GENSCAN 1.0	Date run:  3-Nov-116	Time: 09:09:05

Sequence gi568815597r:30833214_31159566 : 326353 bp : 45.70% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1468   1463    6                               1.05
 1.04 Term -   3629   3425  205  1  1   94   32    91 0.284   0.94
 1.03 Intr -   7576   7560   17  1  2   97   94    10 0.179  -3.16
 1.02 Intr -  13143  12970  174  0  0   52  100   109 0.486   8.64
 1.01 Init -  14123  13992  132  2  0   46   76    83 0.247   3.04
 1.00 Prom -  17592  17553   40                              -3.86

 2.00 Prom +  19348  19387   40                              -4.16
 2.01 Init +  27713  27730   18  1  0   82   82    22 0.751   1.10
 2.02 Term +  29148  29348  201  2  0   64   44   172 0.835   7.79
 2.03 PlyA +  34093  34098    6                               1.05

 3.09 PlyA -  36273  36268    6                               1.05
 3.08 Term -  40164  39998  167  1  2  151   40   284 0.525  27.98
 3.07 Intr -  41375  41084  292  2  1   82   66   365 0.996  30.41
 3.06 Intr -  43952  43339  614  0  2  109   94   512 0.975  46.00
 3.05 Intr -  45527  45410  118  2  1  100   87   196 0.995  20.74
 3.04 Intr -  47066  46976   91  1  1   99   52    54 0.398   2.90
 3.03 Intr -  48482  48305  178  0  1   37   15   142 0.343   0.78
 3.02 Intr -  54095  53990  106  2  1   13  105    59 0.309  -0.11
 3.01 Init -  56236  56183   54  1  0  113   36    65 0.475   5.08
 3.00 Prom -  66680  66641   40                              -2.76

 4.03 PlyA -  66807  66802    6                              -4.04
 4.02 Term -  67221  67060  162  0  0   60   43   165 0.901   7.14
 4.01 Init -  75373  75236  138  1  0  111   84   231 0.997  23.14
 4.00 Prom -  80859  80820   40                              -4.76

 5.20 PlyA -  83543  83538    6                               1.05
 5.19 Term - 100129  99998  132  1  0  111   54   205 0.986  17.49
 5.18 Intr - 103622 103430  193  1  1   66  102   346 0.999  33.29
 5.17 Intr - 108059 107938  122  2  2  102  102    28 0.997   4.89
 5.16 Intr - 108910 108785  126  1  0  103   72    66 0.871   7.38
 5.15 Intr - 112270 112133  138  1  0   63  111    90 0.995   9.46
 5.14 Intr - 117048 116920  129  0  0    9   91   157 0.592   8.99
 5.13 Intr - 119150 119021  130  1  1   81   74   132 0.897  11.80
 5.12 Intr - 120768 120501  268  1  1   72  109   220 0.991  19.09
 5.11 Intr - 133065 132769  297  1  0   94   75   152 0.916  11.35
 5.10 Intr - 134097 133954  144  1  0   56   99    74 0.898   5.55
 5.09 Intr - 135279 135141  139  0  1   98   80   101 0.969  10.34
 5.08 Intr - 141589 141438  152  2  2   97   99   103 0.965  12.18
 5.07 Intr - 146965 146849  117  2  0   69   66   107 0.955   7.04
 5.06 Intr - 148192 148099   94  1  1  104  123   122 0.997  16.84
 5.05 Intr - 159447 159177  271  2  1   81   84   270 0.963  23.44
 5.04 Intr - 162007 161841  167  1  2   54   58   274 0.963  19.76
 5.03 Intr - 173889 173781  109  2  1   71   89    59 0.028   4.59
 5.02 Intr - 226095 225991  105  2  0   58   98    88 0.522   6.13
 5.01 Init - 232572 232403  170  0  2   66   86   170 0.886  11.65
 5.00 Prom - 243779 243740   40                              -4.16

 6.04 PlyA - 244159 244154    6                               1.05
 6.03 Term - 261880 261774  107  2  2   17   35   166 0.147   2.77
 6.02 Intr - 267547 267455   93  2  0   64   25    97 0.164   0.94
 6.01 Init - 283196 283145   52  2  1   61   82    59 0.185   3.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 173840 173781   60  2  0   97   89    33 0.818   5.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:30833214_31159566|GENSCAN_predicted_peptide_1|175_aa
MAFVCAFLSDSAERPTSNSPSSPQNPMRQLHDYPYFTDEETEPKGSCEAKTTDSNYTDVY
AYLSIFQALQEDPISLLIKEKLCFSAAKKCLKATTSQTVMEKMRRLLSFQTECDKSHSVS
ADKSTPKDDQVLGPQGQSENSLSDFTIVKTKVCNQVICMNPMHVMDFGASVVDQC

>gi568815597r:30833214_31159566|GENSCAN_predicted_CDS_1|528_bp
atggcttttgtctgtgccttcctgtcagactctgctgaacgccctacaagtaacagccca
tccagtcctcagaaccctatgaggcagctccacgattacccctattttacagatgaggaa
actgagccaaaggggagctgtgaagccaaaaccactgattcaaattacacagatgtgtat
gcctacctctcaattttccaggcattacaggaggaccccatctccttgcttatcaaagag
aagctctgtttttctgctgctaaaaaatgtctaaaagccacaaccagtcaaaccgttatg
gagaagatgagaaggctgctcagcttccagacagagtgtgacaaatctcacagtgtctca
gccgataaatcaacccccaaagatgatcaagttctaggcccccaaggtcagagtgaaaac
tcattgagtgattttactattgtgaaaacaaaagtctgcaatcaagttatctgcatgaat
cctatgcatgtaatggactttggggcctctgttgtcgaccagtgttaa

>gi568815597r:30833214_31159566|GENSCAN_predicted_peptide_2|72_aa
MTSIIQSVLLLLIKKVNRKTASGRFFRRYPEEGTVTTGDDSSVHAIAPEDLPVGQDLEVE
DSDTDEPDTVEA

>gi568815597r:30833214_31159566|GENSCAN_predicted_CDS_2|219_bp
atgacttcgatcatccagagtgtactccttctacttattaaaaaagttaaccgtaagaca
gcctcaggcaggttcttcaggaggtatccagaagaaggcactgttaccacaggagatgac
agctccgtgcatgctattgcccctgaagaccttccagtgggacaagatctggaggtagaa
gacagtgatactgacgaacctgacaccgtggaggcctag

>gi568815597r:30833214_31159566|GENSCAN_predicted_peptide_3|539_aa
MGPPGMEEKRMEFVRADHVVPRRLLGPRSGQPLPCLLAVTVMEPGDRLLEAPAGPQQQQA
EVSRVPWERSAAPLGPDAQAFMGRLRSLCWVSPPEISGGRKQKVQCFHRARSLSPVISPS
PVPPHLCGELQLLVVSMEKMVVMAQRWRSENFERPVDLEGSGDDDSFPDDELDDLYSGSG
SGYFEQESGIETAMRFSPDVALAVSTTPAVLPTTNIQPVGTPFEELPSERPTLEPATSPL
VVTEVPEEPSQRATTVSTTMATTAATSTGDPTVATVPATVATATPSTPAAPPFTATTAVI
RTTGVRRLLPLPLTTVATARATTPEAPSPPTTAAVLDTEAPTPRLVSTATSRPRALPRPA
TTQEPDIPERSTLPLGTTAPGPTEVAQTPTPETFLTTIRDEPEVPVSGGPSGDFELPEEE
TTQPDTANEVVAVGGAAAKASSPPGTLPKGARPGPGLLDNAIDSGSSAAQLPQKSILERK
EVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYTLEEPKQASVTYQKPDKQEEFYA

>gi568815597r:30833214_31159566|GENSCAN_predicted_CDS_3|1620_bp
atggggcccccgggaatggaggaaaagaggatggaatttgtacgtgctgaccacgttgtt
cctcggagactcctgggccccaggagcgggcaacccttgccgtgtttgctggcagtgacc
gtcatggagcctggagacagactcctagaggcacctgctggccctcagcagcagcaggca
gaggtctctagagtgccctgggaacgctcagcggctcccctgggacctgatgctcaggcc
ttcatgggccgcttgcggagcctctgctgggtgtcccctcccgagatcagtggtggccgg
aagcagaaggttcagtgcttccaccgggcacgctcgctttcccccgtgatctctccctct
cctgtaccaccccatctctgtggggagctgcagctcctggtcgttagcatggagaagatg
gtcgtcatggcccagcgctggcgcagtgagaacttcgagagacccgtggacctggagggc
tctggggatgatgactcctttcccgatgatgaactggatgacctctactcggggtcgggc
tcgggctacttcgagcaggagtcgggcattgagacagccatgcgcttcagcccagatgta
gccctggcggtgtccaccacacctgcggtgctgcccaccacgaacatccagcctgtgggc
acaccatttgaagagctcccctctgagcgccccaccctggagccagccaccagccccctg
gtggtgacagaagtcccggaagagcccagccagagagccaccaccgtctccactaccatg
gctaccactgctgccacaagcacaggggacccgactgtggccacagtgcctgccacagtg
gccaccgccacccccagcacccctgcagcacccccttttacggccaccactgctgttata
aggaccactggcgtacggaggcttctgcctctcccactgaccacagtggctacggcacgg
gccactacccccgaggcgccctccccgcccaccacggcggctgtcttggacaccgaggcc
ccaacacccaggctggtcagcacagctacctcccggccaagagcccttcccaggccggcc
accacccaggagcctgacatccctgagaggagcaccctgcccctggggaccactgcccct
ggacccacagaggtggctcagaccccaactccagagaccttcctgaccacaatccgggat
gagccagaggttccggtgagtggggggcccagtggagacttcgagctgccagaagaagag
accacacaaccagacacagccaatgaggtggtagctgtgggaggggctgcggccaaggca
tcatctccacctgggacactgcccaagggtgcccgcccgggccctggcctcctggacaat
gccatcgactcgggcagctcagctgctcagctgcctcagaagagtatcctggagcggaag
gaggtgctcgtagctgtgattgtgggcggggtggtgggcgccctctttgctgccttcttg
gtcacactgctcatctatcgtatgaagaaaaaggatgagggcagctacacgctggaggaa
cccaagcaggcgagcgtcacataccagaagcctgacaagcaggaggagttctatgcctag

>gi568815597r:30833214_31159566|GENSCAN_predicted_peptide_4|99_aa
MKPGPPHRAGAAHGAGAGAGAAAGPGARGLLLPPLLLLLLAGRAAGAWMPLLGGVCSCIL
PGSCLQDAPCVRETDTSTDDDEEDDEKDNGQYLLLHVMC

>gi568815597r:30833214_31159566|GENSCAN_predicted_CDS_4|300_bp
atgaagccggggccgccgcaccgtgccggggccgcccacggggccggcgccggggccggg
gccgcggccgggcccggggcccgcgggctgctcctgccaccgctgctgctgctgctgctg
gcggggcgcgccgcgggggcctggatgccattgttggggggtgtctgcagctgcatctta
cctggttcctgccttcaagatgctccctgtgtcagggagacagacacaagcacagatgat
gacgaggaagatgatgagaaagataacggccaatacttactgctgcatgtcatgtgctag

>gi568815597r:30833214_31159566|GENSCAN_predicted_peptide_5|1000_aa
MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGKGERERQREKIGGLKSIFILPLRPGSM
VSSLGEEEVEEAAIIIANIDGLLGITFMQNISSSCQVKSFGKQMNPAKMDQKEYSWVING
ETVPGEHQGPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADV
KDFSRTPGNCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEH
VGMEPLQFDYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAA
HQPHIGMFSAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWG
VYPASLFQQQAAAAAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPL
VAAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPV
IISSSAAQAAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNNNLASSSFYG
NNSLNSNSQSSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAGGLTNGSGRYIS
AAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQL
REIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFF
EFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK
DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL
EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCV
THASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRP
HIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII

>gi568815597r:30833214_31159566|GENSCAN_predicted_CDS_5|3003_bp
atgccgctgccaccgccggggccggggccggagcctatcccaggatgcaccgcgccaacc
cagtccccagtgggccgccatgttgtcggagtgaaaggtaagggggagcgagagcgccag
agagagaagatcggggggctgaaatccatcttcatcctaccgctccgcccaggcagcatg
gtgagcagcttgggggaggaggaagtggaggaggcggctataataatagcaaacatcgat
ggcctactggggataacattcatgcagaacatcagcagctcttgccaggtaaaaagtttt
gggaaacagatgaatccagcaaagatggaccaaaaggaatattcctgggtgatcaatggc
gagacagtgcctggggaacatcagggcccaagggatgcagacagtgatgaaaacgacaaa
ggtgaaaagaagaacaagggtacgtttgatggagataagctaggagatttgaaggaggag
ggtgatgtgatggacaagaccaatggtttaccagtgcagaatgggattgatgcagacgtc
aaagattttagccgtacccctggtaattgccagaactctgctaatgaagtggatcttctg
ggtccaaaccagaatggttctgagggcttagcccagctgaccagcaccaatggtgccaag
cctgtggaggatttctccaacatggagtcccagagtgtccccttggaccccatggaacat
gtgggcatggagcctcttcagtttgattattcaggcacgcaggtacctgtggactcagca
gcagcaactgtgggactttttgactacaattctcaacaacagctgttccaaagacctaat
gcgcttgctgtccagcagttgacagctgctcagcagcagcagtatgcactggcagctgct
catcagccgcacatcggtatgttttcagcaggtttagctcccgctgcgtttgtccccaat
ccatacatcatcagcgctgctcccccagggacggacccctacacagctggattggctgca
gcagcgacactaggcccagctgtggtccctcaccagtattatggagttactccctgggga
gtctaccctgccagtcttttccagcagcaagctgccgctgccgctgcagcaactaattca
gctaatcaacagaccaccccacaggctcagcaaggacagcagcaggttctccgtggagga
gccagccaacgtcctttgaccccaaaccagaaccagcagggacagcaaacggatcccctt
gtggcagctgcagcagtgaattctgcccttgcatttggacaaggtctggcagcaggcatg
ccaggttatccggtgttggctcctgctgcttactatgaccaaactggtgcccttgtagtg
aatgcaggcgcgagaaatggtcttggagctcctgttcgacttgtagctcctgccccagtc
atcattagttcctcagctgcacaagcagctgttgcagcagccgcagcttcagcaaatgga
gcagctggtggtcttgctggaacaacaaatggaccatttcgccctttaggaacacagcag
cctcagccccagccccagcagcagcccaataacaacctggcatccagttctttctacggc
aacaactctctgaacagcaattcacagagcagctccctcttctcccagggctctgcccag
cctgccaacacatccttgggattcggaagtagcagttctctcggcgccaccctgggatcc
gcccttggagggtttggaacagcaggaggactcacgaatggcagtggaagatacatctct
gctgctccaggcgctgaagccaagtaccgcagtgcaagcagcgcctccagcctcttcagc
ccgagcagcactcttttctcttcctctcgtttgcgatatggaatgtctgatgtcatgcct
tctggcaggagcaggcttttggaagattttcgaaacaaccggtaccccaatttacaactg
cgggagattgctggacatataatggaattttcccaagaccagcatgggtccagattcatt
cagctgaaactggagcgtgccacaccagctgagcgccagcttgtcttcaatgaaatcctc
caggctgcctaccaactcatggtggatgtgtttggtaattacgtcattcagaagttcttt
gaatttggcagtcttgaacagaagctggctttggcagaacggattcgaggccacgtcctg
tcattggcactacagatgtatggctgccgtgttatccagaaagctcttgagtttattcct
tcagaccagcagaatgagatggttcgggaactagatggccatgtcttgaagtgtgtgaaa
gatcagaatggcaatcacgtggttcagaaatgcattgaatgtgtacagccccagtctttg
caatttatcatcgatgcgtttaagggacaggtatttgccttatccacacatccttatggc
tgccgagtgattcagagaatcctggagcactgtctccctgaccagacactccctatttta
gaggagcttcaccagcacacagagcagcttgtacaggatcaatatggaaattatgtaatc
caacatgtactggagcacggtcgtcctgaggataaaagcaaaattgtagcagaaatccga
ggcaatgtacttgtattgagtcagcacaaatttgcaagcaatgttgtggagaagtgtgtt
actcacgcctcacgtacggagcgcgctgtgctcatcgatgaggtgtgcaccatgaacgac
ggtccccacagtgccttatacaccatgatgaaggaccagtatgccaactacgtggtccag
aagatgattgacgtggcggagccaggccagcggaagatcgtcatgcataagatccggccc
cacatcgcaactcttcgtaagtacacctatggcaagcacattctggccaagctggagaag
tactacatgaagaacggtgttgacttagggcccatctgtggcccccctaatggtatcatc
tga

>gi568815597r:30833214_31159566|GENSCAN_predicted_peptide_6|83_aa
MGLKAMELDDSASKGNIAAVGKDFVNNELTRESGFILLPREATLTQQKAGKLIHSKKKGD
GYVDTENKFLKLVAAIKAALAQG

>gi568815597r:30833214_31159566|GENSCAN_predicted_CDS_6|252_bp
atgggattgaaagccatggaattggatgacagtgcctccaaagggaatatagctgctgtg
ggaaaggacttcgtgaacaatgagttgaccagagagtcgggcttcatcctactgcccaga
gaggccaccttgactcagcagaaagctgggaagttgattcactctaagaagaaaggtgat
ggctatgtggacacagaaaacaagtttctgaagctggtggctgccatcaaagctgccttg
gctcagggctaa