GENSCAN 1.0	Date run:  3-Nov-116	Time: 09:30:53

Sequence gi568815576f:29878441_30125798 : 247358 bp : 41.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5128   5290  163  0  1   54   90   174 0.980  12.14
 1.02 Term +   7388   7497  110  0  2   52   40   152 0.938   4.49
 1.03 PlyA +  12801  12806    6                               1.05

 2.04 PlyA -  14695  14690    6                               1.05
 2.03 Term -  17623  17313  311  2  2   72   42   230 0.960  11.04
 2.02 Intr -  18218  17901  318  0  0  120   62   434 0.945  39.01
 2.01 Init -  20726  20657   70  2  1   21  101    41 0.348  -0.04
 2.00 Prom -  28216  28177   40                              -1.65

 3.00 Prom +  57184  57223   40                              -6.65
 3.01 Init +  63403  63408    6  0  0   92   89     4 0.056   1.69
 3.02 Intr +  77630  77742  113  1  2   48   67    51 0.006  -2.74
 3.03 Intr +  92536  92622   87  1  0   91  115    56 0.971   6.77
 3.04 Intr +  93202  93374  173  1  2   86  -27   141 0.072   1.06
 3.05 Intr +  99985 100091  107  2  2    8   91    85 0.128  -0.19
 3.06 Intr + 100496 100612  117  1  0   31  101   113 0.167   6.64
 3.07 Intr + 106060 106178  119  0  2   59  100    60 0.120   2.64
 3.08 Intr + 113064 113230  167  0  2   26  101   165 0.138  10.28
 3.09 Intr + 120321 120417   97  1  1   91   89    70 0.965   5.55
 3.10 Intr + 123580 123654   75  1  0   47   95    75 0.778   1.81
 3.11 Intr + 124440 124553  114  0  0  121  111    93 0.999  13.54
 3.12 Intr + 128674 128879  206  1  2   92   99   267 0.999  26.12
 3.13 Intr + 129461 129592  132  0  0  108   94   222 0.954  24.50
 3.14 Intr + 130578 130689  112  1  1   77  106    80 0.999   7.22
 3.15 Intr + 133928 134123  196  2  1   69   83   184 0.978  14.50
 3.16 Intr + 134916 135101  186  2  0   71   89   188 0.995  16.16
 3.17 Intr + 138088 138258  171  0  0   75   44   118 0.919   5.32
 3.18 Intr + 139487 139632  146  1  2  136  105    54 0.999  10.06
 3.19 Intr + 141040 142444 1405  1  1   79   89  1016 0.962  89.13
 3.20 Intr + 143589 143699  111  2  0   77   77    82 0.698   5.66
 3.21 Intr + 144169 144257   89  0  2  120   81    -2 0.737   0.15
 3.22 Intr + 145017 145043   27  0  0  134   77    43 0.907   4.11
 3.23 Intr + 146634 146757  124  0  1   53   53   110 0.865   3.67
 3.24 Term + 148869 148994  126  2  0   80   53   100 0.435   3.00
 3.25 PlyA + 149183 149188    6                               1.05

 4.10 PlyA - 149236 149231    6                               1.05
 4.09 Term - 149866 149736  131  2  2   64   54    96 0.049   1.16
 4.08 Intr - 151286 151178  109  2  1   53   55    98 0.112   1.94
 4.07 Intr - 153843 153727  117  0  0   78   20   108 0.093   2.74
 4.06 Intr - 161838 161737  102  0  0   62  110    27 0.282   1.75
 4.05 Intr - 162193 162114   80  2  2  101   94    45 0.315   4.75
 4.04 Intr - 168248 168008  241  2  1   46   20   334 0.435  18.60
 4.03 Intr - 168666 168374  293  1  2   27   81   244 0.048  13.53
 4.02 Intr - 202499 202451   49  2  1   87  110    37 0.056   3.13
 4.01 Init - 214160 214104   57  2  0   65   92    35 0.184   2.96
 4.00 Prom - 219001 218962   40                              -5.05

 5.00 Prom + 220943 220982   40                              -2.95
 5.01 Init + 222081 222255  175  2  1   71    9   123 0.049   2.26
 5.02 Intr + 226616 226999  384  0  0   47   95   276 0.021  18.10
 5.03 Intr + 243524 243774  251  0  2   85   75   227 0.681  17.33
 5.04 Term + 246111 246125   15  2  0  121   48    12 0.559  -2.24
 5.05 PlyA + 247347 247352    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  93202  93397  196  1  1   86   42   151 0.910   6.20
S.002 Init - 168753 168469  285  0  0   87   49   237 0.923  16.82
S.003 Intr + 243192 243349  158  0  2   52   96    94 0.975   5.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:29878441_30125798|GENSCAN_predicted_peptide_1|90_aa
MGARRPSSARTLDAGEAGSRARAAFPDLAGMGPCGSGCGTYPRSARSYSHELPGVKWNAV
TKGSIRVLEGGVVKVLTSLEEVEENVVTIV

>gi568815576f:29878441_30125798|GENSCAN_predicted_CDS_1|273_bp
atgggagctcggcggccgagctcggcccggaccctagatgcgggggaggcggggtcccgg
gctcgggctgccttcccagacctggcggggatgggcccgtgcggctctgggtgtgggacg
taccctcggagcgcccggagttattcccacgaactcccgggagtaaagtggaatgctgtt
accaaaggaagtattcgtgttttagaggggggtgtggtgaaggttcttacaagtttggaa
gaggtggaagaaaatgttgttacaattgtgtag

>gi568815576f:29878441_30125798|GENSCAN_predicted_peptide_2|232_aa
MHVYNFVGLKAPHLNPTGGKCYKYYGNYVRQKANSSDFLEFKMGREAVETTHNINYTSGP
ETVQWWFKKCCKGDESLEDEECSGRPEVGNDQLRAIIEADPLTTTREIAEELNVDHSTLV
WQAIEANWKVLGIQAWATTPSQKVKKLDKWVPHELTENFKNCRFEMLSSLILRNDDEPFL
GWIVMCDKKWILYNNSDDQLSGWTEKTLQSTSQSRTCTKKWSWSLFGGLLLV

>gi568815576f:29878441_30125798|GENSCAN_predicted_CDS_2|699_bp
atgcatgtatacaactttgttggattgaaggctcctcatctcaaccccactggaggtaaa
tgctataaatactatggaaattatgttagacaaaaagcaaattcaagtgattttcttgag
ttcaaaatgggtcgtgaagcagtggagacaactcacaacatcaactacacatctggccca
gaaactgtgcagtggtggttcaagaagtgttgcaaaggagacgagagccttgaagatgag
gagtgtagtggccggccagaagttggcaatgaccaactgagagcaatcatcgaagctgat
cctcttacaactacacgagaaattgccgaagaactcaatgtcgaccattctacccttgtt
tggcaggcaattgaagccaactggaaagtgctgggaatacaggcgtgggctaccacgccc
agccaaaaggtgaaaaagcttgataagtgggtgcctcatgagctgaccgaaaattttaaa
aattgtcgatttgaaatgttgtcttctcttattctacgtaacgacgacgaaccatttctt
ggttggattgtgatgtgcgacaaaaagtggattttatacaacaacagtgatgaccagcta
agtggctggaccgagaagacactccaaagcacttcccaaagccgaacttgcaccaaaaag
tggtcatggtcactgtttggcggtctgctcctggtctga

>gi568815576f:29878441_30125798|GENSCAN_predicted_peptide_3|1401_aa
MVSFDILSNLVHLCDSMSFKQLKWMSRVCTTLEKLSQRNRLHHKGKKRALLDTEEGTGIS
PPNLGLLSWQYFDPIVGGAALHTPSCIFNQKENLMDNLMTYGPFRAQLKQRRWSNKPATF
SSILRKCFGLFQDEETRHSLECIQANQIFPRKQLIREDENLQVPFLELHGESTEFVGRAE
DAIIALSNYRLHIKFKESLVNGVSVYNVTWLFEELVVALNVFDALFEHEFGEIYIRKSIV
RCQFSTFEQCQEWLKRLNNAIRPPAKIEDLFSFAYHAWCMEVYASEKEQHGDLCRPGEHV
TSRFKNEVERMGFDMNNAWRISNINEKYKIWIKGLIAFTIEKRRLDYPERDIVLLCGSYP
QELIVPAWITDKELESVSSFRSWKRIPAVIYRHQSNGAVIARCGQPEVSWWGWRNADDEH
LVQSVAKACASDSRSSGSKLSTRNTSRDFPNGGDLSDVEFDSSLSNASGAESLAIQPQKL
LILDARSYAAAVANRAKGGGCECPEYYPNCEVVFMGMANIHSIRRSFQSLRLLCTQMPDP
GNWLSALESTKWLHHLSVLLKSALLVVHAVDQDQRPVLVHCSDGWDRTPQIVALAKLLLD
PYYRTIEGFQVLVEMEWLDFGHKFADRCGHGENSDDLNERCPVFLQWLDCVHQLQRQFPC
SFEFNEAFLVKLVQHTYSCLFGTFLCNNAKERGEKHTQERTCSVWSLLRAGNKAFKNLLY
SSQSEAVLYPVCHVRNLMLWSAVYLPCPSPTTPVDDSCAPYPAPGTSPDDPPLSRLPKTR
SYDNLTTACDNTVPLASRRCSDPSLNEKWQEHRRSLELSSLAGPGEDPLSADSLGKPTRV
PGGAELSVAAGVAEGQMENILQEATKEESGVEEPAHRAGIEIQEGKEDPLLEKESRRKTP
EASAIGLHQDPELGDAALRSHLDMSWPLFSQGISEQQSGLSVLLSSLQVPPRGEDSLEVP
VEQFRIEEIAEGREEAVLPIPVDAKVGYGTSQSCSLLPSQVPFETRGPNVDSSTDMLVED
KVKSVSGPQGHHRSCLVNSGKDRLPQTMEPSPSETSLVERPQVGSVVHRTSLGSTLSLTR
SPCALPLAECKEGLVCNGAPETENRASEQPPGLSTLQMYPTPNGHCANGEAGRSKDSLSR
QLSAMSCSSAHLHSRNLHHKWLHSHSGRPSATSSPDQPSRSHLDDDGMSVYTDTIQQRLR
QIESGHQQEVETLKKQVQELKSRLESQYLTSSLHFNGDFGDEVTSIPDSESNLDQNCLSR
CSTEIFSEASWEQVDKQDTEMTRWLPDHLAAHCYACDSAFWLASRKHHCRDTDRVDQTWL
LVPGFACCQQSSPKWQQSICHVAAFDPLEKWPLGKAPYSPQFPDQGQGVSQEGGSVHAWV
WLRRGPEGFPGALSPGKAQSI

>gi568815576f:29878441_30125798|GENSCAN_predicted_CDS_3|4206_bp
atggtgagttttgatattctgagcaatcttgttcatttatgtgactccatgtcatttaaa
cagctcaaatggatgagtcgtgtttgcacaactttagagaaattgtcacaaaggaacaga
cttcaccataagggaaagaagagagccttgttggacactgaagaagggacggggatttct
cctcctaatctgggcctcttgtcatggcagtattttgatcccatagtaggtggagcagcc
ctgcacaccccctcctgtatctttaaccagaaagagaatttaatggacaatttaatgact
tacgggccatttcgggcccagctcaagcagagaagatggagcaacaagccagccacattt
tcatcaatcctgaggaaatgttttggacttttccaggatgaagagactcggcacagcctt
gagtgcatccaggccaatcagatctttcccaggaagcagctgatccgggaggatgagaat
cttcaggttcctttccttgaacttcatggagagagcacagagtttgtgggccgtgccgag
gatgccatcattgccctttccaattacagacttcacatcaagttcaaggagtctcttgtt
aatggtgttagtgtctataatgtaacttggctttttgaggaattggttgtagcactgaat
gtgtttgatgcattgtttgagcatgagtttggtgaaatttatattaggaaaagcattgta
aggtgtcagttttcaacctttgagcagtgtcaagagtggctgaagagactgaacaacgca
atccgaccacctgctaaaatagaagatctcttctcatttgcataccatgcttggtgcatg
gaggtctatgccagtgaaaaagagcaacatggagacctgtgcagaccaggggagcatgta
acttcaaggtttaaaaacgaggtggagaggatgggttttgatatgaacaacgcctggagg
atttccaacatcaatgagaagtacaagatttggattaaaggccttattgccttcactatt
gaaaaaagaagattggattatccagagagagacattgtcctattatgtggtagctatcct
caagagctcatagtgcctgcctggatcactgacaaagaactggaaagtgtatcaagtttc
aggtcctggaagcgcatccctgccgtcatctacaggcaccagagcaatggagctgtcatt
gcccgctgtggacagccagaggttagctggtggggctggcgaaatgcagatgatgagcat
ctggtacagtcagtagccaaagcttgtgcctctgactcccgatcgagtggcagcaagctg
tcaactaggaacacttctcgagactttcccaatgggggagacctttctgacgtggagttc
gattcttctctgtcaaatgcttcaggagcagagagtttagccatccaaccgcagaagctt
ttgatcttggatgcacgctcctatgcagctgctgtggcaaaccgagccaaaggaggaggc
tgcgaatgcccagagtattacccaaactgtgaagttgtgtttatggggatggcaaacatt
cattctattcggaggagttttcagtctctgcggttgctgtgcactcagatgccagatccg
ggaaattggctatcagctcttgaaagcacaaaatggctccatcacttgtctgtgcttctg
aaatcagcgcttctggtagtgcatgctgtggatcaggatcagcggccggtgctagtacac
tgctcagatggctgggaccgcaccccccagattgtggcattggctaagctcttgctggac
ccttattaccgaaccatagagggtttccaggtcctcgtggaaatggagtggctggatttt
ggccataaatttgctgaccggtgtggtcatggggagaactcggatgatctgaatgaacgt
tgcccagtgtttctgcagtggcttgactgtgttcatcagcttcagaggcaatttccttgc
tcttttgagttcaatgaagcattccttgtgaaactggtgcagcatacctattcctgcctg
tttggaacattcctgtgcaacaacgccaaggagagaggggaaaagcatactcaggaacgg
acatgttccgtgtggtcacttcttcgggcaggcaacaaggctttcaaaaacctactgtat
tcctctcagtcagaagccgtgctgtaccctgtgtgccatgtgcgtaacctgatgctgtgg
agtgcagtgtacctgccctgcccatccccaaccacccctgtggacgacagctgtgcacca
tacccagccccaggcaccagccctgatgatccccccctgagccggctaccaaagactaga
tcatacgacaatctgaccacagcctgtgacaacacagtgcctctggccagccggcgctgc
agcgaccccagcctgaacgagaagtggcaggagcaccggcgctcactagagctgagcagc
ctggctggccctggagaggatcccctttctgccgacagcctagggaagcccaccagagtg
ccggggggtgccgagctttctgttgcagccggagtagctgaggggcagatggagaacatc
ttgcaggaggccaccaaagaggagagtggagtagaggaacctgcccacagggcaggcatt
gagatacaggagggtaaagaggaccctctcttagaaaaggagagcaggaggaagacacct
gaggcctcagccattggacttcaccaagacccagaactgggtgatgctgctctgaggagc
catctggatatgagctggcctctgttctcacagggcatttctgaacagcagagtgggctc
agtgttctcctcagttctctccaggtcccccccaggggagaggattccctggaggtccct
gtggagcagtttcgaatagaagagattgcagagggtagggaggaagcagttcttccaatc
ccagtagatgcaaaagttggctatggtacctcacagtcatgttctctgctaccttcccaa
gtcccttttgagaccagaggaccaaacgtggacagttctacagacatgttagtggaagat
aaggtgaagtcagtaagtgggccccaaggtcatcatagatcttgccttgtaaatagtggc
aaggacaggcttcctcagaccatggaacccagcccttcagagacaagcctggtcgagagg
ccccaagtggggtctgtggtgcataggacttcccttggcagcactctcagcctgacacgt
tccccttgtgccttgcctttagccgaatgtaaagaggggcttgtgtgcaatggtgcccca
gagactgaaaacagggcctcagagcagcccccaggtcttagcaccctccagatgtacccc
acacccaatgggcattgcgccaatggggaggctggtaggagcaaggactcactgagccgt
cagctgtctgctatgagctgcagctctgcccacttacactcaaggaacttgcaccacaag
tggctgcatagccactcaggaaggccatctgcaaccagcagccccgaccagccttcccgc
agccacctggacgatgatggcatgtcagtgtacacagacacgatccaacagcgcctgcgt
cagattgagtcaggccaccagcaggaagtagaaactttgaagaaacaagtccaggagctg
aagagtcgcctggagagccagtacctgaccagctccctacactttaatggagactttggg
gatgaggtgacttcaatccccgactcggaaagcaatctggatcagaactgtttgtctcgc
tgcagcacagagattttctctgaagccagctgggagcaggtggataaacaggacacagag
atgacccgttggcttcctgaccacctggccgcccactgctatgcgtgcgacagtgccttc
tggcttgccagcaggaagcaccactgcagggacactgaccgtgttgatcaaacgtggcta
cttgtccctggctttgcatgctgccagcagagcagtccaaaatggcagcagtctatctgc
catgttgctgcctttgatcctctggagaagtggccgttgggcaaggctccttactcccca
cagttccctgaccaagggcaaggtgtgtctcaggaaggtggttctgtgcatgcctgggtg
tggttaaggcgtggcccagaaggcttccctggtgctctcagtccaggcaaagcccagagc
atctga

>gi568815576f:29878441_30125798|GENSCAN_predicted_peptide_4|392_aa
MLQDIGLGKDFMGKTSNAQASILAENLNGWGESDPEGGRAPQLDQGTHRTLHRSRLPEGP
EGRDYLMRTHEQATARLSPQDQSLHAELAPARKPLQLHQGHGQLRMNPMDLFEANDLFES
RSMTQLQVSLLALMGTNKCASQSGMTAYGMRRHFYDPNNYILPPMDHSIISVQMRINKCV
SQVAMTAPGTQRHISDTKLGTDKCGNSSISLQMGWASIKRFVFGKFRDHWLHIQTLAHME
IWVRGGMLLPWSCQAAWQTSRIPAASHGDYTGTQMRKCLRVPHTPMSNSAGAAGLGSHPR
SVGSKTQGLSTKLVDTAAALGTGHLNWQQLNEILQQHLQISPHSQKINRVYPSRTTGRSI
FSPPPHISFHSPTEGARVLAALKSEQQLKMEP

>gi568815576f:29878441_30125798|GENSCAN_predicted_CDS_4|1179_bp
atgcttcaggacattggtctgggtaaagattttatgggtaagacttcaaatgcacaggca
tcgatcctggcagaaaacctcaatggctggggagaatctgacccagaaggaggcagagct
ccacagctggatcaagggactcacaggactcttcatcggtcccgacttccagaagggcct
gaaggacgggattatcttatgcgcactcatgaacaagctacagccaggctcagtccccaa
gatcaatcactccatgcagaactggcaccagctagaaaacctctccaacttcatcaaggc
catggtcagctacggatgaaccccatggacctgttcgaggccaacgacctgtttgagagt
agaagtatgacacagctgcaggtgtctcttctcgccctgatgggcaccaacaaatgcgcc
agccagtcagggatgaccgcatacggcatgaggaggcatttctacgaccccaacaactac
atcctgccccccatggaccactccatcatcagtgtccagatgcgtataaacaagtgtgtc
agccaggtggccatgacggctcctgggacgcagcggcacatctctgacaccaagctggga
accgacaagtgtggtaactcctccatatccctgcagatgggatgggcatccatcaagagg
tttgtatttgggaagttcagggatcactggctgcacatccagacactggcccacatggag
atatgggtaagaggagggatgctgttgccttggagctgccaggctgcatggcagacaagc
aggattcctgctgcctcccatggagactatactggaacgcagatgaggaaatgtctccga
gttcctcatacacccatgagcaactcagctggtgctgcagggctaggatcccaccccagg
tctgtgggctctaaaacacaggggctttccaccaaactggtggatacagctgcagccctg
gggacaggtcacttgaactggcagcagctaaatgaaatcctgcaacagcaccttcaaatc
agccctcattcccaaaagatcaatagagtctatccttcaagaacaacaggcagaagcatt
ttctcacccccaccccacatctccttccactccccgactgaaggggccagagtactggct
gccctgaaatcagagcagcagctaaaaatggagccttga

>gi568815576f:29878441_30125798|GENSCAN_predicted_peptide_5|274_aa
MGKDFMTKAPKAIATKAKIDKWELIKPKSFCTAKEIVIRVNRKHTEWEKMFPIYPSDKAF
IMNRGQGKAGGSVLGSGFPHGGQDIAQLLLLPLGADVCSHLFLDELEGPFVLGDLELLHG
MLPIQGEATHLSDHIPHELGVFGQAPAMAAGPGLAHILGHLVALVEAHGCRIKQNHGCCS
PVTAKALTPHDYQPLGFKEGVNSHFLLFDKEPINVQVGFVSTGFHSMKVKVMTEATKVID
LENNLFRENSTTEIAHQGLDCDEEEECNDHFCHG

>gi568815576f:29878441_30125798|GENSCAN_predicted_CDS_5|825_bp
atgggcaaagacttcatgactaaagcaccaaaagcaattgcaacaaaagccaaaatagac
aaatgggaactaattaaaccaaagagcttctgcacagcaaaagaaattgtcatcagagtg
aacaggaaacatacagaatgggagaaaatgtttccaatctatccatctgacaaagctttt
attatgaacagagggcagggcaaggcagggggctcagtccttggcagcggctttcctcat
ggtggccaggacattgcgcagctcctcctacttcctcttggtgcggatgtgtgttcccac
ctttttcttgatgaacttgaaggcccttttgtccttggagaccttgagctactccatggg
atgctgcccatacagggtgaagccacacacctctcagatcatatcccgcatgaacttggt
gtgtttggtcaggcacctgcgatggcagctgggcctgggcttgctcacattcttggtcac
cttgtggcccttgttgaggcccatggctgtaggataaagcagaaccatggctgctgctct
ccagtgacagccaaggccttgaccccacatgattaccaacccctcggttttaaagaaggg
gtaaattcacacttcctgctgtttgacaaggagcctatcaacgtgcaagtgggatttgtc
tccactggctttcatagcatgaaagtaaaagtcatgacagaggctacaaaagtgattgat
ttggagaacaatctgtttcgggagaacagcactactgagatcgcccatcagggtctagac
tgtgatgaggaagaagaatgcaatgaccatttttgccatggatga