Result of FASTA (ccds) for pF1KA0947
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0947, 2266 aa
  1>>>pF1KA0947 2266 - 2266 aa - 2266 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.3781+/-0.00132; mu= -6.5373+/- 0.079
 mean_var=357.0310+/-74.739, 0's: 0 Z-trim(111.9): 21  B-trim: 399 in 1/50
 Lambda= 0.067877
 statistics sampled from 12769 (12782) to 12769 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.393), width:  16
 Scan time:  7.970

The best scores are:                                      opt bits E(32554)
CCDS47187.1 ICE1 gene_id:23379|Hs108|chr5          (2266) 14932 1478.0       0


>>CCDS47187.1 ICE1 gene_id:23379|Hs108|chr5               (2266 aa)
 initn: 14932 init1: 14932 opt: 14932  Z-score: 7912.6  bits: 1478.0 E(32554):    0
Smith-Waterman score: 14932; 99.9% identity (100.0% similar) in 2266 aa overlap (1-2266:1-2266)

               10        20        30        40        50        60
pF1KA0 MMPGETHSAAPGTAADLSRCQGCASLQQNLNEYVEALITLKQKIINTDNLLTEYQKKCDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MMPGETHSAAPGTAADLSRCQGCASLQQNLNEYVEALITLKQKIINTDNLLTEYQKKCDE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 LQFARRENSNLHHQVEEMLQKISPLQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQFARRENSNLHHQVEEMLQKISPLQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 EECLKSDAQKKKLEAKVKKLQEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EECLKSDAQKKKLEAKVKKLQEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EKELRHIGTQISSDSYGSIDKRKVKLLLKELWLCVNTTHRLPGEGSRCVPEKPAKAITSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EKELRHIGTQISSDSYGSIDKRKVKLLLKELWLCVNTTHRLPGEGSRCVPEKPAKAITSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 RVPGEDGTLPPTQGSPLRTSNVQTCLTKLSMEIKEDFLCQNVEKQSSSGTNCSSDHVFNE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RVPGEDGTLPPTQGSPLRTSNVQTCLTKLSMEIKEDFLCQNVEKQSSSGTNCSSDHVFNE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 NGNLEVLVQSHRDGGSTEFVDHDHFFDEDLQAAIDFFKLPPPLLSPVPSPPPMSSPHPGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NGNLEVLVQSHRDGGSTEFVDHDHFFDEDLQAAIDFFKLPPPLLSPVPSPPPMSSPHPGS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 LPSSFAPETYFGEYTDSSDNDSVQLRNSAESVSEDDTTESQNYFGSLRKNKGSGTWEEKP
       :::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS47 LPSSFAPETYFGEYTDSSDNDSVQLRNSAECVSEDDTTESQNYFGSLRKNKGSGTWEEKP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 KSHEAIQALNTWEVNKVTTSGLETFTATLRESSATHSLVGEKHWTTASRSMSDRKRDILH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KSHEAIQALNTWEVNKVTTSGLETFTATLRESSATHSLVGEKHWTTASRSMSDRKRDILH
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 ETKTQMEVREMDKSVQTEKTIHKLTRGLCIERLSASPAQEKEAAPGKSELCSSPLGKRPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ETKTQMEVREMDKSVQTEKTIHKLTRGLCIERLSASPAQEKEAAPGKSELCSSPLGKRPL
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 NELMESEGKTVLSKMMGSPKSEFTKWTRINEITSEPDRITVSGHFHRLSRELEKEKEDTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NELMESEGKTVLSKMMGSPKSEFTKWTRINEITSEPDRITVSGHFHRLSRELEKEKEDTQ
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 GFTLGESPESEDDDSGDGMDVAGLDIETSFSSSSTLVALSVGSNPQSSSGLDCGNDTDIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GFTLGESPESEDDDSGDGMDVAGLDIETSFSSSSTLVALSVGSNPQSSSGLDCGNDTDIT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 TKVFSTEPHHSEHKLQTKTLNTLHLQSEPPECSIGGNNLENSLCALSPELGASNFNDQKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TKVFSTEPHHSEHKLQTKTLNTLHLQSEPPECSIGGNNLENSLCALSPELGASNFNDQKS
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 SGIEYTKVVKGLTKIHSLPRSVFMKATKDGQCESQDPRIELTLNKPDFTSLIGSQAALIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGIEYTKVVKGLTKIHSLPRSVFMKATKDGQCESQDPRIELTLNKPDFTSLIGSQAALIK
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 SGLGFVKSTSWHHSDLLRKGGEESLRAKSEHEQKTSHQLQKAMPFLQNRGPTPKPDLLRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGLGFVKSTSWHHSDLLRKGGEESLRAKSEHEQKTSHQLQKAMPFLQNRGPTPKPDLLRE
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 NNNPVEFKTTASVLPNQVSVITKQTRPEKVQSAKLEHLRPHRVEPTLVTENSGNKTGMST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NNNPVEFKTTASVLPNQVSVITKQTRPEKVQSAKLEHLRPHRVEPTLVTENSGNKTGMST
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 IAKCDGERDDTTQNITEVAAVKSISPEVSASRRKLDFNSPGGSSPVENSDCSTNSRLSFS
       .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VAKCDGERDDTTQNITEVAAVKSISPEVSASRRKLDFNSPGGSSPVENSDCSTNSRLSFS
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 PENILIQNQDIVREAAVQGDGQKQRQPQATDLDSSGTHGSEMLPATEVTVSGGFSVEETS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PENILIQNQDIVREAAVQGDGQKQRQPQATDLDSSGTHGSEMLPATEVTVSGGFSVEETS
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 CGDTGRSGGEALAVANDSTSTPQNANGLWKLKSTTPGGALPECFGTTDTTFSSAFCRKHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CGDTGRSGGEALAVANDSTSTPQNANGLWKLKSTTPGGALPECFGTTDTTFSSAFCRKHG
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 ETQDTSQSSLPGTLHCYTGIREGGDDTEVESEAFSCSEGSEQQDAPDDSQKNLGDTDAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ETQDTSQSSLPGTLHCYTGIREGGDDTEVESEAFSCSEGSEQQDAPDDSQKNLGDTDAAV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA0 AEVRPSLEVGYLTSALQDFNISTFSELDRLSTSEVVMFLESCQLGDYSSGDSVSECSSKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AEVRPSLEVGYLTSALQDFNISTFSELDRLSTSEVVMFLESCQLGDYSSGDSVSECSSKG
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA0 TLSKEMNKELKASEIGEKYRKQPCEEETLGTCEEWIESEEDDYSLKNTSQLTQCSLETLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TLSKEMNKELKASEIGEKYRKQPCEEETLGTCEEWIESEEDDYSLKNTSQLTQCSLETLS
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA0 EVLTKIRQELQTNSEDCNGKDTGSLLLLNVNNNMTTENLKEKSPFRETTGSSSHASEPTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EVLTKIRQELQTNSEDCNGKDTGSLLLLNVNNNMTTENLKEKSPFRETTGSSSHASEPTP
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360      1370      1380
pF1KA0 QAAALDTEGSSPISGMPQNENPQSRPEARSDAGRQTDGGEEDLPEPVEPSALCSDSVMEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QAAALDTEGSSPISGMPQNENPQSRPEARSDAGRQTDGGEEDLPEPVEPSALCSDSVMEP
             1330      1340      1350      1360      1370      1380

             1390      1400      1410      1420      1430      1440
pF1KA0 SIEQSSNCEAETTFQCQIATVTSEVINVLINKDQNLVIEKGDNWTIISGVAVLPHVDQVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SIEQSSNCEAETTFQCQIATVTSEVINVLINKDQNLVIEKGDNWTIISGVAVLPHVDQVT
             1390      1400      1410      1420      1430      1440

             1450      1460      1470      1480      1490      1500
pF1KA0 LCDIPGDIPISQDQGELEAGCIPVTSAEKSPEASHTGPAFQEAPCGNNLSCPQEDVSSSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LCDIPGDIPISQDQGELEAGCIPVTSAEKSPEASHTGPAFQEAPCGNNLSCPQEDVSSSG
             1450      1460      1470      1480      1490      1500

             1510      1520      1530      1540      1550      1560
pF1KA0 QSTNFDKSRLRNRPVKPSIWISSQIYDQNFETQIVASDHTYYNSKLEPSGKNKNRSKISN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QSTNFDKSRLRNRPVKPSIWISSQIYDQNFETQIVASDHTYYNSKLEPSGKNKNRSKISN
             1510      1520      1530      1540      1550      1560

             1570      1580      1590      1600      1610      1620
pF1KA0 KDQSNKPVKTSASSRVETHQSEVAQSFSGEKANTKTQRSQTQTILANADTSTPTDCSPDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KDQSNKPVKTSASSRVETHQSEVAQSFSGEKANTKTQRSQTQTILANADTSTPTDCSPDT
             1570      1580      1590      1600      1610      1620

             1630      1640      1650      1660      1670      1680
pF1KA0 LSKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSSPSSPASPVGQVSPFRETPVPPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSSPSSPASPVGQVSPFRETPVPPA
             1630      1640      1650      1660      1670      1680

             1690      1700      1710      1720      1730      1740
pF1KA0 MSPWPEDPRRASPPDPSPSPSAASASERVVPSPLQFCAATPKHALPVPGRLPPCASGHAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MSPWPEDPRRASPPDPSPSPSAASASERVVPSPLQFCAATPKHALPVPGRLPPCASGHAA
             1690      1700      1710      1720      1730      1740

             1750      1760      1770      1780      1790      1800
pF1KA0 VGGPQENSVKILDTMYPELSARARTLNILKGNIQLTRGPPADCKNLPGPASAMIGFKTIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VGGPQENSVKILDTMYPELSARARTLNILKGNIQLTRGPPADCKNLPGPASAMIGFKTIT
             1750      1760      1770      1780      1790      1800

             1810      1820      1830      1840      1850      1860
pF1KA0 SAATAFVKTGSSSGGDCNQDKSRDLGTQQDSSGKRTLSTSTLRSAKRLRLDTGSPEPETR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SAATAFVKTGSSSGGDCNQDKSRDLGTQQDSSGKRTLSTSTLRSAKRLRLDTGSPEPETR
             1810      1820      1830      1840      1850      1860

             1870      1880      1890      1900      1910      1920
pF1KA0 GVTAEGIHKNLPGNLPPAEVATTNEERSCSSPAVSAVSQLPLSPKETVESHDKAIANALK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GVTAEGIHKNLPGNLPPAEVATTNEERSCSSPAVSAVSQLPLSPKETVESHDKAIANALK
             1870      1880      1890      1900      1910      1920

             1930      1940      1950      1960      1970      1980
pF1KA0 KIAEFSFDLLPVIRSHVYVGNISKKPVMRDQEKEVVYEFSTTKKHLAECLLHSILSELKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KIAEFSFDLLPVIRSHVYVGNISKKPVMRDQEKEVVYEFSTTKKHLAECLLHSILSELKI
             1930      1940      1950      1960      1970      1980

             1990      2000      2010      2020      2030      2040
pF1KA0 QKISMDHNYIHALCRVYVGICRQLGDLERARLFCYSLLKEDFPESEKLTLFIANMWHDIF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QKISMDHNYIHALCRVYVGICRQLGDLERARLFCYSLLKEDFPESEKLTLFIANMWHDIF
             1990      2000      2010      2020      2030      2040

             2050      2060      2070      2080      2090      2100
pF1KA0 LSQSVINKAMQLVARQRAKGEVLNCLRAFLNWEKNAPVDVGFMVSKLLLTIQLCPKTEFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSQSVINKAMQLVARQRAKGEVLNCLRAFLNWEKNAPVDVGFMVSKLLLTIQLCPKTEFQ
             2050      2060      2070      2080      2090      2100

             2110      2120      2130      2140      2150      2160
pF1KA0 PSEKFGEDLSDNTWEYIFAIDLLCCHQKWIWTHDNIISKELWPVMDKWIKYRKGHANIAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PSEKFGEDLSDNTWEYIFAIDLLCCHQKWIWTHDNIISKELWPVMDKWIKYRKGHANIAY
             2110      2120      2130      2140      2150      2160

             2170      2180      2190      2200      2210      2220
pF1KA0 TPDIIIASILRLIGRLGQLGLKEGFPSAVKNISSVIGMFIQHAHDEDIPWGIQLAAVYAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TPDIIIASILRLIGRLGQLGLKEGFPSAVKNISSVIGMFIQHAHDEDIPWGIQLAAVYAL
             2170      2180      2190      2200      2210      2220

             2230      2240      2250      2260      
pF1KA0 CDLSPSNPAEISKILEAWRREASKSVPSAIVSCLEEVSALSTEELG
       ::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CDLSPSNPAEISKILEAWRREASKSVPSAIVSCLEEVSALSTEELG
             2230      2240      2250      2260      




2266 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 10:34:30 2016 done: Thu Nov  3 10:34:31 2016
 Total Scan time:  7.970 Total Display time:  0.240

Function used was FASTA [36.3.4 Apr, 2011]
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