GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:16:35

Sequence gi568815577r:14273620_14481545 : 207926 bp : 36.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    419    538  120  1  0   36  103   101 0.354   6.17
 1.02 Intr +    601    734  134  0  2    1   73   124 0.415   0.72
 1.03 Intr +  13931  14078  148  2  1   99   86    64 0.844   6.62
 1.04 Intr +  15446  15564  119  1  2  107   53    88 0.878   5.54
 1.05 Intr +  17951  18128  178  2  1   59   93    52 0.095   1.80
 1.06 Intr +  22610  22762  153  1  0   67  101    65 0.151   5.05
 1.07 Intr +  25819  25976  158  0  2  118  -23   110 0.135   0.79
 1.08 Intr +  30570  30741  172  0  1   50   97    48 0.230   0.92
 1.09 Intr +  34752  34836   85  2  1   56   60    78 0.504   0.27
 1.10 Intr +  34934  35000   67  0  1   98   89    11 0.506  -0.76
 1.11 Intr +  35987  36053   67  2  1   68  117    35 0.698   2.39
 1.12 Intr +  39325  39501  177  0  0   98   61   190 0.967  16.49
 1.13 Intr +  42582  42749  168  2  0  104   35   159 0.859  11.42
 1.14 Intr +  43854  44016  163  2  1   58  116    63 0.836   4.73
 1.15 Intr +  46362  46571  210  1  0   85   40    86 0.281   1.46
 1.16 Intr +  49893  49968   76  1  1   99   95    39 0.417   3.35
 1.17 Intr +  63561  63621   61  0  1   60   86    49 0.113  -0.28
 1.18 Intr +  64162  64251   90  0  0   58   85    69 0.220   2.87
 1.19 Intr +  71644  71691   48  0  0   65  121    55 0.451   4.46
 1.20 Intr +  79010  79209  200  1  2   55   95   120 0.965   6.63
 1.21 Intr +  79935  80061  127  0  1   82  101    63 0.995   6.76
 1.22 Intr +  81422  81523  102  1  0   93   74    92 0.992   7.75
 1.23 Intr +  84112  84255  144  0  0   58   64   137 0.896   7.86
 1.24 Term +  96728  96790   63  1  0   80   40    68 0.039  -1.89
 1.25 PlyA +  97854  97859    6                               1.05

 2.09 PlyA -  97933  97928    6                               1.05
 2.08 Term - 100665  99998  668  1  2   79   38   771 0.998  64.20
 2.07 Intr - 102200 102033  168  0  0   76   99   158 0.995  14.70
 2.06 Intr - 104793 104580  214  0  1   75   92   227 0.997  19.17
 2.05 Intr - 107924 107584  341  0  2   93  115   255 0.827  22.97
 2.04 Intr - 109605 109476  130  0  1   27   80    62 0.421  -1.35
 2.03 Intr - 109812 109637  176  1  2   16   37   156 0.114   2.04
 2.02 Intr - 133501 133420   82  1  1   39   77    65 0.085  -1.21
 2.01 Init - 133904 133764  141  2  0   93   37    68 0.661   2.38
 2.00 Prom - 134496 134457   40                              -3.45

 3.00 Prom + 136433 136472   40                              -4.35
 3.01 Sngl + 140825 141046  222  1  0   31   44   224 0.775   7.20
 3.02 PlyA + 141449 141454    6                               1.05

 4.05 PlyA - 141862 141857    6                               1.05
 4.04 Term - 143684 143387  298  1  1   -2   49   245 0.073   5.35
 4.03 Intr - 147107 146945  163  0  1   70   30   132 0.053   3.71
 4.02 Intr - 163975 163958   18  2  0  121   80    19 0.029   0.06
 4.01 Init - 171715 171676   40  1  1   76  116    25 0.391   4.50
 4.00 Prom - 180558 180519   40                              -5.45

 5.04 PlyA - 181017 181012    6                               1.05
 5.03 Term - 193034 192907  128  0  2   40   44   129 0.803   1.16
 5.02 Intr - 196067 195888  180  0  0   58   72    99 0.407   4.22
 5.01 Intr - 199602 199502  101  2  2   75   38   145 0.314   7.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577r:14273620_14481545|GENSCAN_predicted_peptide_1|1009_aa
GSDSRSRALSQRPGAPRTMLSSTQNAGGSYQRVRGALDTQEWKWGEVSPRTLNVDGRALV
SVANTHGTDRPAYTLNPQSRDQRSGVITLGYKRPLEREDLFELKESDSFCTACPIFEKQW
RKEVLRNQERQKVKALNKLDEALCPGIILTQSTDSNANLFQKQPHRHTQTSGRWQIIIFC
EHSSDFGWNGYGYAVALLVVVFLQTLILQQYQRFNMLTSAKVKTAVNGLIYKKLGWSGKV
SWLILHDVGHGIMEGYIAWGKGSDVRITWEKKSTEMRTRPAQKMALLLSNVSRQKFSTGE
IINLMSATHGLDSKPQSPLVCPFSNPNGRISPLARAGLADHYRVTHLQILKLYAWEPSYK
NKIIKIRDQELEFQKSARYLTVFSMLTLTCIPFLTKISLGRLEDFLNTEELLPQSIETNY
TGDHAIGFTDASFSWDKTGMPVLKESIRIRIEQVLNQLSLFETVDYPGSVAYVSQQAWIQ
NCILQENILFGSIMKKEFYEQVLEACALLPDLEQLPKGDQTEIGERAVNISGGQQHRVSL
ARAVYSGADVYLLDDPLSAIDVHVGKQLFEKVIGSLGLLKNRTHILVTHNLTLLPQMNLI
VVMKSGRIAQMGIYQELLCKTKNLTNLHQVISEQEKGGRVGRVWTWQLRYLQMYRASESA
KWSLGGGEEQQKPWLRLTHQGLPCPPEEVSGIQTFSSDPCLPGGLEAHALKQVSAINSRT
RPKDKILEQKHRPSLDQGKQLSMKKEKIPVGGLKFSIILQYLQAFGWLWVWLTVVTYLGQ
NLFFETNSTGQIISRFTKRYYVASSRQIRRLTGGSRSPVISHFSETLSGVSTIRAFGHEQ
RFIQQYKEMVNEDLVCFYNNVIFNLWLSVRLEFLGNLMVLFAALLAVLAGNSIDSAIVGL
SVSYALNITHSLNFWVKKACEIETNAVAVERVCEYENMDKESPWIMSRRPPLQWPNKGIV
EFINYQARYQDDLGLALQDITFQTHGEEKLGSKRESQQEGASKKEADLF

>gi568815577r:14273620_14481545|GENSCAN_predicted_CDS_1|3030_bp
ggaagtgacagccgcagccgggctctcagccagcggccaggcgccccgcggaccatgctc
tccagtacgcagaacgcgggcggctcctatcagcgggtccgcggggcgcttgatacacag
gagtggaagtggggagaggtgagtcctcgaaccctgaacgtggacggacgagcccttgtt
tcagtagccaacacacacgggacagacagaccggcgtacacactcaatcctcagagcaga
gatcagagatcaggagtaattactttaggctataagagacctttggaaagagaggatctt
tttgaactaaaggaaagtgattccttctgcactgcgtgtcccatctttgaaaaacaatgg
agaaaggaagttttaaggaatcaagagaggcaaaaagtaaaggccctcaacaaattggat
gaggcactatgccctgggatcatccttactcagtctactgattcaaatgctaatctcttc
cagaaacagcctcacagacacacccagacatctggtagatggcaaattatcattttctgt
gaacacagctcagattttggctggaatggctatggctatgcagtggcacttcttgttgta
gtctttttgcaaactctgattcttcagcaatatcaacgttttaacatgctcacctcagca
aaagttaagacagctgtaaatggactgatctacaaaaagctaggatggtcaggaaaagtg
tcatggttaatattgcatgatgtgggtcatggaataatggaaggatacattgcatggggt
aaaggctctgatgttagaataacttgggagaaaaaaagtacagaaatgcgtacaaggcct
gctcagaaaatggccttacttttatcaaatgtttctcgacaaaagttttccactggggaa
attattaacttgatgtcagcaactcatggacttgacagcaaacctcaatctcctctggtc
tgccccttttcaaatcctaatggccgtatatctcctttggcaagagctggattggcagat
cattatcgtgtgactcatttacagatcctcaaactttatgcatgggaaccctcctataaa
aataagattatcaaaattcgagatcaggaattggaatttcaaaaatcagctaggtatctt
actgtattttccatgttgacattaacctgcattccattcttgacaaagatatccctgggc
cgtttggaagactttctcaacactgaggagcttcttcctcaaagtattgaaacgaactat
acaggagatcatgctattgggtttacagatgcttctttctcctgggataaaacaggaatg
ccagttctaaaagagtcaataagaataagaattgaacaagttcttaatcagctttctctt
tttgaaacagtagactacccgggctctgtggcttatgtttctcagcaggcctggattcag
aattgcattttgcaagaaaacattctctttggctccatcatgaagaaagagttttatgag
caagtattggaagcctgtgctctccttccagatttggagcagttgccaaagggagatcaa
actgagattggagaaagagctgtgaatataagtgggggccagcagcatcgagtaagcctg
gccagagctgtctacagtggggccgacgtctacctcctggatgatcccttgtctgctatt
gatgttcatgttggaaagcagctttttgaaaaagtgatagggtccttgggccttttgaaa
aaccggactcatattttagtgacacacaatctcacacttctgccacaaatgaatcttatt
gttgtaatgaaaagtggcagaatagctcaaatgggaatataccaggagctgctgtgtaaa
accaaaaatctcactaatttgcaccaagtcatcagtgaacaagaaaaaggtgggagagtg
ggaagagtctggacgtggcagctgaggtatctgcagatgtacagagcttctgagagtgca
aagtggagcttgggagggggagaagagcagcaaaagccttggctgagactgactcatcaa
ggactgccatgtcccccagaggaagtctcaggaatccagacattctcatcagatccttgc
cttccaggtggcttggaagctcatgctctaaagcaagtcagtgcaatcaactccagaact
agaccaaaagacaaaatcctggagcaaaaacataggccctcattggatcaaggaaaacag
ctctcaatgaaaaaagaaaagatccctgttggtgggttgaagttctccatcattctgcag
tacctccaagcctttggctggctctgggtgtggctgactgtggtcacttacttagggcag
aatttgttttttgaaacaaattccacaggccagatcatcagtcgtttcaccaagagatac
tatgtggcaagctctcggcaaatccggaggttgacaggagggtcccgttctcctgtcatt
tctcactttagtgagactttatcaggagtgtccaccatcagagcatttggacatgaacag
aggtttatccagcaatacaaagagatggtgaatgaagacttggtctgtttctacaataat
gtaattttcaacctgtggctgtctgttagacttgaatttcttggcaacttaatggtgctt
tttgctgcactgcttgctgtgctggctggcaattctatagattcagcaatagttggtttg
tctgtatcctatgccctaaatataactcattctctgaatttttgggtgaagaaagcatgt
gaaattgaaaccaatgcagttgctgttgaaagagtttgtgaatatgaaaatatggataaa
gaatcaccttggataatgtctagaagacctccattacaatggcccaataaaggtatagtg
gaatttattaattatcaggctcgataccaagatgatcttggtttagcgttgcaagatatc
actttccagactcatggggaagagaagctgggatccaaaagagaaagccagcaagagggt
gcatccaagaaggaagctgatcttttttaa

>gi568815577r:14273620_14481545|GENSCAN_predicted_peptide_2|639_aa
MEEGTEGAGKDFSSSSPQAQTTKAKMHKWEFKSKLKSFCTAKETINKLKWLSPKGQAITN
AGEDMEKREPSYTVGSRDHRFDYKRQSLATALLPLSLTGPAGRCVEGGLSRHWQRLNGGS
LPRALTVDEVLALSKRTTFPRGLRDCREEWGRCLTSGTVITSLFGGTVMAREMTILGSAV
LTLLLAGYLAQQYLPLPTPKVIGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVS
FTDNDVYVGYESVELADSNPQNTIYDAKRFIGKIFTAEELEAEIGRYPFKVLNKNGMVEF
SVTSNETITVSPEYVGSRLLLKLKEMAEAYLGMPVANAVISVPAEFDLKQRNSTIEAANL
AGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNN
KLGGQDFNQRLLQYLYKQIYQTYGFVPSRKEEIHRLRQAVEMVKLNLTLHQSAQLSVLLT
VEEQDRKEPHSSDTELPKDKLSSADDHRVNSGFGRGLSDKKSGESQVLFETEISRKLFDT
LNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDP
DLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN

>gi568815577r:14273620_14481545|GENSCAN_predicted_CDS_2|1920_bp
atggaggaaggcacagagggagcaggcaaagatttttcgagtagtagtccacaagcacag
acaaccaaagcaaaaatgcacaaatgggagtttaaaagcaagttaaaaagcttctgcaca
gcaaaagaaacaatcaacaaattaaaatggctttcacctaaaggacaggcaataacaaat
gctggtgaggacatggagaaaagggaaccctcatacactgttggatcgcgggaccacagg
tttgattataaacgccagtctctcgccacggcgctcctccccctcagtctcactggtcct
gccggccgttgcgtggaagggggactcagtcgtcactggcagcggttgaatggaggctct
ttgccccgcgccctcacggtagatgaagtccttgctttgagcaagcggactacatttccc
agggggctgcgggactgccgggaggagtgggggcggtgcctcacgtctggtacagtcatc
acaagcctgttcggcgggactgtgatggccagagagatgacgatcttaggatcggctgtt
ttgactctcctgttggccggctatttggcacaacagtatttaccattgcctactcctaaa
gtgattggtattgatcttggcaccacctattgttctgttggggtgttttttcctggcaca
ggaaaagtaaaggtgattccagatgaaaatgggcatatcagcatacccagcatggtgtct
tttactgacaatgatgtatatgtgggatatgaaagcgtagagctggcagattcaaatcct
caaaacacaatatatgatgccaaaagattcataggcaagatttttaccgcagaagagttg
gaggctgaaattggcagatacccatttaaggttttaaacaaaaatggaatggttgagttt
tctgtgacaagtaatgagaccatcacagtgtccccagaatatgttggctctcgactattg
ttgaagttaaaggaaatggcagaggcatatcttggaatgccagttgccaatgctgtcatt
tctgtaccagcagaatttgatctaaaacagagaaattcaacaattgaagctgctaacctt
gcaggactgaagattttgagggtaataaatgaacccacagcagcagctatggcctatggt
ctccacaaggctgacgtcttccacgtcttggtgatagacttgggcggaggaactctagat
gtgtctttactgaataaacaaggagggatgtttctaacccgagcaatgtctggaaacaat
aaacttggaggacaggacttcaatcagagattgcttcagtacttatataaacagatctat
caaacatatggcttcgtgccctctaggaaagaggaaatccacagattgagacaagctgtg
gaaatggtcaaattaaatctgactcttcatcaatctgctcagttgtcagtattactaacg
gtggaggagcaggacaggaaggaacctcacagtagtgacactgaactgccaaaagacaaa
ctttcctcagcagatgaccatcgcgtgaacagtgggtttggacgtggcctttctgataag
aaaagtggagaaagtcaggttttatttgaaacagaaatatcacggaaactctttgatacc
cttaatgaagacctctttcagaaaatactggtacccattcagcaagtattgaaagaaggc
cacctggaaaagactgagattgatgaggtggttttagttgggggctccactcgtattcct
cggatccgtcaagtcattcaagagttctttggaaaagatcccaacacatctgtagaccct
gacctagcagtagtaacgggagtggctatccaagcagggattgatggaggctcttggcct
ctccaagtcagtgctttagaaattcccaataagcatttacaaaaaaccaacttcaactga

>gi568815577r:14273620_14481545|GENSCAN_predicted_peptide_3|73_aa
MFSPGFTLIQYDCCLHKAGSLDTGMHREDDVKTQKEEPSPTKEKGLKHILPSQLSERNNP
VDILISDFQPPEP

>gi568815577r:14273620_14481545|GENSCAN_predicted_CDS_3|222_bp
atgttttcaccagggttcaccctcatccagtatgactgctgccttcataaagcaggatct
ttggacacaggcatgcacagggaagatgatgtgaagacacagaaagaagagccatctcca
accaaggagaaaggcctgaaacacatccttccctcacagctctcagaaagaaacaatcct
gttgacatcttgatttcagacttccagcctccagaaccatga

>gi568815577r:14273620_14481545|GENSCAN_predicted_peptide_4|172_aa
MSLEWGEQEEAVKGLSKPAGRGVSLCRHYHPKSQGVLPDYCQCSHKAQGLLSQLVVNAAW
TLFGEVGSPLVQGSDLGFRVGMAPQQLCPKGQGTVAVRPMELWGTAVAQALRAKCSTVVT
PVSVKAEYCHRKGYEGWSSVVLSPLVCQDTVGTLALRGMVQQQHDPRMDTTL

>gi568815577r:14273620_14481545|GENSCAN_predicted_CDS_4|519_bp
atgagcctggaatggggtgagcaagaagaggctgtaaaaggtttatctaaacccgcaggc
agaggagtttcactctgtaggcactaccaccccaagtcacagggagtactgccagactac
tgccaatgttcccataaggcccaaggtctcttaagtcagcttgttgtaaatgctgcctgg
actctcttcggggaagtgggctcccctctggtccagggcagtgacttaggcttcagggtt
ggtatggctccacagcagctctgccccaaaggccagggcacagtggcagtaaggcccatg
gaattgtggggtacagctgtagctcaggccctgagagccaagtgcagcacggtggtgact
ccagtctctgtgaaggcagagtattgccacagaaagggctacgaaggatggagctcagtt
gtgctaagccccctggtatgtcaggacacagtgggaactctggctctgaggggcatggta
cagcagcaacatgaccccaggatggacacgaccctgtag

>gi568815577r:14273620_14481545|GENSCAN_predicted_peptide_5|136_aa
XMSAFMGKSRSSTYWICLIKHNRRYVTGSYWNVLWCRRDLQGSSGACPLTKPPLINSTIQ
KVHLDKGSSKDMPMTLSCQMVYMSKVSLRECEASRMCTSAEKTWEGLNLSPVDKSEALHK
QETKAKEEFSNCLLEC

>gi568815577r:14273620_14481545|GENSCAN_predicted_CDS_5|411_bp
nnaatgtcagcatttatgggaaaaagtcgatcaagtacttactggatctgcttaatcaag
cataatcgtcgctatgtgactggcagttattggaacgtcctgtggtgcagaagagatctt
cagggcagcagtggggcctgcccgcttacaaagcccccattgatcaacagtaccatccaa
aaagtccacttagacaaggggtcatccaaggacatgccaatgactctttcttgccaaatg
gtgtacatgagcaaagtgtctctgagagaatgcgaagcctccaggatgtgcacaagcgca
gaaaagacctgggaaggccttaatctctcacctgtggataagtctgaggctttgcacaag
caggaaacgaaggctaaagaagagttttcaaactgcctgctggagtgttga