Result of FASTA (ccds) for pF1KA0791
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0791, 1332 aa
  1>>>pF1KA0791 1332 - 1332 aa - 1332 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.0808+/-0.00111; mu= 10.3726+/- 0.067
 mean_var=142.7011+/-28.811, 0's: 0 Z-trim(107.2): 14  B-trim: 0 in 0/51
 Lambda= 0.107364
 statistics sampled from 9429 (9432) to 9429 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.29), width:  16
 Scan time:  5.840

The best scores are:                                      opt bits E(32554)
CCDS43310.1 NUP155 gene_id:9631|Hs108|chr5         (1332) 8831 1380.6       0
CCDS3921.1 NUP155 gene_id:9631|Hs108|chr5          (1391) 8831 1380.6       0
CCDS64142.1 NUP155 gene_id:9631|Hs108|chr5         (1327) 5061 796.7       0


>>CCDS43310.1 NUP155 gene_id:9631|Hs108|chr5              (1332 aa)
 initn: 8831 init1: 8831 opt: 8831  Z-score: 7394.9  bits: 1380.6 E(32554):    0
Smith-Waterman score: 8831; 100.0% identity (100.0% similar) in 1332 aa overlap (1-1332:1-1332)

               10        20        30        40        50        60
pF1KA0 MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA0 ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA0 RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA0 PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN
             1270      1280      1290      1300      1310      1320

             1330  
pF1KA0 FKSLQAKLERLH
       ::::::::::::
CCDS43 FKSLQAKLERLH
             1330  

>>CCDS3921.1 NUP155 gene_id:9631|Hs108|chr5               (1391 aa)
 initn: 8831 init1: 8831 opt: 8831  Z-score: 7394.6  bits: 1380.6 E(32554):    0
Smith-Waterman score: 8831; 100.0% identity (100.0% similar) in 1332 aa overlap (1-1332:60-1391)

                                             10        20        30
pF1KA0                               MSDMDYPLQGPGLLSVPNLPEISSIRRVPL
                                     ::::::::::::::::::::::::::::::
CCDS39 IDRQLQEDRMYPDLSELLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPEISSIRRVPL
      30        40        50        60        70        80         

               40        50        60        70        80        90
pF1KA0 PPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 PPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGL
      90       100       110       120       130       140         

              100       110       120       130       140       150
pF1KA0 VKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLYSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 VKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLYSLP
     150       160       170       180       190       200         

              160       170       180       190       200       210
pF1KA0 TDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 TDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLL
     210       220       230       240       250       260         

              220       230       240       250       260       270
pF1KA0 QFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 QFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGN
     270       280       290       300       310       320         

              280       290       300       310       320       330
pF1KA0 IARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 IARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVH
     330       340       350       360       370       380         

              340       350       360       370       380       390
pF1KA0 VRLPPGFSASSTVEKPSKVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 VRLPPGFSASSTVEKPSKVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQ
     390       400       410       420       430       440         

              400       410       420       430       440       450
pF1KA0 MTAGVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 MTAGVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSL
     450       460       470       480       490       500         

              460       470       480       490       500       510
pF1KA0 MFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAACDREVSAWA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 MFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAACDREVSAWA
     510       520       530       540       550       560         

              520       530       540       550       560       570
pF1KA0 TRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 TRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQP
     570       580       590       600       610       620         

              580       590       600       610       620       630
pF1KA0 PAMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 PAMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFK
     630       640       650       660       670       680         

              640       650       660       670       680       690
pF1KA0 SGNREITAIESSVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 SGNREITAIESSVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFM
     690       700       710       720       730       740         

              700       710       720       730       740       750
pF1KA0 RPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 RPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAE
     750       760       770       780       790       800         

              760       770       780       790       800       810
pF1KA0 LQKELQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 LQKELQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYST
     810       820       830       840       850       860         

              820       830       840       850       860       870
pF1KA0 DDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 DDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGV
     870       880       890       900       910       920         

              880       890       900       910       920       930
pF1KA0 VELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 VELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAA
     930       940       950       960       970       980         

              940       950       960       970       980       990
pF1KA0 PQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 PQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLA
     990      1000      1010      1020      1030      1040         

             1000      1010      1020      1030      1040      1050
pF1KA0 DKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 DKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI
    1050      1060      1070      1080      1090      1100         

             1060      1070      1080      1090      1100      1110
pF1KA0 SLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 SLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHS
    1110      1120      1130      1140      1150      1160         

             1120      1130      1140      1150      1160      1170
pF1KA0 SVQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 SVQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKEL
    1170      1180      1190      1200      1210      1220         

             1180      1190      1200      1210      1220      1230
pF1KA0 SDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQQVCTLNWDVGFVIQTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 SDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQQVCTLNWDVGFVIQTM
    1230      1240      1250      1260      1270      1280         

             1240      1250      1260      1270      1280      1290
pF1KA0 NEIGVPLPRLLEVYDQLFKSRDPFWNRMKKPLHLLDCIHVLLIRYVENPSQVLNCERRRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS39 NEIGVPLPRLLEVYDQLFKSRDPFWNRMKKPLHLLDCIHVLLIRYVENPSQVLNCERRRF
    1290      1300      1310      1320      1330      1340         

             1300      1310      1320      1330  
pF1KA0 TNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLERLH
       ::::::::::::::::::::::::::::::::::::::::::
CCDS39 TNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLERLH
    1350      1360      1370      1380      1390 

>>CCDS64142.1 NUP155 gene_id:9631|Hs108|chr5              (1327 aa)
 initn: 5055 init1: 5055 opt: 5061  Z-score: 4239.0  bits: 796.7 E(32554):    0
Smith-Waterman score: 8282; 95.2% identity (95.2% similar) in 1332 aa overlap (1-1332:60-1327)

                                             10        20        30
pF1KA0                               MSDMDYPLQGPGLLSVPNLPEISSIRRVPL
                                     ::::::::::::::::::::::::::::::
CCDS64 IDRQLQEDRMYPDLSELLMVSAPNNPTVSGMSDMDYPLQGPGLLSVPNLPEISSIRRVPL
      30        40        50        60        70        80         

               40        50        60        70        80        90
pF1KA0 PPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGL
      90       100       110       120       130       140         

              100       110       120       130       140       150
pF1KA0 VKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLYSLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 VKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLYSLP
     150       160       170       180       190       200         

              160       170       180       190       200       210
pF1KA0 TDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 TDNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLL
     210       220       230       240       250       260         

              220       230       240       250       260       270
pF1KA0 QFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 QFTFSEDDPILQIAIDNSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAAGN
     270       280       290       300       310       320         

              280       290       300       310       320       330
pF1KA0 IARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 IARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVH
     330       340       350       360       370       380         

              340       350       360       370       380       390
pF1KA0 VRLPPGFSASSTVEKPSKVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 VRLPPGFSASSTVEKPSKVHRALYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQ
     390       400       410       420       430       440         

              400       410       420       430       440       450
pF1KA0 MTAGVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MTAGVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSL
     450       460       470       480       490       500         

              460       470       480       490       500       510
pF1KA0 MFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAACDREVSAWA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAACDREVSAWA
     510       520       530       540       550       560         

              520       530       540       550       560       570
pF1KA0 TRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 TRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQP
     570       580       590       600       610       620         

              580       590       600       610       620       630
pF1KA0 PAMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PAMSTPVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFK
     630       640       650       660       670       680         

              640       650       660       670       680       690
pF1KA0 SGNREITAIESSVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 SGNREITAIESSVPCQLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFM
     690       700       710       720       730       740         

              700       710       720       730       740       750
pF1KA0 RPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAE
     750       760       770       780       790       800         

              760       770       780       790       800       810
pF1KA0 LQKELQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYST
       :::                                                         
CCDS64 LQK---------------------------------------------------------
     810                                                           

              820       830       840       850       860       870
pF1KA0 DDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGV
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 -------ANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGV
                   820       830       840       850       860     

              880       890       900       910       920       930
pF1KA0 VELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 VELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAA
         870       880       890       900       910       920     

              940       950       960       970       980       990
pF1KA0 PQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLA
         930       940       950       960       970       980     

             1000      1010      1020      1030      1040      1050
pF1KA0 DKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 DKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEI
         990      1000      1010      1020      1030      1040     

             1060      1070      1080      1090      1100      1110
pF1KA0 SLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 SLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHS
        1050      1060      1070      1080      1090      1100     

             1120      1130      1140      1150      1160      1170
pF1KA0 SVQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 SVQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHCAGYSDPILVQTLWQDIIEKEL
        1110      1120      1130      1140      1150      1160     

             1180      1190      1200      1210      1220      1230
pF1KA0 SDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQQVCTLNWDVGFVIQTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 SDSVTLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFIVQFLEQQVCTLNWDVGFVIQTM
        1170      1180      1190      1200      1210      1220     

             1240      1250      1260      1270      1280      1290
pF1KA0 NEIGVPLPRLLEVYDQLFKSRDPFWNRMKKPLHLLDCIHVLLIRYVENPSQVLNCERRRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 NEIGVPLPRLLEVYDQLFKSRDPFWNRMKKPLHLLDCIHVLLIRYVENPSQVLNCERRRF
        1230      1240      1250      1260      1270      1280     

             1300      1310      1320      1330  
pF1KA0 TNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLERLH
       ::::::::::::::::::::::::::::::::::::::::::
CCDS64 TNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLERLH
        1290      1300      1310      1320       




1332 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 10:19:33 2016 done: Thu Nov  3 10:19:34 2016
 Total Scan time:  5.840 Total Display time:  0.250

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com