKHEILEASHMIQTKERS
ELSKEVVTLEQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEESKKAREEIDH
YKTEYENKLHDELEQIRLKTNQEIDQLRNASREMYERENRNLREARDNAVAEKERAVMAE
KDALEKHDQLLDRDMDEIGNHHSQ

>gi568815585r:72659798_72881832|GENSCAN_predicted_CDS_7|1335_bp
atgtctcgaaaaatttcaaaggagtcaaaaaaagtgaacatctctagttctctggaatct
gaagatattagtttagaaacaacagttcctacggatgatatttcctcatcagaagagcga
gagggcaaagtcagaatcaccaggcagctaattgaacgaaaagaactacttcataatatt
cagttactaaaaattgagctatcccagaaaactatgatgatcgacaatttgaaagtggat
tatcttacaaagattgaagaattggaggagaaacttaatgatgcacttcaccagaagcag
ctactaacattgagattagacaaccaattggcttttcaacagaaagatgccagcaaatat
caagaattaatgaaacaagaaatggaaaccattttgttgagacagaaacaactagaagag
acaaatcttcagctaagagaaaaagctggagatgttcgtcgaaacctgcgtgactttgag
ttgacagaagagcaatatattaaattaaaagcttttcctgaagatcagctttctattcct
gaatatgtatctgttcgcttctatgagctagtgaatccattaagaaaggaaatctgtgaa
ctacaagtgaaaaagaatatcctagcagaagaattaagtacaaacaaaaaccaactgaag
cagctgacagagacatatgaggaagatcgaaaaaactactctgaagttcaaattagatgt
caacgtttggccttagaattagcagacacaaaacagttaattcagcaaggtgactaccgt
caagagaactatgataaagtcaagagtgaacgtgatgcacttgaacaggaagtaattgag
cttaggagaaaacatgaaatacttgaagcctctcacatgattcaaacaaaagaacgaagt
gaattatcaaaagaggtagtcaccttagagcaaactgttactttactgcaaaaggataaa
gaatatcttaatcgccaaaacatggagcttagtgttcgctgtgctcatgaagaggatcgc
cttgaaagacttcaagctcaactggaagaaagcaaaaaggctagagaagagatagaccat
tataaaacagaatatgaaaataaactacatgatgaactagaacaaatcagattgaaaacc
aaccaagaaattgatcaacttcgaaatgcctctagggaaatgtatgaacgagaaaacaga
aatctccgagaagcaagggataatgctgtggctgaaaaggaacgagcagtgatggctgaa
aaggatgctttagaaaaacacgatcagctcttagacagggacatggatgaaattggaaat
catcattctcagtaa