GENSCAN 1.0	Date run:  3-Nov-116	Time: 09:13:18

Sequence gi568815587r:47679108_47948313 : 269206 bp : 44.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.22 PlyA -    437    432    6                               1.05
 1.21 Term -    966    928   39  0  0  101   45    39 0.316  -1.91
 1.20 Intr -   6942   6786  157  2  1   73  121    61 0.839   7.91
 1.19 Intr -  11751  10969  783  2  0   70  100   523 0.917  42.29
 1.18 Intr -  13149  12996  154  1  1   78   65   114 0.972   7.23
 1.17 Intr -  20446  20339  108  2  0   59   72    65 0.782   2.26
 1.16 Intr -  26810  26757   54  0  0  131   53    46 0.870   4.35
 1.15 Intr -  31404  31270  135  1  0   41   73    84 0.464   2.74
 1.14 Intr -  35240  35177   64  2  1   86   85    48 0.111   2.59
 1.13 Intr -  40979  40827  153  2  0   77   29   164 0.115   9.67
 1.12 Intr -  44209  43869  341  2  2   65   70    86 0.307  -0.31
 1.11 Intr -  45065  44921  145  2  1   88   91    26 0.883   2.76
 1.10 Intr -  45521  45361  161  0  2   84  111   130 0.761  14.61
 1.09 Intr -  52454  52267  188  1  2   66   94   149 0.998  12.63
 1.08 Intr -  53563  53430  134  1  2   99  101    66 0.997   8.44
 1.07 Intr -  55022  54918  105  2  0   61  107    62 0.899   5.81
 1.06 Intr -  57633  57509  125  1  2   77   53   168 0.997  12.50
 1.05 Intr -  65056  64846  211  1  1  109   51   138 0.996  10.69
 1.04 Intr -  67287  66949  339  0  0   96   80   191 0.999  14.77
 1.03 Intr -  75557  75421  137  0  2  104   49   139 0.898  11.89
 1.02 Intr -  86255  86163   93  0  0   90   85    75 0.982   7.34
 1.01 Init -  88181  87956  226  2  1   88   57   265 0.988  20.03
 1.00 Prom -  94173  94134   40                              -4.96

 2.20 PlyA -  99176  99171    6                               1.05
 2.19 Term - 100087  99998   90  1  0  118   34    63 0.969   1.62
 2.18 Intr - 101340 101236  105  0  0   61   92    64 0.851   4.51
 2.17 Intr - 104091 103966  126  0  0   29   80   116 0.919   5.78
 2.16 Intr - 113839 113679  161  2  2   68   48   136 0.502   7.31
 2.15 Intr - 118777 118672  106  1  1  120   84   151 0.989  17.69
 2.14 Intr - 118967 118871   97  1  1  131   76    48 0.661   7.91
 2.13 Intr - 119155 119061   95  1  2   39   91   -11 0.659  -6.94
 2.12 Intr - 119356 119261   96  1  0   70  110   107 0.991  11.31
 2.11 Intr - 122823 122704  120  0  0   80   83    64 0.888   5.79
 2.10 Intr - 133117 132957  161  2  2  113   87    66 0.839   8.71
 2.09 Intr - 133322 133195  128  1  2   47   99    73 0.986   4.62
 2.08 Intr - 133940 133775  166  0  1   83   47   108 0.964   5.22
 2.07 Intr - 136542 136368  175  0  1   76   52   109 0.539   5.61
 2.06 Intr - 140351 140267   85  1  1   83   89    52 0.971   4.62
 2.05 Intr - 142714 142617   98  1  2   80   17   121 0.918   3.01
 2.04 Intr - 156702 156544  159  0  0   69   80    91 0.937   6.58
 2.03 Intr - 157894 157780  115  0  1   85  115    14 0.569   4.25
 2.02 Intr - 168915 168741  175  1  1   71  111    94 0.741   9.00
 2.01 Init - 169313 169112  202  2  1   55   60   208 0.588  11.74
 2.00 Prom - 174217 174178   40                              -3.06

 3.00 Prom + 189388 189427   40                              -3.46
 3.01 Init + 210769 210798   30  0  0   73   86    21 0.114   0.19
 3.02 Intr + 236456 236565  110  1  2    4   76   142 0.243   3.68
 3.03 Intr + 249305 249338   34  2  1   40  102    37 0.010  -1.47
 3.04 Intr + 259365 259439   75  2  0  110   14    55 0.032   0.01
 3.05 Intr + 268313 268441  129  1  0   78   82    96 0.124   8.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:47679108_47948313|GENSCAN_predicted_peptide_1|1283_aa
MGKKSRAVPGRRPILQLSPPGPRGSTPGRDPEPEPDTEPDSTAAVPSQPAPSAATTTTTA
VTAAAASDDSPSEGKDEQEAVQEVPRVVQNPPKPVMTTRPTAVKATGGLCLLGAYADSDD
DDNDVSEKLAQSKETNGNQSTDIDSTLANFLAEVNEGIQALSNSEEEKKGVAASLLAPLL
PEGIKEEEERWRRKVICKEEPVSEVKETSTTVEEATTIVKPQEIMLDNIEDPSQEDLCSV
VQSGESEEEEEQDTLELELVLERKKAELRALEEGDGSVSGSSPRSDISQPASQDGMRRLM
SKRGKWKMFVRATSPESTSRSSSKTGRDTPENGETAIGAENSEKIDENSDKEMEVEESPE
KIKVQTTPKVEEEQDLKFQIGELANTLTSKFEFLGINRQSISNFHVLLLQTETRIADWRE
GALNGNYLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNEQSGESQWEFPDGE
EEEEESQAQENRDETLAKQTLKDKTGTDSNSTESSETSTESPPPPPPPPPPAEDGEIQEV
EMEDEGSEEPPAPGTEEDTPLKPSAQTTVVTSQSSVDSTISSSSSTKGIKRKATEISTAV
VQRSATIGSSPVLYSQSAIATGHQAAGIGNQATGIGHQTIPVSLPAAGMGHQARGMSLQS
NYLGLAAAPAIMSYAECSVPIGVTAPSLQPVQARGAVPTATIIEPPPPPPPPPPPPPPAP
KMPPPEKTKKGRKDKAKKSKTKMPSLVKKWQSIQRELDEEDNSSSSEEDRESTAQKRIEE
WKQQQLTIPDPYEDFMYRHLQYYGYFKAQRGSLPNSATHQHVRKNNPQCLLNGSLGEKDD
LIPDTLQKEKLLWPISLSSAVHRQIEAINREWAPPQPEYFYQPKGNEKVPEIVGEKKGTV
VYQLDSVPIEGSYFTSSRVGGKRGIVKELAVTLQGPEDNTLLFESRFESGNLQKAVRVDT
YEYELTLRTDLYTNKHTQWFYFRVQNTRKDATYRFTIVNLLKPKSLYTVGMKPLLYSQLD
ANTRNIGWRREGNEIKYYKNNTDDGQQPFYCLTWTIQFPYDQDTCFFAHFYPYTYTDLQC
YLLSVANNPIQSQFCKLQTLCRSLAGNTVYLLTITNPSQTPQEAAAKKAVVLSARVHPGE
SNGSWVMKGFLDFILSNSPDAQLLRDIFVFKVLPMLNPDGVIVGNYRCSLAGRDLNRHYK
TILKESFPCIWYTRNMIKRLLEEREVLLYCDFHGHSRKNNIFLYGCNNNNRKYWLHERVF
PLMLCKNAPDKVIKETPTLPSKI

>gi568815587r:47679108_47948313|GENSCAN_predicted_CDS_1|3852_bp
atggggaagaagtcccgggcggtacccggccgtaggcccatcctgcaactctctccgccg
ggtcctcggggcagcacgccgggccgggacccggagccggaacccgacactgagccggac
tcaaccgcggcggtccccagccagcccgccccgtcggcggcgacgaccaccaccaccgcg
gtgactgccgccgcggcctcggacgactcgccttcagaaggcaaggatgaacaggaagcg
gtgcaggaggttcctagagttgttcagaatcctccaaaaccagtcatgaccactagaccc
acagctgttaaagcaacaggcggtctatgcttgcttggtgcttatgctgacagtgatgac
gatgacaatgatgtttccgaaaaactagcacaatccaaagagacaaatggaaaccagtca
actgatattgatagtacattggccaacttcctagcggaagtaaatgaaggaattcaggct
ctctcaaatagtgaggaggagaagaaaggggtggcagcatcgctgcttgctcctttattg
cctgagggaataaaagaagaagaagagagatggagaagaaaagtaatttgtaaagaggag
ccagtttcagaagtaaaagaaacaagtacaacagtagaagaagcaacaacaatagtaaag
ccacaggaaattatgttggacaatatagaagacccttctcaggaggatctttgcagtgtt
gtccaatctggagaaagtgaggaggaagaggaacaagatacccttgaactggagctagtt
ttggaaaggaaaaaagcagagttgcgagccttggaggaaggagatggtagtgtgtcaggg
tctagtccacgttctgatatcagccagccagcatctcaagatggaatgcgtaggcttatg
tctaaaagaggaaaatggaagatgtttgttcgagctaccagtccagaatctaccagtagg
agttctagtaaaactggacgagatactccagaaaatggagaaactgcaattggtgctgaa
aattcagaaaaaatagatgagaattcagataaagagatggaagtagaagaatctccagag
aaaataaaagtacagacaacaccaaaagtagaagaagaacaggatttgaaatttcagatt
ggagaactggcaaataccctgacaagtaaattcgagtttctaggcattaatagacaatcc
atctccaactttcatgtgctgctcttacagactgagactcgaattgcagactggcgggaa
ggggctcttaatggaaactaccttaaacgaaaacttcaggatgcagcagaacaactaaaa
cagtatgaaataaacgccactcctaaaggctggtcctgccactgggacagggatcataga
cggtatttctatgtaaacgaacagtcgggcgagtctcagtgggagtttccagatggtgaa
gaggaagaagaagaaagccaagcacaagaaaatagagatgagactcttgccaaacagacc
ttgaaagacaaaactggcactgattcaaattcaacagaatcctctgaaacttccacagaa
tcacctccaccccctcctccaccacctcctcctgcggaagatggtgagatccaggaggta
gagatggaggatgagggaagtgaggagccccctgccccaggaacagaggaagatacccct
ttgaaaccttcagcacaaaccacagttgtaactagccagagttcagttgattccaccatc
tctagttcttcttccactaaaggaataaagaggaaagctacagaaattagcactgcagtg
gttcagaggtcagctaccattggcagttctccagttctctatagccagtcagctatagct
acaggtcaccaggcagcagggattggaaaccaggcaacaggaattggacatcagacaata
ccagttagccttccagcagcaggaatgggtcatcaggccagaggaatgagcctgcagtca
aattaccttggactagcggcagcacctgcaattatgagttatgcagaatgttctgtccca
attggagtgactgctccctcattgcagccagttcaggcccgaggtgctgtgcctaccgct
accattatagaaccaccaccaccacctcctcctcctcctcctccaccaccaccagctccc
aaaatgccaccacctgaaaagacaaaaaaaggaaggaaagacaaggcaaagaagagtaag
accaaaatgccatctttggtaaaaaagtggcagagtatccagcgtgagttagatgaagag
gacaattctagttccagtgaagaggatcgggaatcaactgcacagaagcgaattgaagag
tggaaacagcagcagctgactattcctgatccttatgaagactttatgtaccgtcacctc
caatattatggctactttaaagctcagagaggcagtttaccaaactctgctacgcatcag
catgttcggaagaataaccctcaatgcctgttgaatggctctcttggggaaaaagatgat
ttgataccagacaccctgcaaaaggagaagcttctatggcctatcagtttatcttcagct
gtgcacagacagatagaagccatcaacagagagtgggctccacctcaaccagaatatttc
tatcagcctaaaggaaatgaaaaggtaccagagattgtaggagagaaaaaaggaacagtt
gtctatcaattagattcagtgcctatagaaggttcctattttaccagttccagagtggga
ggcaaacgaggaattgtcaaggaacttgctgtcacgttgcaaggaccagaagataatact
ctactgtttgaatcaaggtttgagagtgggaatctgcaaaaagctgtcagagtagacacc
tatgagtatgaactcaccttgcgaactgacctctacactaacaaacacactcagtggttt
tattttcgtgttcagaacaccagaaaagatgctacctatcgcttcaccattgtcaacttg
ctaaaacccaagagtctttatactgtagggatgaagccactcttgtactcccaattggat
gccaacacccgcaatattggctggaggagagaaggaaatgaaatcaagtactacaagaac
aacacggatgatgggcagcagcccttctactgtctcacgtggaccattcagtttccatat
gaccaggacacttgcttctttgcacacttctacccatatacatacactgatttgcaatgc
tacctcctgtcagtggcaaacaaccctatccagtctcagttctgcaagctccaaacttta
tgcaggagcctagcaggaaataccgtttacttgctcaccatcaccaacccatcccagacc
cctcaagaggcagctgcaaagaaagctgtggtcttgagtgccagagttcaccctggagaa
agtaatggctcctgggttatgaaaggctttttggacttcatccttagcaactccccagat
gcccagctcctcagagatatttttgtcttcaaggtgcttcccatgttaaatccagatggt
gtgattgtggggaattatcggtgttccttggccggaagggatttgaacaggcattataaa
accattctgaaggagtctttcccttgtatttggtacaccaggaacatgatcaaaagactt
cttgaagaaagagaggttctgttgtattgtgatttccatggccacagtcgtaagaataat
atcttcctgtatggctgtaataacaacaatcgcaaatactggcttcatgaacgagtcttt
cctttaatgttatgcaaaaatgcaccagataaggtaataaaagagacacccactttacca
tcgaagatctga

>gi568815587r:47679108_47948313|GENSCAN_predicted_peptide_2|819_aa
MLHLSAAPPAPPPEVTATARPCLCSVGRRGDGGKMAAAGALERSFVELSGAERERPRHFR
EFTVCSIAPLVPVISQKTRVQADHVHFAGTANAVAGAVKYSESAGGFYYVESGKLFSVTR
NRFIHWGDQSPSDRPLSLAVHCVEHDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPV
KKDLRLTAGTGHKLRLAYSPTMGLYLGIYMHAPKRGQETLIDFALTSTDIWALWHDAENQ
TVVKYINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPRLQGSVTEYEFSQEEFRNLQQEF
WCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKVNVDIARDVICLIKCLRLIEESVTV
DMSVIMEMSCYNLQSPEKAAEQILEDMITIDVENVMEDICSKLQEIRNPIHAIGLLIREM
DYETEVEMEKGFNPAQPLNIRMNLTQLYGSNTAGYIVCRGVHKIASTRFLICRDLLILQQ
LLMRLGDAALECFCQAASEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVIGLPE
LVIQLATSAITEAGDDWKSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQL
VVVLCERSQLQDLVEFPYVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKA
GTVMFEYGMRLGREVRTLRGLEKQGNCYLAALNCLRLIRPEYAWIVQPVSGAVKVDAAEL
LRLYLNYDLLEEAVDLVSEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALG
ENSANSHNIALSQKILDKLEDYQQKVDKATRDLLYRRTL

>gi568815587r:47679108_47948313|GENSCAN_predicted_CDS_2|2460_bp
atgcttcacctgtccgcagctccgcccgccccacccccggaagtgacggcgaccgcgcgg
ccctgcctttgttccgttgggcgtcgcggcgacggcgggaagatggcggcggcgggagcc
ctggaacggagcttcgtggagctaagcggagctgagcgcgaaaggccgaggcactttcgg
gaattcacagtctgcagcattgctcccttagtccctgtcatttctcagaagacgcgtgtg
caggctgaccacgttcattttgcagggactgcaaatgccgtggctggcgccgtaaaatac
agtgaaagcgcgggaggcttttactacgtggagagtggcaagttgttctccgtaaccaga
aacaggttcattcattggggtgaccagtcgccttcagatcgtcccctcagtcttgctgtt
cattgtgtggagcatgatgccttcatctttgctttgtgtcaggatcataaactacgaatg
tggtcttacaaggagcaaatgtgcctaatggtagctgacatgctggagtatgtccctgtg
aagaaagaccttcggcttactgctggaactggacacaaattacggcttgcttattccccc
accatgggactctacctggggatatacatgcatgcaccaaaacgaggacaggagacactg
attgactttgccttaacttccacggatatctgggccctgtggcatgatgctgagaaccaa
acagtagtgaaatacatcaactttgaacataatgttgcaggtcagtggaatccagttttt
atgcagcctctgccagaggaagagattgtcatcagagatgatcaagaccccagacttcaa
ggaagtgtaacagagtatgaattctcccaggaggagtttcgaaatttacaacaagaattc
tggtgcaagttctatgcctgttgtcttcagtatcaagaagccctctctcaccctcttgcc
ctacatttgaatccacacacaaacatggtgtgcctgctgaaaaaagtaaatgtggacatc
gctcgggatgtcatatgtcttataaaatgcctccggctgattgaagagtcagtaactgtg
gatatgtcagttataatggaaatgagttgttataacctacagtctccggaaaaggctgca
gagcagattctggaagatatgatcactattgatgtagaaaatgtgatggaggatatttgt
agtaaactgcaagagattaggaacccaatccatgcaattggactacttatacgggaaatg
gattatgaaacagaagtggaaatggaaaagggattcaatccagctcagcctttgaatatt
cgaatgaatcttacccagctctatggtagtaacacagcagggtatattgtgtgcagaggg
gtgcataaaatcgccagtactcgtttcctgatctgcagagatcttttgatcttacagcag
ctgttaatgaggcttggagatgctgctctggaatgtttttgtcaggcagcatctgaagta
ggcaaagaggaattcttggatcgcttgattcgctcagaggatggggagatcgtgtctacc
cccaggctgcagtattatgacaaggttttacgactactagatgtcattggtttgcctgaa
ctggttattcagttggctacatcagccataactgaagcaggtgatgactggaaaagtcag
gctactctaaggacatgtattttcaaacatcatttggatttgggtcacaatagccaagca
tatgaagccttaacccaaattcctgattccagcaggcaattagattgtttacggcagttg
gtggtagttctttgtgaacgctcacagctacaggatcttgtagagtttccctatgtgaat
ctgcataatgaggttgtgggaataattgagtcacgtgctagagctgtggaccttatgact
cacaattactatgaacttctgtatgcctttcacatctatcgccacaattaccgcaaggct
ggcacagtgatgtttgagtatggaatgcggcttggcagagaagttcgaactctccgggga
cttgagaaacaaggcaactgttatctggctgctctcaattgtttacgacttattcgtcca
gaatatgcgtggattgtgcagccagtgtctggtgcagtgaaggttgatgctgctgaattg
cttcgtttatacttaaactatgaccttttagaagaagctgtggatttggtgtcagaatat
gtggatgctgtattgggaaaaggacatcaatacttcggaattgagtttccactgtccgca
acagccccaatggtgtggcttccatactcctctattgatcagcttctccaagctctggga
gagaacagtgccaacagtcacaacatcgcactgtcccagaaaatacttgacaaattggag
gactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcggaccttgtga

>gi568815587r:47679108_47948313|GENSCAN_predicted_peptide_3|126_aa
MARGRYVEDWGDPYGLHQGVPLPSGFRFGEAKGKHAPEIKGQEESEMIPEVIVFFPYKNV
NCMRIEISLVHHTSAYSYECLAIVKQLCAWHAQDKVEQDAKGATRIILGLVMLTPDTFTD
TAKKKW

>gi568815587r:47679108_47948313|GENSCAN_predicted_CDS_3|378_bp
atggctcgtggcaggtatgtggaagactggggtgacccgtatggcctgcatcaaggagtt
cccttaccctctggcttccggtttggtgaggccaaaggaaagcacgcaccggagatcaaa
gggcaggaggagagcgagatgatcccggaagtcatcgtcttttttccttacaagaatgta
aactgcatgaggatagaaatttctcttgttcatcacaccagtgcctacagctatgagtgt
ttggcaatagtcaaacagctgtgtgcttggcacgctcaagacaaagttgagcaagatgcc
aagggagccacacgcattatcctgggcctggtgatgctcactccagacacattcacagat
acagcaaagaagaaatgg